Construction of a reference linkage map for melon
A map of melon (Cucumis melo L.) with 411 markers (234 RFLPs, 94 AFLPs, 47 RAPDs, 29 SSRs, five inter-SSRs, and two isozymes) and one morphological trait (carpel number) was constructed using the F2 progeny of a cross between the Korean accession PI161375 and the Spanish melon type 'Pinyonet Pi...
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| Veröffentlicht in: | Genome 2001-10, Vol.44 (5), p.836-845 |
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| creator | Oliver, M Garcia-Mas, J Cardus, M Pueyo, N Lopez-Sese, A.I Arroyo, M Gomez-Paniagua, H Arus, P Vicente, M.C. de |
| description | A map of melon (Cucumis melo L.) with 411 markers (234 RFLPs, 94 AFLPs, 47 RAPDs, 29 SSRs, five inter-SSRs, and two isozymes) and one morphological trait (carpel number) was constructed using the F2 progeny of a cross between the Korean accession PI161375 and the Spanish melon type 'Pinyonet Piel de Sapo'. RFLPs were obtained using 212 probes from different genomic and cDNA melon libraries, including 16 Arabidopsis ESTs, 13 Cucumis known genes, and three resistant gene homologues. Most loci (391) mapped to 12 major linkage groups, spanning a total genetic distance of 1197 cM, with an average map interval of 3 cM/marker. The remaining 21 loci (six RAPDs and 15 AFLPs) were not linked. A majority (66%) of the markers were codominant (RFLPs, SSRs, and isozymes), making them easily transferable to other melon crosses. Such markers can be used as a reference, to merge other melon and cucumber maps already constructed. Indeed, some of them (23 SSRs, 14 RFLPs, one isozyme, and one morphological trait) could act as anchor points with other published cucurbit maps. |
| doi_str_mv | 10.1139/g01-073 |
| format | Article |
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RFLPs were obtained using 212 probes from different genomic and cDNA melon libraries, including 16 Arabidopsis ESTs, 13 Cucumis known genes, and three resistant gene homologues. Most loci (391) mapped to 12 major linkage groups, spanning a total genetic distance of 1197 cM, with an average map interval of 3 cM/marker. The remaining 21 loci (six RAPDs and 15 AFLPs) were not linked. A majority (66%) of the markers were codominant (RFLPs, SSRs, and isozymes), making them easily transferable to other melon crosses. Such markers can be used as a reference, to merge other melon and cucumber maps already constructed. Indeed, some of them (23 SSRs, 14 RFLPs, one isozyme, and one morphological trait) could act as anchor points with other published cucurbit maps.</description><identifier>ISSN: 0831-2796</identifier><identifier>EISSN: 1480-3321</identifier><identifier>DOI: 10.1139/g01-073</identifier><identifier>PMID: 11681608</identifier><identifier>CODEN: GENOE3</identifier><language>eng</language><publisher>Ottawa, Canada: NRC Research Press</publisher><subject>alleles ; amplified fragment length polymorphism ; Arabidopsis ; Chromosome Mapping ; Cucumis melo ; Cucumis melo - enzymology ; Cucumis melo - genetics ; DNA Probes ; Flowers & plants ; Fruits ; genetic distance ; genetic markers ; Genetics ; Isoenzymes - genetics ; linkage (genetics) ; loci ; Melons ; microsatellite repeats ; Polymorphism, Genetic ; Polymorphism, Restriction Fragment Length ; Probes ; R&D ; Random Amplified Polymorphic DNA Technique ; Repetitive Sequences, Nucleic Acid ; Research & development ; restriction fragment length polymorphism</subject><ispartof>Genome, 2001-10, Vol.44 (5), p.836-845</ispartof><rights>Copyright National Research Council of Canada Oct 2001</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c406t-ebcf5511334cede2c1b31d6ed4672f5214c73767530a6223157e12a4bfdab8093</citedby><cites>FETCH-LOGICAL-c406t-ebcf5511334cede2c1b31d6ed4672f5214c73767530a6223157e12a4bfdab8093</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://cdnsciencepub.com/doi/pdf/10.1139/g01-073$$EPDF$$P50$$Gnrcresearch$$H</linktopdf><linktohtml>$$Uhttps://cdnsciencepub.com/doi/full/10.1139/g01-073$$EHTML$$P50$$Gnrcresearch$$H</linktohtml><link.rule.ids>314,776,780,2918,27903,27904,64404,64982</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/11681608$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Oliver, M</creatorcontrib><creatorcontrib>Garcia-Mas, J</creatorcontrib><creatorcontrib>Cardus, M</creatorcontrib><creatorcontrib>Pueyo, N</creatorcontrib><creatorcontrib>Lopez-Sese, A.I</creatorcontrib><creatorcontrib>Arroyo, M</creatorcontrib><creatorcontrib>Gomez-Paniagua, H</creatorcontrib><creatorcontrib>Arus, P</creatorcontrib><creatorcontrib>Vicente, M.C. de</creatorcontrib><title>Construction of a reference linkage map for melon</title><title>Genome</title><addtitle>Génome</addtitle><description>A map of melon (Cucumis melo