Physiological and comparative proteomic analyses of saline-alkali NaHCO₃-responses in leaves of halophyte Puccinellia tenuiflora

Aims Soil alkalization imposes severe ion toxicity, osmotic stress, and high pH stress to plants, inhibiting their growth and productivity. NaHCO 3 is a main component of alkaline soil. However, knowledge of the NaHCO 3 -responsive proteomic pattern of alkaligrass is still lacking. Alkaligrass ( Puc...

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Veröffentlicht in:Plant and soil 2019-04, Vol.437 (1/2), p.137-158
Hauptverfasser: Yin, Zepeng, Zhang, Heng, Zhao, Qi, Yoo, Mi-Jeong, Zhu, Ning, Yu, Jianlan, Yu, Juanjuan, Guo, Siyi, Miao, Yuchen, Chen, Sixue, Qin, Zhi, Dai, Shaojun
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container_issue 1/2
container_start_page 137
container_title Plant and soil
container_volume 437
creator Yin, Zepeng
Zhang, Heng
Zhao, Qi
Yoo, Mi-Jeong
Zhu, Ning
Yu, Jianlan
Yu, Juanjuan
Guo, Siyi
Miao, Yuchen
Chen, Sixue
Qin, Zhi
Dai, Shaojun
description Aims Soil alkalization imposes severe ion toxicity, osmotic stress, and high pH stress to plants, inhibiting their growth and productivity. NaHCO 3 is a main component of alkaline soil. However, knowledge of the NaHCO 3 -responsive proteomic pattern of alkaligrass is still lacking. Alkaligrass ( Puccinellia tenuiflora ) is a monocotyledonous halophyte pasture widely distributed in the Songnen Plain in Northeastern China. This study aims to investigate the NaHCO 3 -responsive molecular mechanisms in the alkaligrass plants. Methods An integrative approach including photosynthetic and redox physiology, and comparative proteomics was used. Results NaHCO 3 decreased photosynthesis, but increased nonphotochemical quenching, increased membrane electrolyte leakage of alkaligrass, and increased proline and glycine betaine concentrations in leaves. In addition, the NaHCO 3 stress increased Na + concentration and decreased K + /Na + ratio in leaves, while Ca 2+ and Mg 2+ concentrations were maintained, contributing to signaling and homeostasis of ion and enzyme activity. Furthermore, O 2 − generation rate and H 2 O 2 concentration were increased, and the activities of ten antioxidant enzymes and antioxidant concentrations were changed in response to the NaHCO 3 stress. Proteomics revealed 90 NaHCO 3 -responsive proteins, 54% of which were localized in chloroplasts. They were mainly involved in signaling, photosynthesis, stress and defense, carbohydrate and energy metabolism, as well as protein synthesis, processing and turnover. Some protein abundances did not correlate well with their activities, implying that the enzyme activities were affected by NaHCO 3 -induced post-translational modifications. Conclusions To cope with the NaHCO 3 stress, alkaligrass deployed multiple strategies, including triggering phospholipase D (PLD)-mediated Ca 2+ signaling pathways, enhancing diverse reactive oxygen species (ROS) scavenging pathways, and regulating chloroplast protein synthesis and processing.
