Direct estimation of 17O MR images (DIESIS) for quantification of oxygen metabolism in the human brain with partial volume correction
Purpose To provide a data post‐processing method that corrects for partial volume effects (PVE) and fast T2* decay in dynamic 17O MRI for the mapping of cerebral metabolic rates of oxygen consumption (CMRO2). Methods CMRO2 is altered in neurodegenerative diseases and tumors and can be measured after...
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Veröffentlicht in: | Magnetic resonance in medicine 2018-12, Vol.80 (6), p.2717-2725 |
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creator | Kurzhunov, Dmitry Borowiak, Robert Reisert, Marco Özen, Ali Caglar Bock, Michael |
description | Purpose
To provide a data post‐processing method that corrects for partial volume effects (PVE) and fast
T2* decay in dynamic 17O MRI for the mapping of cerebral metabolic rates of oxygen consumption (CMRO2).
Methods
CMRO2 is altered in neurodegenerative diseases and tumors and can be measured after 17O gas inhalation using dynamic 17O MRI. CMRO2 quantification is difficult because of PVE. To correct for PVE, a direct estimation of the MR images (DIESIS) method is proposed and used in 4 dynamic 17O MRI data sets of a healthy volunteer acquired on a 3T MRI system. With DIESIS, 17O MR signal time curves in selected regions were directly estimated based on parcellation of a coregistered 1H MPRAGE image.
Results
Profile likelihood analysis of the DIESIS method showed identifiability of CMRO2. In white matter (WM), DIESES reduced CMRO2 from 0.97 ± 0.25 µmol/gtissue/min with Kaiser‐Bessel gridding reconstruction to 0.85 ± 0.21 µmol/gtissue/min, whereas in gray matter (GM) it increases from 1.3 ± 0.31 µmol/gtissue/min to 1.86 ± 0.36 µmol/gtissue/min; both values are closer to the literature values from the 15O‐PET studies.
Conclusion
DIESIS provided an increased separation of CMRO2 values in GM and WM brain regions and corrected for partial volume effects in 17O‐MRI inhalation experiments. DIESIS could also be applied to more heterogeneous tissues such as glioblastomas if subregions of the tumor can be represented as additional parcels. |
doi_str_mv | 10.1002/mrm.27224 |
format | Article |
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To provide a data post‐processing method that corrects for partial volume effects (PVE) and fast
T2* decay in dynamic 17O MRI for the mapping of cerebral metabolic rates of oxygen consumption (CMRO2).
Methods
CMRO2 is altered in neurodegenerative diseases and tumors and can be measured after 17O gas inhalation using dynamic 17O MRI. CMRO2 quantification is difficult because of PVE. To correct for PVE, a direct estimation of the MR images (DIESIS) method is proposed and used in 4 dynamic 17O MRI data sets of a healthy volunteer acquired on a 3T MRI system. With DIESIS, 17O MR signal time curves in selected regions were directly estimated based on parcellation of a coregistered 1H MPRAGE image.
Results
Profile likelihood analysis of the DIESIS method showed identifiability of CMRO2. In white matter (WM), DIESES reduced CMRO2 from 0.97 ± 0.25 µmol/gtissue/min with Kaiser‐Bessel gridding reconstruction to 0.85 ± 0.21 µmol/gtissue/min, whereas in gray matter (GM) it increases from 1.3 ± 0.31 µmol/gtissue/min to 1.86 ± 0.36 µmol/gtissue/min; both values are closer to the literature values from the 15O‐PET studies.
Conclusion
DIESIS provided an increased separation of CMRO2 values in GM and WM brain regions and corrected for partial volume effects in 17O‐MRI inhalation experiments. DIESIS could also be applied to more heterogeneous tissues such as glioblastomas if subregions of the tumor can be represented as additional parcels.</description><identifier>ISSN: 0740-3194</identifier><identifier>EISSN: 1522-2594</identifier><identifier>DOI: 10.1002/mrm.27224</identifier><language>eng</language><publisher>Hoboken: Wiley Subscription Services, Inc</publisher><subject>17O MRI ; Brain ; Brain tumors ; cerebral metabolic rate of oxygen consumption (CMRO2) ; Data processing ; Decay rate ; Image processing ; Inhalation ; Magnetic resonance imaging ; Medical imaging ; Metabolism ; Neurodegenerative diseases ; Neurological diseases ; non‐proton MRI ; Oxygen consumption ; Oxygen metabolism ; partial volume correction ; Positron emission tomography ; Respiration ; Substantia alba ; Substantia grisea ; Tumors</subject><ispartof>Magnetic resonance in medicine, 2018-12, Vol.80 (6), p.2717-2725</ispartof><rights>2018 International Society for Magnetic Resonance in Medicine</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1002%2Fmrm.27224$$EPDF$$P50$$Gwiley$$H</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1002%2Fmrm.27224$$EHTML$$P50$$Gwiley$$H</linktohtml><link.rule.ids>314,776,780,1411,1427,27903,27904,45553,45554,46388,46812</link.rule.ids></links><search><creatorcontrib>Kurzhunov, Dmitry</creatorcontrib><creatorcontrib>Borowiak, Robert</creatorcontrib><creatorcontrib>Reisert, Marco</creatorcontrib><creatorcontrib>Özen, Ali Caglar</creatorcontrib><creatorcontrib>Bock, Michael</creatorcontrib><title>Direct estimation of 17O MR images (DIESIS) for quantification of oxygen metabolism in the human brain with partial volume correction</title><title>Magnetic resonance in medicine</title><description>Purpose
To provide a data post‐processing method that corrects for partial volume effects (PVE) and fast
T2* decay in dynamic 17O MRI for the mapping of cerebral metabolic rates of oxygen consumption (CMRO2).
