Direct estimation of 17O MR images (DIESIS) for quantification of oxygen metabolism in the human brain with partial volume correction

Purpose To provide a data post‐processing method that corrects for partial volume effects (PVE) and fast T2* decay in dynamic 17O MRI for the mapping of cerebral metabolic rates of oxygen consumption (CMRO2). Methods CMRO2 is altered in neurodegenerative diseases and tumors and can be measured after...

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Veröffentlicht in:Magnetic resonance in medicine 2018-12, Vol.80 (6), p.2717-2725
Hauptverfasser: Kurzhunov, Dmitry, Borowiak, Robert, Reisert, Marco, Özen, Ali Caglar, Bock, Michael
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container_end_page 2725
container_issue 6
container_start_page 2717
container_title Magnetic resonance in medicine
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creator Kurzhunov, Dmitry
Borowiak, Robert
Reisert, Marco
Özen, Ali Caglar
Bock, Michael
description Purpose To provide a data post‐processing method that corrects for partial volume effects (PVE) and fast T2* decay in dynamic 17O MRI for the mapping of cerebral metabolic rates of oxygen consumption (CMRO2). Methods CMRO2 is altered in neurodegenerative diseases and tumors and can be measured after 17O gas inhalation using dynamic 17O MRI. CMRO2 quantification is difficult because of PVE. To correct for PVE, a direct estimation of the MR images (DIESIS) method is proposed and used in 4 dynamic 17O MRI data sets of a healthy volunteer acquired on a 3T MRI system. With DIESIS, 17O MR signal time curves in selected regions were directly estimated based on parcellation of a coregistered 1H MPRAGE image. Results Profile likelihood analysis of the DIESIS method showed identifiability of CMRO2. In white matter (WM), DIESES reduced CMRO2 from 0.97 ± 0.25 µmol/gtissue/min with Kaiser‐Bessel gridding reconstruction to 0.85 ± 0.21 µmol/gtissue/min, whereas in gray matter (GM) it increases from 1.3 ± 0.31 µmol/gtissue/min to 1.86 ± 0.36 µmol/gtissue/min; both values are closer to the literature values from the 15O‐PET studies. Conclusion DIESIS provided an increased separation of CMRO2 values in GM and WM brain regions and corrected for partial volume effects in 17O‐MRI inhalation experiments. DIESIS could also be applied to more heterogeneous tissues such as glioblastomas if subregions of the tumor can be represented as additional parcels.
doi_str_mv 10.1002/mrm.27224
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Methods CMRO2 is altered in neurodegenerative diseases and tumors and can be measured after 17O gas inhalation using dynamic 17O MRI. CMRO2 quantification is difficult because of PVE. To correct for PVE, a direct estimation of the MR images (DIESIS) method is proposed and used in 4 dynamic 17O MRI data sets of a healthy volunteer acquired on a 3T MRI system. With DIESIS, 17O MR signal time curves in selected regions were directly estimated based on parcellation of a coregistered 1H MPRAGE image. Results Profile likelihood analysis of the DIESIS method showed identifiability of CMRO2. In white matter (WM), DIESES reduced CMRO2 from 0.97 ± 0.25 µmol/gtissue/min with Kaiser‐Bessel gridding reconstruction to 0.85 ± 0.21 µmol/gtissue/min, whereas in gray matter (GM) it increases from 1.3 ± 0.31 µmol/gtissue/min to 1.86 ± 0.36 µmol/gtissue/min; both values are closer to the literature values from the 15O‐PET studies. Conclusion DIESIS provided an increased separation of CMRO2 values in GM and WM brain regions and corrected for partial volume effects in 17O‐MRI inhalation experiments. DIESIS could also be applied to more heterogeneous tissues such as glioblastomas if subregions of the tumor can be represented as additional parcels.