doi_str_mv 10.1007/s11104-019-03955-9
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NaHCO 3 is a main component of alkaline soil. However, knowledge of the NaHCO 3 -responsive proteomic pattern of alkaligrass is still lacking. Alkaligrass ( Puccinellia tenuiflora ) is a monocotyledonous halophyte pasture widely distributed in the Songnen Plain in Northeastern China. This study aims to investigate the NaHCO 3 -responsive molecular mechanisms in the alkaligrass plants. Methods An integrative approach including photosynthetic and redox physiology, and comparative proteomics was used. Results NaHCO 3 decreased photosynthesis, but increased nonphotochemical quenching, increased membrane electrolyte leakage of alkaligrass, and increased proline and glycine betaine concentrations in leaves. In addition, the NaHCO 3 stress increased Na + concentration and decreased K + /Na + ratio in leaves, while Ca 2+ and Mg 2+ concentrations were maintained, contributing to signaling and homeostasis of ion and enzyme activity. Furthermore, O 2 − generation rate and H 2 O 2 concentration were increased, and the activities of ten antioxidant enzymes and antioxidant concentrations were changed in response to the NaHCO 3 stress. Proteomics revealed 90 NaHCO 3 -responsive proteins, 54% of which were localized in chloroplasts. They were mainly involved in signaling, photosynthesis, stress and defense, carbohydrate and energy metabolism, as well as protein synthesis, processing and turnover. Some protein abundances did not correlate well with their activities, implying that the enzyme activities were affected by NaHCO 3 -induced post-translational modifications. Conclusions To cope with the NaHCO 3 stress, alkaligrass deployed multiple strategies, including triggering phospholipase D (PLD)-mediated Ca 2+ signaling pathways, enhancing diverse reactive oxygen species (ROS) scavenging pathways, and regulating chloroplast protein synthesis and processing.</description><identifier>ISSN: 0032-079X</identifier><identifier>EISSN: 1573-5036</identifier><identifier>DOI: 10.1007/s11104-019-03955-9</identifier><language>eng</language><publisher>Cham: Springer Science + Business Media</publisher><subject>Alkaline soils ; Alkalizing ; Antioxidants ; Biomedical and Life Sciences ; Calcium ions ; Calcium signalling ; Carbohydrate metabolism ; Carbohydrates ; Chloroplasts ; Ecology ; Electrolyte leakage ; Energy metabolism ; Enzymatic activity ; Enzyme activity ; Enzymes ; Glycine ; Glycine betaine ; Halophytes ; Homeostasis ; Hydrogen peroxide ; Leaves ; Life Sciences ; Magnesium ; Metabolism ; Molecular modelling ; Osmotic stress ; Pasture ; Phospholipase ; Phospholipase D ; Photosynthesis ; Physiology ; Plant Physiology ; Plant Sciences ; Post-translation ; Proline ; Protein biosynthesis ; Protein synthesis ; Protein turnover ; Proteins ; Proteomics ; Puccinellia ; Reactive oxygen species ; REGULAR ARTICLE ; Scavenging ; Signal transduction ; Sodium bicarbonate ; Soil Science &amp; Conservation ; Stress concentration ; Toxicity</subject><ispartof>Plant and soil, 2019-04, Vol.437 (1/2), p.137-158</ispartof><rights>Springer Nature Switzerland AG 2019</rights><rights>Plant and Soil is a copyright of Springer, (2019). All Rights Reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c341t-e3bc74a369a80a3673bf90f81841ad9489dedda7ceffc5e1a101e93a3b8048ae3</citedby><cites>FETCH-LOGICAL-c341t-e3bc74a369a80a3673bf90f81841ad9489dedda7ceffc5e1a101e93a3b8048ae3</cites><orcidid>0000-0001-8063-6946</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.jstor.org/stable/pdf/48703740$$EPDF$$P50$$Gjstor$$H</linktopdf><linktohtml>$$Uhttps://www.jstor.org/stable/48703740$$EHTML$$P50$$Gjstor$$H</linktohtml><link.rule.ids>314,780,784,803,27923,27924,41487,42556,51318,58016,58249</link.rule.ids></links><search><creatorcontrib>Yin, Zepeng</creatorcontrib><creatorcontrib>Zhang, Heng</creatorcontrib><creatorcontrib>Zhao, Qi</creatorcontrib><creatorcontrib>Yoo, Mi-Jeong</creatorcontrib><creatorcontrib>Zhu, Ning</creatorcontrib><creatorcontrib>Yu, Jianlan</creatorcontrib><creatorcontrib>Yu, Juanjuan</creatorcontrib><creatorcontrib>Guo, Siyi</creatorcontrib><creatorcontrib>Miao, Yuchen</creatorcontrib><creatorcontrib>Chen, Sixue</creatorcontrib><creatorcontrib>Qin, Zhi</creatorcontrib><creatorcontrib>Dai, Shaojun</creatorcontrib><title>Physiological