Methods
CMRO2 is altered in neurodegenerative diseases and tumors and can be measured after 17O gas inhalation using dynamic 17O MRI. CMRO2 quantification is difficult because of PVE. To correct for PVE, a direct estimation of the MR images (DIESIS) method is proposed and used in 4 dynamic 17O MRI data sets of a healthy volunteer acquired on a 3T MRI system. With DIESIS, 17O MR signal time curves in selected regions were directly estimated based on parcellation of a coregistered 1H MPRAGE image.
Results
Profile likelihood analysis of the DIESIS method showed identifiability of CMRO2. In white matter (WM), DIESES reduced CMRO2 from 0.97 ± 0.25 µmol/gtissue/min with Kaiser‐Bessel gridding reconstruction to 0.85 ± 0.21 µmol/gtissue/min, whereas in gray matter (GM) it increases from 1.3 ± 0.31 µmol/gtissue/min to 1.86 ± 0.36 µmol/gtissue/min; both values are closer to the literature values from the 15O‐PET studies.
Conclusion
DIESIS provided an increased separation of CMRO2 values in GM and WM brain regions and corrected for partial volume effects in 17O‐MRI inhalation experiments. DIESIS could also be applied to more heterogeneous tissues such as glioblastomas if subregions of the tumor can be represented as additional parcels.</description><subject>17O MRI</subject><subject>Brain</subject><subject>Brain tumors</subject><subject>cerebral metabolic rate of oxygen consumption (CMRO2)</subject><subject>Data processing</subject><subject>Decay rate</subject><subject>Image processing</subject><subject>Inhalation</subject><subject>Magnetic resonance imaging</subject><subject>Medical imaging</subject><subject>Metabolism</subject><subject>Neurodegenerative diseases</subject><subject>Neurological diseases</subject><subject>non‐proton MRI</subject><subject>Oxygen consumption</subject><subject>Oxygen metabolism</subject><subject>partial volume correction</subject><subject>Positron emission tomography</subject><subject>Respiration</subject><subject>Substantia alba</subject><subject>Substantia grisea</subject><subject>Tumors</subject><issn>0740-3194</issn><issn>1522-2594</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2018</creationdate><recordtype>article</recordtype><recordid>eNo9kMtOAjEYhRujiYgufIMmbnQx2Nt06NIAKgmEBNg3ndKBkpkpdDoiD-B7W8C4-W85OSf_B8AjRj2MEHmtfNUjGSHsCnRwSkhCUsGuQQdlDCUUC3YL7ppmixASImMd8DO03ugATRNspYJ1NXQFxNkMTucwXtamgc_D8WgxXrzAwnm4b1UdbGH1v9h9H9emhpUJKnelbSpoaxg2Bm7aStUw9yruBxs2cKd8sKqEX65sKwO186fsaHMPbgpVNubhr3fB8n20HHwmk9nHePA2SXa8zxJSKJ1yrDXjmGe6nwpOlebFSmQpySnSQmkmeL5aEaU1JTkXjGJOSV8RxRGmXfB0sd15t2_jy3LrWl_HREkw4RllPJYueL2oDrY0R7nzEYM_SozkibCMhOWZsJzOp-eB_gLuIHDK</recordid><startdate>201812</startdate><enddate>201812</enddate><creator>Kurzhunov, Dmitry</creator><creator>Borowiak, Robert</creator><creator>Reisert, Marco</creator><creator>Özen, Ali Caglar</creator><creator>Bock, Michael</creator><general>Wiley Subscription Services, Inc</general><scope>8FD</scope><scope>FR3</scope><scope>K9.</scope><scope>M7Z</scope><scope>P64</scope></search><sort><creationdate>201812</creationdate><title>Direct estimation of 17O MR images (DIESIS) for quantification of oxygen metabolism in the human brain with partial volume correction</title><author>Kurzhunov, Dmitry ; Borowiak, Robert ; Reisert, Marco ; Özen, Ali Caglar ; Bock, Michael</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-p684-2fac561cc46167c85963ac6fd9752b30c9ac496bdd2acc32b694316328a2a6013</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2018</creationdate><topic>17O MRI</topic><topic>Brain</topic><topic>Brain tumors</topic><topic>cerebral metabolic rate of oxygen consumption (CMRO2)</topic><topic>Data processing</topic><topic>Decay rate</topic><topic>Image processing</topic><topic>Inhalation</topic><topic>Magnetic resonance imaging</topic><topic>Medical