Expressional and Functional Verification of the Involvement of CmEXPA4 in Chrysanthemum Root Development
Expansin (EXP) plays an important role in plant root formation. The EXP genes associated with chrysanthemum roots have not yet been reported. Here we isolated a root-specific EXP gene in chrysanthemum ( Chrysanthemum morifolium ), namely CmEXPA4 . Bioinformatics analysis showed that CmEXPA4 -encoded...
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description | Expansin (EXP) plays an important role in plant root formation. The EXP genes associated with chrysanthemum roots have not yet been reported. Here we isolated a root-specific EXP gene in chrysanthemum (
Chrysanthemum morifolium
), namely
CmEXPA4
. Bioinformatics analysis showed that
CmEXPA4
-encoded protein has a conserved DPPB (Double-Psi Beta-Barrel) domain in the N-terminal with a series of Cys residues, an HFD (His-Phe-Asp) motif in the central region, and a pollen allergen domain in the C-terminal. The protein also has a specific α-insertion of WCNP (Trp-Cys-Asn-Pro), which suggests that it belongs to the A-subgroup of the
EXP
family. In the present study, we cloned the 1,129 bp promoter region upstream of
CmEXPA4
, and the analysis revealed an abundance of cis-acting elements associated with hormones, light and stress-related responses, and some root-specific regulatory elements in particular. Subcellular localization results indicated that CmEXPA4 locates in the cell wall. Exogenous indole butyric acid induced the up-regulation of
CmEXPA4
expression, whereas exogenous abscisic acid inhibited its expression. Tissue expression analysis showed that
CmEXPA4
was preferentially expressed in the roots and was synchronized with the rapid emergence of the root. These results suggested that
CmEXPA4
may act on the growth and development of chrysanthemum roots. The function of
CmEXPA4
was further tested by virus-induced gene silencing, and the results showed that
CmEXPA4
silencing inhibited the normal development of the chrysanthemum root system. The roots appeared thinner and shorter, and several important root parameters, including total length, average diameter, surface area, total volume, and root tip number, decreased significantly. The cortical cells of the transgenic plant roots were significantly smaller and shorter than those of the control. Collectively, our results demonstrated that
CmEXPA4
gene plays a key role in the growth and development of chrysanthemum roots and affects the root system by acting on the individual cells. |
doi_str_mv | 10.1007/s00344-019-09940-x |
format | Article |
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Chrysanthemum morifolium
), namely
CmEXPA4
. Bioinformatics analysis showed that
CmEXPA4
-encoded protein has a conserved DPPB (Double-Psi Beta-Barrel) domain in the N-terminal with a series of Cys residues, an HFD (His-Phe-Asp) motif in the central region, and a pollen allergen domain in the C-terminal. The protein also has a specific α-insertion of WCNP (Trp-Cys-Asn-Pro), which suggests that it belongs to the A-subgroup of the
EXP
family. In the present study, we cloned the 1,129 bp promoter region upstream of
CmEXPA4
, and the analysis revealed an abundance of cis-acting elements associated with hormones, light and stress-related responses, and some root-specific regulatory elements in particular. Subcellular localization results indicated that CmEXPA4 locates in the cell wall. Exogenous indole butyric acid induced the up-regulation of
CmEXPA4
expression, whereas exogenous abscisic acid inhibited its expression. Tissue expression analysis showed that
CmEXPA4
was preferentially expressed in the roots and was synchronized with the rapid emergence of the root. These results suggested that
CmEXPA4
may act on the growth and development of chrysanthemum roots. The function of
CmEXPA4
was further tested by virus-induced gene silencing, and the results showed that
CmEXPA4
silencing inhibited the normal development of the chrysanthemum root system. The roots appeared thinner and shorter, and several important root parameters, including total length, average diameter, surface area, total volume, and root tip number, decreased significantly. The cortical cells of the transgenic plant roots were significantly smaller and shorter than those of the control. Collectively, our results demonstrated that