and comparative proteomic analyses of saline-alkali NaHCO₃-responses in leaves of halophyte Puccinellia tenuiflora</title><title>Plant and soil</title><addtitle>Plant Soil</addtitle><description>Aims Soil alkalization imposes severe ion toxicity, osmotic stress, and high pH stress to plants, inhibiting their growth and productivity. NaHCO 3 is a main component of alkaline soil. However, knowledge of the NaHCO 3 -responsive proteomic pattern of alkaligrass is still lacking. Alkaligrass ( Puccinellia tenuiflora ) is a monocotyledonous halophyte pasture widely distributed in the Songnen Plain in Northeastern China. This study aims to investigate the NaHCO 3 -responsive molecular mechanisms in the alkaligrass plants. Methods An integrative approach including photosynthetic and redox physiology, and comparative proteomics was used. Results NaHCO 3 decreased photosynthesis, but increased nonphotochemical quenching, increased membrane electrolyte leakage of alkaligrass, and increased proline and glycine betaine concentrations in leaves. In addition, the NaHCO 3 stress increased Na + concentration and decreased K + /Na + ratio in leaves, while Ca 2+ and Mg 2+ concentrations were maintained, contributing to signaling and homeostasis of ion and enzyme activity. Furthermore, O 2 − generation rate and H 2 O 2 concentration were increased, and the activities of ten antioxidant enzymes and antioxidant concentrations were changed in response to the NaHCO 3 stress. Proteomics revealed 90 NaHCO 3 -responsive proteins, 54% of which were localized in chloroplasts. They were mainly involved in signaling, photosynthesis, stress and defense, carbohydrate and energy metabolism, as well as protein synthesis, processing and turnover. Some protein abundances did not correlate well with their activities, implying that the enzyme activities were affected by NaHCO 3 -induced post-translational modifications. Conclusions To cope with the NaHCO 3 stress, alkaligrass deployed multiple strategies, including triggering phospholipase D (PLD)-mediated Ca 2+ signaling pathways, enhancing diverse reactive oxygen species (ROS) scavenging pathways, and regulating chloroplast protein synthesis and processing.</description><subject>Alkaline soils</subject><subject>Alkalizing</subject><subject>Antioxidants</subject><subject>Biomedical and Life Sciences</subject><subject>Calcium ions</subject><subject>Calcium signalling</subject><subject>Carbohydrate metabolism</subject><subject>Carbohydrates</subject><subject>Chloroplasts</subject><subject>Ecology</subject><subject>Electrolyte leakage</subject><subject>Energy metabolism</subject><subject>Enzymatic activity</subject><subject>Enzyme activity</subject><subject>Enzymes</subject><subject>Glycine</subject><subject>Glycine betaine</subject><subject>Halophytes</subject><subject>Homeostasis</subject><subject>Hydrogen peroxide</subject><subject>Leaves</subject><subject>Life Sciences</subject><subject>Magnesium</subject><subject>Metabolism</subject><subject>Molecular modelling</subject><subject>Osmotic stress</subject><subject>Pasture</subject><subject>Phospholipase</subject><subject>Phospholipase D</subject><subject>Photosynthesis</subject><subject>Physiology</subject><subject>Plant Physiology</subject><subject>Plant Sciences</subject><subject>Post-translation</subject><subject>Proline</subject><subject>Protein biosynthesis</subject><subject>Protein synthesis</subject><subject>Protein turnover</subject><subject>Proteins</subject><subject>Proteomics</subject><subject>Puccinellia</subject><subject>Reactive oxygen species</subject><subject>REGULAR ARTICLE</subject><subject>Scavenging</subject><subject>Signal transduction</subject><subject>Sodium bicarbonate</subject><subject>Soil Science &amp; 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Zhang, Heng ; Zhao, Qi ; Yoo, Mi-Jeong ; Zhu, Ning ; Yu, Jianlan ; Yu, Juanjuan ; Guo, Siyi ; Miao, Yuchen ; Chen, Sixue ; Qin, Zhi ; Dai, Shaojun</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c341t-e3bc74a369a80a3673bf90f81841ad9489dedda7ceffc5e1a101e93a3b8048ae3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2019</creationdate><topic>Alkaline soils</topic><topic>Alkalizing</topic><topic>Antioxidants</topic><topic>Biomedical and Life Sciences</topic><topic>Calcium