imaging</topic><topic>Metabolism</topic><topic>Neurodegenerative diseases</topic><topic>Neurological diseases</topic><topic>non‐proton MRI</topic><topic>Oxygen consumption</topic><topic>Oxygen metabolism</topic><topic>partial volume correction</topic><topic>Positron emission tomography</topic><topic>Respiration</topic><topic>Substantia alba</topic><topic>Substantia grisea</topic><topic>Tumors</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Kurzhunov, Dmitry</creatorcontrib><creatorcontrib>Borowiak, Robert</creatorcontrib><creatorcontrib>Reisert, Marco</creatorcontrib><creatorcontrib>Özen, Ali Caglar</creatorcontrib><creatorcontrib>Bock, Michael</creatorcontrib><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Biochemistry Abstracts 1</collection><collection>Biotechnology and BioEngineering Abstracts</collection><jtitle>Magnetic resonance in medicine</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Kurzhunov, Dmitry</au><au>Borowiak, Robert</au><au>Reisert, Marco</au><au>Özen, Ali Caglar</au><au>Bock, Michael</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Direct estimation of 17O MR images (DIESIS) for quantification of oxygen metabolism in the human brain with partial volume correction</atitle><jtitle>Magnetic resonance in medicine</jtitle><date>2018-12</date><risdate>2018</risdate><volume>80</volume><issue>6</issue><spage>2717</spage><epage>2725</epage><pages>2717-2725</pages><issn>0740-3194</issn><eissn>1522-2594</eissn><abstract>Purpose
To provide a data post‐processing method that corrects for partial volume effects (PVE) and fast
T2* decay in dynamic 17O MRI for the mapping of cerebral metabolic rates of oxygen consumption (CMRO2).
Methods
CMRO2 is altered in neurodegenerative diseases and tumors and can be measured after 17O gas inhalation using dynamic 17O MRI. CMRO2 quantification is difficult because of PVE. To correct for PVE, a direct estimation of the MR images (DIESIS) method is proposed and used in 4 dynamic 17O MRI data sets of a healthy volunteer acquired on a 3T MRI system. With DIESIS, 17O MR signal time curves in selected regions were directly estimated based on parcellation of a coregistered 1H MPRAGE image.
Results
Profile likelihood analysis of the DIESIS method showed identifiability of CMRO2. In white matter (WM), DIESES reduced CMRO2 from 0.97 ± 0.25 µmol/gtissue/min with Kaiser‐Bessel gridding reconstruction to 0.85 ± 0.21 µmol/gtissue/min, whereas in gray matter (GM) it increases from 1.3 ± 0.31 µmol/gtissue/min to 1.86 ± 0.36 µmol/gtissue/min; both values are closer to the literature values from the 15O‐PET studies.
Conclusion
DIESIS provided an increased separation of CMRO2 values in GM and WM brain regions and corrected for partial volume effects in 17O‐MRI inhalation experiments. DIESIS could also be applied to more heterogeneous tissues such as glioblastomas if subregions of the tumor can be represented as additional parcels.</abstract><cop>Hoboken</cop><pub>Wiley Subscription Services, Inc</pub><doi>10.1002/mrm.27224</doi><tpages>9</tpages></addata></record> |
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source | Wiley Online Library Journals Frontfile Complete; Wiley Online Library Free Content |
subjects | 17O MRI Brain Brain tumors cerebral metabolic rate of oxygen consumption (CMRO2) Data processing Decay rate Image processing Inhalation Magnetic resonance imaging Medical imaging Metabolism Neurodegenerative diseases Neurological diseases non‐proton MRI Oxygen consumption Oxygen metabolism partial volume correction Positron emission tomography Respiration Substantia alba Substantia grisea Tumors |
title | Direct estimation of 17O MR images (DIESIS) for quantification of oxygen metabolism in the human brain with partial volume correction |
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