</description><identifier>ISSN: 0740-3194</identifier><identifier>EISSN: 1522-2594</identifier><identifier>DOI: 10.1002/mrm.27224</identifier><language>eng</language><publisher>Hoboken: Wiley Subscription Services, Inc</publisher><subject>17O MRI ; Brain ; Brain tumors ; cerebral metabolic rate of oxygen consumption (CMRO2) ; Data processing ; Decay rate ; Image processing ; Inhalation ; Magnetic resonance imaging ; Medical imaging ; Metabolism ; Neurodegenerative diseases ; Neurological diseases ; non‐proton MRI ; Oxygen consumption ; Oxygen metabolism ; partial volume correction ; Positron emission tomography ; Respiration ; Substantia alba ; Substantia grisea ; Tumors</subject><ispartof>Magnetic resonance in medicine, 2018-12, Vol.80 (6), p.2717-2725</ispartof><rights>2018 International Society for Magnetic Resonance in Medicine</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1002%2Fmrm.27224$$EPDF$$P50$$Gwiley$$H</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1002%2Fmrm.27224$$EHTML$$P50$$Gwiley$$H</linktohtml><link.rule.ids>314,776,780,1411,1427,27903,27904,45553,45554,46388,46812</link.rule.ids></links><search><creatorcontrib>Kurzhunov, Dmitry</creatorcontrib><creatorcontrib>Borowiak, Robert</creatorcontrib><creatorcontrib>Reisert, Marco</creatorcontrib><creatorcontrib>Özen, Ali Caglar</creatorcontrib><creatorcontrib>Bock, Michael</creatorcontrib><title>Direct estimation of 17O MR images (DIESIS) for quantification of oxygen metabolism in the human brain with partial volume correction</title><title>Magnetic resonance in medicine</title><description>Purpose To provide a data post‐processing method that corrects for partial volume effects (PVE) and fast T2* decay in dynamic 17O MRI for the mapping of cerebral metabolic rates of oxygen consumption (CMRO2). Methods CMRO2 is altered in neurodegenerative diseases and tumors and can be measured after 17O gas inhalation using dynamic 17O MRI. CMRO2 quantification is difficult because of PVE. To correct for PVE, a direct estimation of the MR images (DIESIS) method is proposed and used in 4 dynamic 17O MRI data sets of a healthy volunteer acquired on a 3T MRI system. With DIESIS, 17O MR signal time curves in selected regions were directly estimated based on parcellation of a coregistered 1H MPRAGE image. Results Profile likelihood analysis of the DIESIS method showed identifiability of CMRO2. In white matter (WM), DIESES reduced CMRO2 from 0.97 ± 0.25 µmol/gtissue/min with Kaiser‐Bessel gridding reconstruction to 0.85 ± 0.21 µmol/gtissue/min, whereas in gray matter (GM) it increases from 1.3 ± 0.31 µmol/gtissue/min to 1.86 ± 0.36 µmol/gtissue/min; both values are closer to the literature values from the 15O‐PET studies. Conclusion DIESIS provided an increased separation of CMRO2 values in GM and WM brain regions and corrected for partial volume effects in 17O‐MRI inhalation experiments. DIESIS could also be applied to more heterogeneous tissues such as glioblastomas if subregions of the tumor can be represented as additional parcels.</description><subject>17O MRI</subject><subject>Brain</subject><subject>Brain tumors</subject><subject>cerebral metabolic rate of oxygen consumption (CMRO2)</subject><subject>Data processing</subject><subject>Decay rate</subject><subject>Image processing</subject><subject>Inhalation</subject><subject>Magnetic resonance imaging</subject><subject>Medical imaging</subject><subject>Metabolism</subject><subject>Neurodegenerative diseases</subject><subject>Neurological diseases</subject><subject>non‐proton MRI</subject><subject>Oxygen consumption</subject><subject>Oxygen metabolism</subject><subject>partial volume correction</subject><subject>Positron emission tomography</subject><subject>Respiration</subject><subject>Substantia alba</subject><subject>Substantia grisea</subject><subject>Tumors</subject><issn>0740-3194</issn><issn>1522-2594</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2018</creationdate><recordtype>article</recordtype><recordid>eNo9kMtOAjEYhRujiYgufIMmbnQx2Nt06NIAKgmEBNg3ndKBkpkpdDoiD-B7W8C4-W85OSf_B8AjRj2MEHmtfNUjGSHsCnRwSkhCUsGuQQdlDCUUC3YL7ppmixASImMd8DO03ugATRNspYJ1NXQFxNkMTucwXtamgc_D8WgxXrzAwnm4b1UdbGH1v9h9H9emhpUJKnelbSpoaxg2Bm7aStUw9yruBxs2cKd8sKqEX65sKwO186fsaHMPbgpVNubhr3fB8n20HHwmk9nHePA2SXa8zxJSKJ1yrDXjmGe6nwpOlebFSmQpySnSQmkmeL5aEaU1JTkXjGJOSV8RxRGmXfB0sd15t2_jy3LrWl_HREkw4RllPJYueL2oDrY0R7nzEYM_SozkibCMhOWZsJzOp-eB_gLuIHDK</recordid><startdate>201812</startdate><enddate>201812</enddate><creator>Kurzhunov, Dmitry</creator><creator>Borowiak, Robert</creator><creator>Reisert, Marco</creator><creator>Özen, Ali Caglar</creator><creator>Bock, Michael</creator><general>Wiley Subscription Services, Inc</general><scope>8FD</scope><scope>FR3</scope><scope>K9.