L.) with 411 markers (234 RFLPs, 94 AFLPs, 47 RAPDs, 29 SSRs, five inter-SSRs, and two isozymes) and one morphological trait (carpel number) was constructed using the F2 progeny of a cross between the Korean accession PI161375 and the Spanish melon type 'Pinyonet Piel de Sapo'. RFLPs were obtained using 212 probes from different genomic and cDNA melon libraries, including 16 Arabidopsis ESTs, 13 Cucumis known genes, and three resistant gene homologues. Most loci (391) mapped to 12 major linkage groups, spanning a total genetic distance of 1197 cM, with an average map interval of 3 cM/marker. The remaining 21 loci (six RAPDs and 15 AFLPs) were not linked. A majority (66%) of the markers were codominant (RFLPs, SSRs, and isozymes), making them easily transferable to other melon crosses. Such markers can be used as a reference, to merge other melon and cucumber maps already constructed. Indeed, some of them (23 SSRs, 14 RFLPs, one isozyme, and one morphological trait) could act as anchor points with other published cucurbit maps.</description><subject>alleles</subject><subject>amplified fragment length polymorphism</subject><subject>Arabidopsis</subject><subject>Chromosome Mapping</subject><subject>Cucumis melo</subject><subject>Cucumis melo - enzymology</subject><subject>Cucumis melo - genetics</subject><subject>DNA Probes</subject><subject>Flowers & plants</subject><subject>Fruits</subject><subject>genetic distance</subject><subject>genetic markers</subject><subject>Genetics</subject><subject>Isoenzymes - genetics</subject><subject>linkage (genetics)</subject><subject>loci</subject><subject>Melons</subject><subject>microsatellite repeats</subject><subject>Polymorphism, Genetic</subject><subject>Polymorphism, Restriction Fragment Length</subject><subject>Probes</subject><subject>R&D</subject><subject>Random Amplified Polymorphic DNA Technique</subject><subject>Repetitive Sequences, Nucleic Acid</subject><subject>Research & development</subject><subject>restriction fragment length polymorphism</subject><issn>0831-2796</issn><issn>1480-3321</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2001</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>8G5</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><sourceid>GUQSH</sourceid><sourceid>M2O</sourceid><recordid>eNqF0MFu1DAQBmCrAtGlIN4AIg4gVQrMeBI7OaIVLZUqcWh7thxnvKRN4sXeHPr2GO2qlahQT758_mfmF-IdwhdEar9uAEvQdCRWWDVQEkl8IVbQEJZSt-pYvE7pFgCBWnwljhFVgwqalcB1mNMuLm43hLkIvrBFZM-RZ8fFOMx3dsPFZLeFD7GYeAzzG_HS2zHx28N7Im7Ovl-vf5SXP88v1t8uS1eB2pXcOV_XeTmqHPcsHXaEveK-Ulr6WmLlNGmlawKrpCSsNaO0Ved72zXQ0on4tM_dxvB74bQz05Acj6OdOSzJ6PxJtnXzLMQGoWqozvDjP_A2LHHORxgpoc5pRBl93iMXQ0q5C7ONw2TjvUEwf7s2uWuTu87y_SFu6SbuH92h3MfF5ugiJ7bR_XpQhxSz7X2Gp_-HT8d-2GNvg7GbOCRzcyUBCWQrNVSK_gB65Jqa</recordid><startdate>200110</startdate><enddate>200110</enddate><creator>Oliver, M</creator><creator>Garcia-Mas, J</creator><creator>Cardus, M</creator><creator>Pueyo, N</creator><creator>Lopez-Sese, A.I</creator><creator>Arroyo, M</creator><creator>Gomez-Paniagua, H</creator><creator>Arus, P</creator><creator>Vicente, M.C. de</creator><general>NRC Research Press</general><general>Canadian Science Publishing NRC Research Press</general><scope>FBQ</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7SS</scope><scope>7TK</scope><scope>7TM</scope><scope>7U9</scope><scope>7X2</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>88I</scope><scope>8AF</scope><scope>8AO</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>8FQ</scope><scope>8FV</scope><scope>8G5</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>GUQSH</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0K</scope><scope>M0S</scope><scope>M1P</scope><scope>M2O</scope><scope>M2P</scope><scope>M3G</scope><scope>M7P</scope><scope>MBDVC</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>Q9U</scope><scope>RC3</scope><scope>7X8</scope></search><sort><creationdate>200110</creationdate><title>Construction of a reference linkage map for melon</title><author>Oliver, M ; Garcia-Mas, J ; Cardus, M ; Pueyo, N ; Lopez-Sese, A.I ; Arroyo, M ; Gomez-Paniagua, H ; Arus, P ; Vicente, M.C. de</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c406t-ebcf5511334cede2c1b31d6ed4672f5214c73767530a6223157e12a4bfdab8093</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2001</creationdate><topic>alleles</topic><topic>amplified fragment length polymorphism</topic><topic>Arabidopsis</topic><topic>Chromosome Mapping</topic><topic>Cucumis melo</topic><topic>Cucumis melo - enzymology</topic><topic>Cucumis melo - genetics</topic><topic>DNA Probes</topic><topic>Flowers & plants</topic><topic>Fruits</topic><topic>genetic distance</topic><topic>genetic markers</topic><topic>Genetics</topic><topic>Isoenzymes - genetics</topic><topic>linkage (genetics)</topic><topic>loci</topic><topic>Melons</topic><topic>microsatellite repeats</topic><topic>Polymorphism, Genetic</topic><topic>Polymorphism, Restriction Fragment Length</topic><topic>Probes</topic><topic>R&D</topic><topic>Random Amplified Polymorphic DNA Technique</topic><topic>Repetitive Sequences, Nucleic Acid</topic><topic>Research & development</topic><topic>restriction fragment length polymorphism</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Oliver, M</creatorcontrib><creatorcontrib>Garcia-Mas, J</creatorcontrib><creatorcontrib>Cardus, M</creatorcontrib><creatorcontrib>Pueyo, N</creatorcontrib><creatorcontrib>Lopez-Sese, A.I</creatorcontrib><creatorcontrib>Arroyo, M</creatorcontrib><creatorcontrib>Gomez-Paniagua, H</creatorcontrib><creatorcontrib>Arus, P</creatorcontrib><creatorcontrib>Vicente, M.C. de</creatorcontrib><collection>AGRIS</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Entomology Abstracts (Full archive)</collection><collection>Neurosciences Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Agricultural Science Collection</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Science Database (Alumni Edition)</collection><collection>STEM Database</collection><collection>ProQuest Pharma Collection</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>Canadian Business & Current Affairs Database</collection><collection>Canadian Business & Current Affairs Database (Alumni Edition)</collection><collection>Research Library (Alumni Edition)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest One Sustainability</collection><collection>ProQuest Central UK/Ireland</collection><collection>Agricultural & Environmental Science Collection</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>Research Library Prep</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Agricultural Science Database</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Research Library</collection><collection>Science Database</collection><collection>CBCA Reference & Current Events</collection><collection>Biological Science Database</collection><collection>Research Library (Corporate)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central Basic</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Genome</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Oliver, M</au><au>Garcia-Mas, J</au><au>Cardus, M</au><au>Pueyo, N</au><au>Lopez-Sese, A.I</au><au>Arroyo, M</au><au>Gomez-Paniagua, H</au><au>Arus, P</au><au>Vicente, M.C. de</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Construction of a reference linkage map for melon</atitle><jtitle>Genome</jtitle><addtitle>Génome</addtitle><date>2001-10</date><risdate>2001</risdate><volume>44</volume><issue>5</issue><spage>836</spage><epage>845</epage><pages>836-845</pages><issn>0831-2796</issn><eissn>1480-3321</eissn><coden>GENOE3</coden><abstract>A map of melon (Cucumis melo L.) with 411 markers (234 RFLPs, 94 AFLPs, 47 RAPDs, 29 SSRs, five inter-SSRs, and two isozymes) and one morphological trait (carpel number) was constructed using the F2 progeny of a cross between the Korean accession PI161375 and the Spanish melon type 'Pinyonet Piel de Sapo'. RFLPs were obtained using 212 probes from different genomic and cDNA melon libraries, including 16 Arabidopsis ESTs, 13 Cucumis known genes, and three resistant gene homologues. Most loci (391) mapped to 12 major linkage groups, spanning a total genetic distance of 1197 cM, with an average map interval of 3 cM/marker. The remaining 21 loci (six RAPDs and 15 AFLPs) were not linked. A majority (66%) of the markers were codominant (RFLPs, SSRs, and isozymes), making them easily transferable to other melon crosses. Such markers can be used as a reference, to merge other melon and cucumber maps already constructed. Indeed, some of them (23 SSRs, 14 RFLPs, one isozyme, and one morphological trait) could act as anchor points with other published cucurbit maps.</abstract><cop>Ottawa, Canada</cop><pub>NRC Research Press</pub><pmid>11681608</pmid><doi>10.1139/g01-073</doi><tpages>10</tpages></addata></record> |
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| subjects | alleles amplified fragment length polymorphism Arabidopsis Chromosome Mapping Cucumis melo Cucumis melo - enzymology Cucumis melo - genetics DNA Probes Flowers & plants Fruits genetic distance genetic markers Genetics Isoenzymes - genetics linkage (genetics) loci Melons microsatellite repeats Polymorphism, Genetic Polymorphism, Restriction Fragment Length Probes R&D Random Amplified Polymorphic DNA Technique Repetitive Sequences, Nucleic Acid Research & development restriction fragment length polymorphism |
| title | Construction of a reference linkage map for melon |
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