Polymorphisms and haplotypes of the NBS1 gene are associated with risk of sporadic breast cancer in non-Hispanic white women ≤55 years
DNA double-strand breaks (DSBs) may lead to genomic instability and cancer if unrepaired. Nijmegen breakage syndrome 1 (NBS1) protein is one of the key proteins that participates in recognition and repair of DSBs in humans. We hypothesized that polymorphisms of NBS1 are associated with breast cancer...
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creator | Lu, Jiachun Wei, Qingyi Bondy, Melissa L. Li, Donghui Brewster, Abenaa Shete, Sanjay Yu, Tse-Kuan Sahin, Aysegul Meric-Bernstam, Funda Hunt, Kelly K. Singletary, S.Eva Ross, Merrick I. Wang, Li-E |
description | DNA double-strand breaks (DSBs) may lead to genomic instability and cancer if unrepaired. Nijmegen breakage syndrome 1 (NBS1) protein is one of the key proteins that participates in recognition and repair of DSBs in humans. We hypothesized that polymorphisms of NBS1 are associated with breast cancer risk. We selected three NBS1 haplotype-tagging polymorphisms (i.e. 924T>C, 8360G>C and 30537G>C) to represent all common (≥5%) haplotypes reported in the National Institute of Environmental Health Sciences database and to reconstruct haplotypes. In a hospital-based case–control study of 421 non-Hispanic white patients with sporadic breast cancer (≤55 years) and 423 cancer-free controls who were frequency-matched with the cases by age (±5 years and ≤55), we tested our hypothesis and found that compared with 924TT homozygotes the variant homozygote 924CC carriers had a 4.55-fold increased risk of breast cancer [95% confidence interval (CI) = 1.51–13.7] and that compared with the 8360GG genotype the variant genotypes were also associated with a significantly increased risk [adjusted odds ratio (OR) = 1.33, 95% CI = 1.00–1.78 for 8360CG; adjusted OR = 1.83, 95% CI = 1.14–2.94 for 8360CC]. However, these effects were not observed for the 30537G>C polymorphism. Furthermore, the derived haplotypes were associated with risk in a dose–response manner as the number of variant (risk) alleles (i.e. 8360C, 924C or 30537C) increased (adjusted OR = 1.07, 95% CI = 0.78–1.46 for 1–2 variant alleles; adjusted OR = 2.47, 95% CI = 1.48–4.14 for 3–6 variant alleles; Ptrend = 0.006). These findings suggest that NBS1 polymorphisms and haplotypes may contribute to the etiology of sporadic breast cancer in young non-Hispanic white women. Large studies are warranted to confirm these findings. |
doi_str_mv | 10.1093/carcin/bgl077 |
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Nijmegen breakage syndrome 1 (NBS1) protein is one of the key proteins that participates in recognition and repair of DSBs in humans. We hypothesized that polymorphisms of NBS1 are associated with breast cancer risk. We selected three NBS1 haplotype-tagging polymorphisms (i.e. 924T>C, 8360G>C and 30537G>C) to represent all common (≥5%) haplotypes reported in the National Institute of Environmental Health Sciences database and to reconstruct haplotypes. In a hospital-based case–control study of 421 non-Hispanic white patients with sporadic breast cancer (≤55 years) and 423 cancer-free controls who were frequency-matched with the cases by age (±5 years and ≤55), we tested our hypothesis and found that compared with 924TT homozygotes the variant homozygote 924CC carriers had a 4.55-fold increased risk of breast cancer [95% confidence interval (CI) = 1.51–13.7] and that compared with the 8360GG genotype the variant genotypes were also associated with a significantly increased risk [adjusted odds ratio (OR) = 1.33, 95% CI = 1.00–1.78 for 8360CG; adjusted OR = 1.83, 95% CI = 1.14–2.94 for 8360CC]. However, these effects were not observed for the 30537G>C polymorphism. Furthermore, the derived haplotypes were associated with risk in a dose–response manner as the number of variant (risk) alleles (i.e. 8360C, 924C or 30537C) increased (adjusted OR = 1.07, 95% CI = 0.78–1.46 for 1–2 variant alleles; adjusted OR = 2.47, 95% CI = 1.48–4.14 for 3–6 variant alleles; Ptrend = 0.006). These findings suggest that NBS1 polymorphisms and haplotypes may contribute to the etiology of sporadic breast cancer in young non-Hispanic white women. Large studies are warranted to confirm these findings.