</scope><scope>M7Z</scope><scope>P64</scope></search><sort><creationdate>201812</creationdate><title>Direct estimation of 17O MR images (DIESIS) for quantification of oxygen metabolism in the human brain with partial volume correction</title><author>Kurzhunov, Dmitry ; Borowiak, Robert ; Reisert, Marco ; Özen, Ali Caglar ; Bock, Michael</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-p684-2fac561cc46167c85963ac6fd9752b30c9ac496bdd2acc32b694316328a2a6013</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2018</creationdate><topic>17O MRI</topic><topic>Brain</topic><topic>Brain tumors</topic><topic>cerebral metabolic rate of oxygen consumption (CMRO2)</topic><topic>Data processing</topic><topic>Decay rate</topic><topic>Image processing</topic><topic>Inhalation</topic><topic>Magnetic resonance imaging</topic><topic>Medical imaging</topic><topic>Metabolism</topic><topic>Neurodegenerative diseases</topic><topic>Neurological diseases</topic><topic>non‐proton MRI</topic><topic>Oxygen consumption</topic><topic>Oxygen metabolism</topic><topic>partial volume correction</topic><topic>Positron emission tomography</topic><topic>Respiration</topic><topic>Substantia alba</topic><topic>Substantia grisea</topic><topic>Tumors</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Kurzhunov, Dmitry</creatorcontrib><creatorcontrib>Borowiak, Robert</creatorcontrib><creatorcontrib>Reisert, Marco</creatorcontrib><creatorcontrib>Özen, Ali Caglar</creatorcontrib><creatorcontrib>Bock, Michael</creatorcontrib><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>ProQuest Health &amp; Medical Complete (Alumni)</collection><collection>Biochemistry Abstracts 1</collection><collection>Biotechnology and BioEngineering Abstracts</collection><jtitle>Magnetic resonance in medicine</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Kurzhunov, Dmitry</au><au>Borowiak, Robert</au><au>Reisert, Marco</au><au>Özen, Ali Caglar</au><au>Bock, Michael</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Direct estimation of 17O MR images (DIESIS) for quantification of oxygen metabolism in the human brain with partial volume correction</atitle><jtitle>Magnetic resonance in medicine</jtitle><date>2018-12</date><risdate>2018</risdate><volume>80</volume><issue>6</issue><spage>2717</spage><epage>2725</epage><pages>2717-2725</pages><issn>0740-3194</issn><eissn>1522-2594</eissn><abstract>Purpose To provide a data post‐processing method that corrects for partial volume effects (PVE) and fast T2* decay in dynamic 17O MRI for the mapping of cerebral metabolic rates of oxygen consumption (CMRO2). Methods CMRO2 is altered in neurodegenerative diseases and tumors and can be measured after 17O gas inhalation using dynamic 17O MRI. CMRO2 quantification is difficult because of PVE. To correct for PVE, a direct estimation of the MR images (DIESIS) method is proposed and used in 4 dynamic 17O MRI data sets of a healthy volunteer acquired on a 3T MRI system. With DIESIS, 17O MR signal time curves in selected regions were directly estimated based on parcellation of a coregistered 1H MPRAGE image. Results Profile likelihood analysis of the DIESIS method showed identifiability of CMRO2. In white matter (WM), DIESES reduced CMRO2 from 0.97 ± 0.25 µmol/gtissue/min with Kaiser‐Bessel gridding reconstruction to 0.85 ± 0.21 µmol/gtissue/min, whereas in gray matter (GM) it increases from 1.3 ± 0.31 µmol/gtissue/min to 1.86 ± 0.36 µmol/gtissue/min; both values are closer to the literature values from the 15O‐PET studies. Conclusion DIESIS provided an increased separation of CMRO2 values in GM and WM brain regions and corrected for partial volume effects in 17O‐MRI inhalation experiments. DIESIS could also be applied to more heterogeneous tissues such as glioblastomas if subregions of the tumor can be represented as additional parcels.</abstract><cop>Hoboken</cop><pub>Wiley Subscription Services, Inc</pub><doi>10.1002/mrm.27224</doi><tpages>9</tpages></addata></record>
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subjects 17O MRI
Brain
Brain tumors
cerebral metabolic rate of oxygen consumption (CMRO2)
Data processing
Decay rate
Image processing
Inhalation
Magnetic resonance imaging
Medical imaging
Metabolism
Neurodegenerative diseases
Neurological diseases
non‐proton MRI
Oxygen consumption
Oxygen metabolism
partial volume correction
Positron emission tomography
Respiration
Substantia alba
Substantia grisea
Tumors
title Direct estimation of 17O MR images (DIESIS) for quantification of oxygen metabolism in the human brain with partial volume correction
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