CmEXPA4
gene plays a key role in the growth and development of chrysanthemum roots and affects the root system by acting on the individual cells.</description><identifier>ISSN: 0721-7595</identifier><identifier>EISSN: 1435-8107</identifier><identifier>DOI: 10.1007/s00344-019-09940-x</identifier><language>eng</language><publisher>New York: Springer US</publisher><subject>Abscisic acid ; Agriculture ; Allergens ; Bioinformatics ; Biomedical and Life Sciences ; Butyric acid ; Cell division ; Cell walls ; Chrysanthemum morifolium ; Cloning ; Flowers & plants ; Gene silencing ; Genes ; Hormones ; Indole-3-butyric acid ; Indoles ; Insertion ; Life Sciences ; Light effects ; Localization ; Physiology ; Plant Anatomy/Development ; Plant cells ; Plant growth ; Plant Physiology ; Plant roots ; Plant Sciences ; Pollen ; Proteins ; Regulatory sequences ; Root development ; Roots ; Subgroups ; Tissue analysis ; Transgenic plants ; Viruses ; Websites</subject><ispartof>Journal of plant growth regulation, 2019-12, Vol.38 (4), p.1375-1386</ispartof><rights>Springer Science+Business Media, LLC, part of Springer Nature 2019</rights><rights>Journal of Plant Growth Regulation is a copyright of Springer, (2019). All Rights Reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c319t-8b55eb64f3b378428dd06b4954c722b5d7b52e78f79d4c6a65a38934cb01f3163</citedby><cites>FETCH-LOGICAL-c319t-8b55eb64f3b378428dd06b4954c722b5d7b52e78f79d4c6a65a38934cb01f3163</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s00344-019-09940-x$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s00344-019-09940-x$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,776,780,27901,27902,41464,42533,51294</link.rule.ids></links><search><creatorcontrib>Ren, Hong</creatorcontrib><creatorcontrib>Wen, Li-zhu</creatorcontrib><creatorcontrib>Guo, Yun-hui</creatorcontrib><creatorcontrib>Yu, Yuan-yuan</creatorcontrib><creatorcontrib>Sun, Cui-hui</creatorcontrib><creatorcontrib>Fan, Hong-mei</creatorcontrib><creatorcontrib>Ma, Fang-fang</creatorcontrib><creatorcontrib>Zheng, Cheng-shu</creatorcontrib><title>Expressional and Functional Verification of the Involvement of CmEXPA4 in Chrysanthemum Root Development</title><title>Journal of plant growth regulation</title><addtitle>J Plant Growth Regul</addtitle><description>Expansin (EXP) plays an important role in plant root formation. The EXP genes associated with chrysanthemum roots have not yet been reported. Here we isolated a root-specific EXP gene in chrysanthemum (
Chrysanthemum morifolium
), namely
CmEXPA4
. Bioinformatics analysis showed that
CmEXPA4
-encoded protein has a conserved DPPB (Double-Psi Beta-Barrel) domain in the N-terminal with a series of Cys residues, an HFD (His-Phe-Asp) motif in the central region, and a pollen allergen domain in the C-terminal. The protein also has a specific α-insertion of WCNP (Trp-Cys-Asn-Pro), which suggests that it belongs to the A-subgroup of the
EXP
family. In the present study, we cloned the 1,129 bp promoter region upstream of
CmEXPA4
, and the analysis revealed an abundance of cis-acting elements associated with hormones, light and stress-related responses, and some root-specific regulatory elements in particular. Subcellular localization results indicated that CmEXPA4 locates in the cell wall. Exogenous indole butyric acid induced the up-regulation of
CmEXPA4
expression, whereas exogenous abscisic acid inhibited its expression. Tissue expression analysis showed that
CmEXPA4
was preferentially expressed in the roots and was synchronized with the rapid emergence of the root. These results suggested that
CmEXPA4
may act on the growth and development of chrysanthemum roots. The function of
CmEXPA4
was further tested by virus-induced gene silencing, and the results showed that
CmEXPA4
silencing inhibited the normal development of the chrysanthemum root system. The roots appeared thinner and shorter, and several important root parameters, including total length, average diameter, surface area, total volume, and root tip number, decreased significantly. The cortical cells of the transgenic plant roots were significantly smaller and shorter than those of the control. Collectively, our results demonstrated that
CmEXPA4