ions</topic><topic>Calcium signalling</topic><topic>Carbohydrate metabolism</topic><topic>Carbohydrates</topic><topic>Chloroplasts</topic><topic>Ecology</topic><topic>Electrolyte leakage</topic><topic>Energy metabolism</topic><topic>Enzymatic activity</topic><topic>Enzyme activity</topic><topic>Enzymes</topic><topic>Glycine</topic><topic>Glycine betaine</topic><topic>Halophytes</topic><topic>Homeostasis</topic><topic>Hydrogen peroxide</topic><topic>Leaves</topic><topic>Life Sciences</topic><topic>Magnesium</topic><topic>Metabolism</topic><topic>Molecular modelling</topic><topic>Osmotic stress</topic><topic>Pasture</topic><topic>Phospholipase</topic><topic>Phospholipase D</topic><topic>Photosynthesis</topic><topic>Physiology</topic><topic>Plant Physiology</topic><topic>Plant Sciences</topic><topic>Post-translation</topic><topic>Proline</topic><topic>Protein biosynthesis</topic><topic>Protein synthesis</topic><topic>Protein turnover</topic><topic>Proteins</topic><topic>Proteomics</topic><topic>Puccinellia</topic><topic>Reactive oxygen species</topic><topic>REGULAR ARTICLE</topic><topic>Scavenging</topic><topic>Signal transduction</topic><topic>Sodium bicarbonate</topic><topic>Soil Science &amp; 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NaHCO 3 is a main component of alkaline soil. However, knowledge of the NaHCO 3 -responsive proteomic pattern of alkaligrass is still lacking. Alkaligrass ( Puccinellia tenuiflora ) is a monocotyledonous halophyte pasture widely distributed in the Songnen Plain in Northeastern China. This study aims to investigate the NaHCO 3 -responsive molecular mechanisms in the alkaligrass plants. Methods An integrative approach including photosynthetic and redox physiology, and comparative proteomics was used. Results NaHCO 3 decreased photosynthesis, but increased nonphotochemical quenching, increased membrane electrolyte leakage of alkaligrass, and increased proline and glycine betaine concentrations in leaves. In addition, the NaHCO 3 stress increased Na + concentration and decreased K + /Na + ratio in leaves, while Ca 2+ and Mg 2+ concentrations were maintained, contributing to signaling and homeostasis of ion and enzyme activity. Furthermore, O 2 − generation rate and H 2 O 2 concentration were increased, and the activities of ten antioxidant enzymes and antioxidant concentrations were changed in response to the NaHCO 3 stress. Proteomics revealed 90 NaHCO 3 -responsive proteins, 54% of which were localized in chloroplasts. They were mainly involved in signaling, photosynthesis, stress and defense, carbohydrate and energy metabolism, as well as protein synthesis, processing and turnover. Some protein abundances did not correlate well with their activities, implying that the enzyme activities were affected by NaHCO 3 -induced post-translational modifications. Conclusions To cope with the NaHCO 3 stress, alkaligrass deployed multiple strategies, including triggering phospholipase D (PLD)-mediated Ca 2+ signaling pathways, enhancing diverse reactive oxygen species (ROS) scavenging pathways, and regulating chloroplast protein synthesis and processing.</abstract><cop>Cham</cop><pub>Springer Science + Business Media</pub><doi>10.1007/s11104-019-03955-9</doi><tpages>22</tpages><orcidid>https://orcid.org/0000-0001-8063-6946</orcidid></addata></record>
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subjects Alkaline soils
Alkalizing
Antioxidants
Biomedical and Life Sciences
Calcium ions
Calcium signalling
Carbohydrate metabolism
Carbohydrates
Chloroplasts
Ecology
Electrolyte leakage
Energy metabolism
Enzymatic activity
Enzyme activity
Enzymes
Glycine
Glycine betaine
Halophytes
Homeostasis
Hydrogen peroxide
Leaves
Life Sciences
Magnesium
Metabolism
Molecular modelling
Osmotic stress
Pasture
Phospholipase
Phospholipase D
Photosynthesis
Physiology
Plant Physiology
Plant Sciences
Post-translation
Proline
Protein biosynthesis
Protein synthesis
Protein turnover
Proteins
Proteomics
Puccinellia
Reactive oxygen species
REGULAR ARTICLE
Scavenging
Signal transduction
Sodium bicarbonate
Soil Science & Conservation
Stress concentration
Toxicity
title Physiological and comparative proteomic analyses of saline-alkali NaHCO₃-responses in leaves of halophyte Puccinellia tenuiflora
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