</description><identifier>ISSN: 0143-3334</identifier><identifier>EISSN: 1460-2180</identifier><identifier>DOI: 10.1093/carcin/bgl077</identifier><identifier>PMID: 16714331</identifier><identifier>CODEN: CRNGDP</identifier><language>eng</language><publisher>Oxford: Oxford University Press</publisher><subject>Aged ; Biological and medical sciences ; Breast Neoplasms - genetics ; Carcinogenesis, carcinogens and anticarcinogens ; Cell Cycle Proteins - genetics ; European Continental Ancestry Group ; Female ; Genetic Predisposition to Disease ; Genotype ; Gynecology. Andrology. Obstetrics ; Haplotypes ; Homozygote ; Humans ; Mammary gland diseases ; Medical sciences ; Middle Aged ; Models, Genetic ; Nuclear Proteins - genetics ; Odds Ratio ; Polymorphism, Genetic ; Risk ; Tumors</subject><ispartof>Carcinogenesis (New York), 2006-11, Vol.27 (11), p.2209-2216</ispartof><rights>2007 INIST-CNRS</rights><rights>Copyright Oxford University Press(England) Nov 15, 2006</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c425t-f8c240bf57ea9613acb3cb9133acecfcddbd1bd3f15f558d6095b5f003bd8e013</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=18284355$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/16714331$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Lu, Jiachun</creatorcontrib><creatorcontrib>Wei, Qingyi</creatorcontrib><creatorcontrib>Bondy, Melissa L.</creatorcontrib><creatorcontrib>Li, Donghui</creatorcontrib><creatorcontrib>Brewster, Abenaa</creatorcontrib><creatorcontrib>Shete, Sanjay</creatorcontrib><creatorcontrib>Yu, Tse-Kuan</creatorcontrib><creatorcontrib>Sahin, Aysegul</creatorcontrib><creatorcontrib>Meric-Bernstam, Funda</creatorcontrib><creatorcontrib>Hunt, Kelly K.</creatorcontrib><creatorcontrib>Singletary, S.Eva</creatorcontrib><creatorcontrib>Ross, Merrick I.</creatorcontrib><creatorcontrib>Wang, Li-E</creatorcontrib><title>Polymorphisms and haplotypes of the NBS1 gene are associated with risk of sporadic breast cancer in non-Hispanic white women ≤55 years</title><title>Carcinogenesis (New York)</title><addtitle>Carcinogenesis</addtitle><description>DNA double-strand breaks (DSBs) may lead to genomic instability and cancer if unrepaired. Nijmegen breakage syndrome 1 (NBS1) protein is one of the key proteins that participates in recognition and repair of DSBs in humans. We hypothesized that polymorphisms of NBS1 are associated with breast cancer risk. We selected three NBS1 haplotype-tagging polymorphisms (i.e. 924T>C, 8360G>C and 30537G>C) to represent all common (≥5%) haplotypes reported in the National Institute of Environmental Health Sciences database and to reconstruct haplotypes. In a hospital-based case–control study of 421 non-Hispanic white patients with sporadic breast cancer (≤55 years) and 423 cancer-free controls who were frequency-matched with the cases by age (±5 years and ≤55), we tested our hypothesis and found that compared with 924TT homozygotes the variant homozygote 924CC carriers had a 4.55-fold increased risk of breast cancer [95% confidence interval (CI) = 1.51–13.7] and that compared with the 8360GG genotype the variant genotypes were also associated with a significantly increased risk [adjusted odds ratio (OR) = 1.33, 95% CI = 1.00–1.78 for 8360CG; adjusted OR = 1.83, 95% CI = 1.14–2.94 for 8360CC]. However, these effects were not observed for the 30537G>C polymorphism. Furthermore, the derived haplotypes were associated with risk in a dose–response manner as the number of variant (risk) alleles (i.e. 8360C, 924C or 30537C) increased (adjusted OR = 1.07, 95% CI = 0.78–1.46 for 1–2 variant alleles; adjusted OR = 2.47, 95% CI = 1.48–4.14 for 3–6 variant alleles; Ptrend = 0.006). These findings suggest that NBS1 polymorphisms and haplotypes may contribute to the etiology of sporadic breast cancer in young non-Hispanic white women. Large studies are warranted to confirm these findings.