gene plays a key role in the growth and development of chrysanthemum roots and affects the root system by acting on the individual cells.</description><subject>Abscisic acid</subject><subject>Agriculture</subject><subject>Allergens</subject><subject>Bioinformatics</subject><subject>Biomedical and Life Sciences</subject><subject>Butyric acid</subject><subject>Cell division</subject><subject>Cell walls</subject><subject>Chrysanthemum morifolium</subject><subject>Cloning</subject><subject>Flowers & plants</subject><subject>Gene silencing</subject><subject>Genes</subject><subject>Hormones</subject><subject>Indole-3-butyric acid</subject><subject>Indoles</subject><subject>Insertion</subject><subject>Life Sciences</subject><subject>Light effects</subject><subject>Localization</subject><subject>Physiology</subject><subject>Plant Anatomy/Development</subject><subject>Plant cells</subject><subject>Plant growth</subject><subject>Plant Physiology</subject><subject>Plant roots</subject><subject>Plant Sciences</subject><subject>Pollen</subject><subject>Proteins</subject><subject>Regulatory sequences</subject><subject>Root development</subject><subject>Roots</subject><subject>Subgroups</subject><subject>Tissue analysis</subject><subject>Transgenic plants</subject><subject>Viruses</subject><subject>Websites</subject><issn>0721-7595</issn><issn>1435-8107</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2019</creationdate><recordtype>article</recordtype><sourceid>BENPR</sourceid><recordid>eNp9kNFKwzAUhoMoOKcv4FXA62jSJE1zOeqmg4EiKt6FtE1dR5vUpB3b29tawTuvDv_h-w-cD4Brgm8JxuIuYEwZQ5hIhKVkGB1OwIwwylFCsDgFMywiggSX_BxchLDDmAxBzMB2eWi9CaFyVtdQ2wKuept3U3w3viqrXI8RuhJ2WwPXdu_qvWmM7cZV2iw_nhcMVhamW38M2g5Q0zfwxbkO3pu9qV07wpfgrNR1MFe_cw7eVsvX9BFtnh7W6WKDckpkh5KMc5PFrKQZFQmLkqLAccYkZ7mIoowXIuOREUkpZMHyWMdc00RSlmeYlJTEdA5uprutd1-9CZ3aud4P3wQVkUQOLOcjFU1U7l0I3pSq9VWj_VERrEajajKqBqPqx6g6DCU6lcIA20_j_07_0_oGNaR6Fg</recordid><startdate>20191201</startdate><enddate>20191201</enddate><creator>Ren, Hong</creator><creator>Wen, Li-zhu</creator><creator>Guo, Yun-hui</creator><creator>Yu, Yuan-yuan</creator><creator>Sun, Cui-hui</creator><creator>Fan, Hong-mei</creator><creator>Ma, Fang-fang</creator><creator>Zheng, Cheng-shu</creator><general>Springer US</general><general>Springer Nature B.V</general><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7X2</scope><scope>7X7</scope><scope>7XB</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0K</scope><scope>M0S</scope><scope>M7P</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope></search><sort><creationdate>20191201</creationdate><title>Expressional and Functional Verification of the Involvement of CmEXPA4 in Chrysanthemum Root Development</title><author>Ren, Hong ; Wen, Li-zhu ; Guo, Yun-hui ; Yu, Yuan-yuan ; Sun, Cui-hui ; Fan, Hong-mei ; Ma, Fang-fang ; Zheng, Cheng-shu</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c319t-8b55eb64f3b378428dd06b4954c722b5d7b52e78f79d4c6a65a38934cb01f3163</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2019</creationdate><topic>Abscisic acid</topic><topic>Agriculture</topic><topic>Allergens</topic><topic>Bioinformatics</topic><topic>Biomedical and Life Sciences</topic><topic>Butyric acid</topic><topic>Cell division</topic><topic>Cell walls</topic><topic>Chrysanthemum morifolium</topic><topic>Cloning</topic><topic>Flowers & plants</topic><topic>Gene silencing</topic><topic>Genes</topic><topic>Hormones</topic><topic>Indole-3-butyric acid</topic><topic>Indoles</topic><topic>Insertion</topic><topic>Life Sciences</topic><topic>Light effects</topic><topic>Localization</topic><topic>Physiology</topic><topic>Plant Anatomy/Development</topic><topic>Plant cells</topic><topic>Plant growth</topic><topic>Plant Physiology</topic><topic>Plant roots</topic><topic>Plant Sciences</topic><topic>Pollen</topic><topic>Proteins</topic><topic>Regulatory sequences</topic><topic>Root development</topic><topic>Roots</topic><topic>Subgroups</topic><topic>Tissue analysis</topic><topic>Transgenic plants</topic><topic>Viruses</topic><topic>Websites</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Ren, Hong</creatorcontrib><creatorcontrib>Wen, Li-zhu</creatorcontrib><creatorcontrib>Guo, Yun-hui</creatorcontrib><creatorcontrib>Yu, Yuan-yuan</creatorcontrib><creatorcontrib>Sun, Cui-hui</creatorcontrib><creatorcontrib>Fan, Hong-mei</creatorcontrib><creatorcontrib>Ma, Fang-fang</creatorcontrib><creatorcontrib>Zheng, Cheng-shu</creatorcontrib><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Agricultural Science Collection</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest One Sustainability</collection><collection>ProQuest Central UK/Ireland</collection><collection>Agricultural & Environmental Science Collection</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Agricultural Science Database</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Biological Science Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><jtitle>Journal of plant growth regulation</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Ren, Hong</au><au>Wen, Li-zhu</au><au>Guo, Yun-hui</au><au>Yu, Yuan-yuan</au><au>Sun, Cui-hui</au><au>Fan, Hong-mei</au><au>Ma, Fang-fang</au><au>Zheng, Cheng-shu</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Expressional and Functional Verification of the Involvement of CmEXPA4 in Chrysanthemum Root Development</atitle><jtitle>Journal of plant growth regulation</jtitle><stitle>J Plant Growth Regul</stitle><date>2019-12-01</date><risdate>2019</risdate><volume>38</volume><issue>4</issue><spage>1375</spage><epage>1386</epage><pages>1375-1386</pages><issn>0721-7595</issn><eissn>1435-8107</eissn><abstract>Expansin (EXP) plays an important role in plant root formation. The EXP genes associated with chrysanthemum roots have not yet been reported. Here we isolated a root-specific EXP gene in chrysanthemum (
Chrysanthemum morifolium
), namely
CmEXPA4
. Bioinformatics analysis showed that
CmEXPA4
-encoded protein has a conserved DPPB (Double-Psi Beta-Barrel) domain in the N-terminal with a series of Cys residues, an HFD (His-Phe-Asp) motif in the central region, and a pollen allergen domain in the C-terminal. The protein also has a specific α-insertion of WCNP (Trp-Cys-Asn-Pro), which suggests that it belongs to the A-subgroup of the
EXP
family. In the present study, we cloned the 1,129 bp promoter region upstream of
CmEXPA4
, and the analysis revealed an abundance of cis-acting elements associated with hormones, light and stress-related responses, and some root-specific regulatory elements in particular. Subcellular localization results indicated that CmEXPA4 locates in the cell wall. Exogenous indole butyric acid induced the up-regulation of
CmEXPA4
expression, whereas exogenous abscisic acid inhibited its expression. Tissue expression analysis showed that
CmEXPA4
was preferentially expressed in the roots and was synchronized with the rapid emergence of the root. These results suggested that
CmEXPA4
may act on the growth and development of chrysanthemum roots. The function of
CmEXPA4
was further tested by virus-induced gene silencing, and the results showed that
CmEXPA4
silencing inhibited the normal development of the chrysanthemum root system. The roots appeared thinner and shorter, and several important root parameters, including total length, average diameter, surface area, total volume, and root tip number, decreased significantly. The cortical cells of the transgenic plant roots were significantly smaller and shorter than those of the control. Collectively, our results demonstrated that
CmEXPA4
gene plays a key role in the growth and development of chrysanthemum roots and affects the root system by acting on the individual cells.</abstract><cop>New York</cop><pub>Springer US</pub><doi>10.1007/s00344-019-09940-x</doi><tpages>12</tpages></addata></record> |
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subjects | Abscisic acid Agriculture Allergens Bioinformatics Biomedical and Life Sciences Butyric acid Cell division Cell walls Chrysanthemum morifolium Cloning Flowers & plants Gene silencing Genes Hormones Indole-3-butyric acid Indoles Insertion Life Sciences Light effects Localization Physiology Plant Anatomy/Development Plant cells Plant growth Plant Physiology Plant roots Plant Sciences Pollen Proteins Regulatory sequences Root development Roots Subgroups Tissue analysis Transgenic plants Viruses Websites |
title | Expressional and Functional Verification of the Involvement of CmEXPA4 in Chrysanthemum Root Development |
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