</description><subject>Aged</subject><subject>Biological and medical sciences</subject><subject>Breast Neoplasms - genetics</subject><subject>Carcinogenesis, carcinogens and anticarcinogens</subject><subject>Cell Cycle Proteins - genetics</subject><subject>European Continental Ancestry Group</subject><subject>Female</subject><subject>Genetic Predisposition to Disease</subject><subject>Genotype</subject><subject>Gynecology. Andrology. Obstetrics</subject><subject>Haplotypes</subject><subject>Homozygote</subject><subject>Humans</subject><subject>Mammary gland diseases</subject><subject>Medical sciences</subject><subject>Middle Aged</subject><subject>Models, Genetic</subject><subject>Nuclear Proteins - genetics</subject><subject>Odds Ratio</subject><subject>Polymorphism, Genetic</subject><subject>Risk</subject><subject>Tumors</subject><issn>0143-3334</issn><issn>1460-2180</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2006</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNpNkMuKFDEUhoMoTju6dCtBcFlOUqnUZamDdg82KqgovQm5TmWmKqnJSdPTb6Dv4ZP5JNbQjePicA78H_-BD6HnlLympGNnWibtw5m6HEjTPEALWtWkKGlLHqIFoRUrGGPVCXoCcEUIrRnvHqMTWjdzxOgC_fwch_0Y09R7GAHLYHAvpyHm_WQBR4dzb_HHt18ovrTBYpnmAYjay2wN3vnc4-Th-o6EKSZpvMYqWQkZaxm0TdgHHGIoVh4mGeZ01_ts8S6ONuA_v35zjvdWJniKHjk5gH123Kfo2_t3X89XxfrT8uL8zbrQVclz4VpdVkQ53ljZ1ZRJrZhWHWXzZbXTxihDlWGOcsd5a2rSccUdIUyZ1hLKTtHLQ--U4s3WQhZXcZvC_FKUtGOkqWs-Q8UB0ikCJOvElPwo015QIu60i4N2cdA-8y-OpVs1WnNPHz3PwKsjIEHLwaXZjYd7ri3bivH_HnvI9vZfLtO1qBvWcLH6sREfNuVmuWy-izX7C9cRnzQ</recordid><startdate>20061101</startdate><enddate>20061101</enddate><creator>Lu, Jiachun</creator><creator>Wei, Qingyi</creator><creator>Bondy, Melissa L.</creator><creator>Li, Donghui</creator><creator>Brewster, Abenaa</creator><creator>Shete, Sanjay</creator><creator>Yu, Tse-Kuan</creator><creator>Sahin, Aysegul</creator><creator>Meric-Bernstam, Funda</creator><creator>Hunt, Kelly K.</creator><creator>Singletary, S.Eva</creator><creator>Ross, Merrick I.</creator><creator>Wang, Li-E</creator><general>Oxford University Press</general><general>Oxford Publishing Limited (England)</general><scope>BSCLL</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7T5</scope><scope>7TM</scope><scope>7TO</scope><scope>7U7</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>H94</scope><scope>K9.</scope><scope>P64</scope><scope>RC3</scope></search><sort><creationdate>20061101</creationdate><title>Polymorphisms and haplotypes of the NBS1 gene are associated with risk of sporadic breast cancer in non-Hispanic white women ≤55 years</title><author>Lu, Jiachun ; Wei, Qingyi ; Bondy, Melissa L. ; Li, Donghui ; Brewster, Abenaa ; Shete, Sanjay ; Yu, Tse-Kuan ; Sahin, Aysegul ; Meric-Bernstam, Funda ; Hunt, Kelly K. ; Singletary, S.Eva ; Ross, Merrick I. ; Wang, Li-E</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c425t-f8c240bf57ea9613acb3cb9133acecfcddbd1bd3f15f558d6095b5f003bd8e013</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2006</creationdate><topic>Aged</topic><topic>Biological and medical sciences</topic><topic>Breast Neoplasms - genetics</topic><topic>Carcinogenesis, carcinogens and anticarcinogens</topic><topic>Cell Cycle Proteins - genetics</topic><topic>European Continental Ancestry Group</topic><topic>Female</topic><topic>Genetic Predisposition to Disease</topic><topic>Genotype</topic><topic>Gynecology. Andrology. Obstetrics</topic><topic>Haplotypes</topic><topic>Homozygote</topic><topic>Humans</topic><topic>Mammary gland diseases</topic><topic>Medical sciences</topic><topic>Middle Aged</topic><topic>Models, Genetic</topic><topic>Nuclear Proteins - genetics</topic><topic>Odds Ratio</topic><topic>Polymorphism, Genetic</topic><topic>Risk</topic><topic>Tumors</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Lu, Jiachun</creatorcontrib><creatorcontrib>Wei, Qingyi</creatorcontrib><creatorcontrib>Bondy, Melissa L.</creatorcontrib><creatorcontrib>Li, Donghui</creatorcontrib><creatorcontrib>Brewster, Abenaa</creatorcontrib><creatorcontrib>Shete, Sanjay</creatorcontrib><creatorcontrib>Yu, Tse-Kuan</creatorcontrib><creatorcontrib>Sahin, Aysegul</creatorcontrib><creatorcontrib>Meric-Bernstam, Funda</creatorcontrib><creatorcontrib>Hunt, Kelly K.</creatorcontrib><creatorcontrib>Singletary, S.Eva</creatorcontrib><creatorcontrib>Ross, Merrick I.</creatorcontrib><creatorcontrib>Wang, Li-E</creatorcontrib><collection>Istex</collection><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Immunology Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Oncogenes and Growth Factors Abstracts</collection><collection>Toxicology Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><jtitle>Carcinogenesis (New York)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Lu, Jiachun</au><au>Wei, Qingyi</au><au>Bondy, Melissa L.</au><au>Li, Donghui</au><au>Brewster, Abenaa</au><au>Shete, Sanjay</au><au>Yu, Tse-Kuan</au><au>Sahin, Aysegul</au><au>Meric-Bernstam, Funda</au><au>Hunt, Kelly K.</au><au>Singletary, S.Eva</au><au>Ross, Merrick I.</au><au>Wang, Li-E</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Polymorphisms and haplotypes of the NBS1 gene are associated with risk of sporadic breast cancer in non-Hispanic white women ≤55 years</atitle><jtitle>Carcinogenesis (New York)</jtitle><addtitle>Carcinogenesis</addtitle><date>2006-11-01</date><risdate>2006</risdate><volume>27</volume><issue>11</issue><spage>2209</spage><epage>2216</epage><pages>2209-2216</pages><issn>0143-3334</issn><eissn>1460-2180</eissn><coden>CRNGDP</coden><abstract>DNA double-strand breaks (DSBs) may lead to genomic instability and cancer if unrepaired. Nijmegen breakage syndrome 1 (NBS1) protein is one of the key proteins that participates in recognition and repair of DSBs in humans. We hypothesized that polymorphisms of NBS1 are associated with breast cancer risk. We selected three NBS1 haplotype-tagging polymorphisms (i.e. 924T>C, 8360G>C and 30537G>C) to represent all common (≥5%) haplotypes reported in the National Institute of Environmental Health Sciences database and to reconstruct haplotypes. In a hospital-based case–control study of 421 non-Hispanic white patients with sporadic breast cancer (≤55 years) and 423 cancer-free controls who were frequency-matched with the cases by age (±5 years and ≤55), we tested our hypothesis and found that compared with 924TT homozygotes the variant homozygote 924CC carriers had a 4.55-fold increased risk of breast cancer [95% confidence interval (CI) = 1.51–13.7] and that compared with the 8360GG genotype the variant genotypes were also associated with a significantly increased risk [adjusted odds ratio (OR) = 1.33, 95% CI = 1.00–1.78 for 8360CG; adjusted OR = 1.83, 95% CI = 1.14–2.94 for 8360CC]. However, these effects were not observed for the 30537G>C polymorphism. Furthermore, the derived haplotypes were associated with risk in a dose–response manner as the number of variant (risk) alleles (i.e. 8360C, 924C or 30537C) increased (adjusted OR = 1.07, 95% CI = 0.78–1.46 for 1–2 variant alleles; adjusted OR = 2.47, 95% CI = 1.48–4.14 for 3–6 variant alleles; Ptrend = 0.006). These findings suggest that NBS1 polymorphisms and haplotypes may contribute to the etiology of sporadic breast cancer in young non-Hispanic white women. Large studies are warranted to confirm these findings.</abstract><cop>Oxford</cop><pub>Oxford University Press</pub><pmid>16714331</pmid><doi>10.1093/carcin/bgl077</doi><tpages>8</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Aged Biological and medical sciences Breast Neoplasms - genetics Carcinogenesis, carcinogens and anticarcinogens Cell Cycle Proteins - genetics European Continental Ancestry Group Female Genetic Predisposition to Disease Genotype Gynecology. Andrology. Obstetrics Haplotypes Homozygote Humans Mammary gland diseases Medical sciences Middle Aged Models, Genetic Nuclear Proteins - genetics Odds Ratio Polymorphism, Genetic Risk Tumors |
title | Polymorphisms and haplotypes of the NBS1 gene are associated with risk of sporadic breast cancer in non-Hispanic white women ≤55 years |
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