Global and local reactivity descriptors based on quadratic and linear energy models for α,β‐unsaturated organic compounds
Global and local descriptors of chemical reactivity can be derived from conceptual density functional theory. Their explicit form, however, depends on how the energy is defined as a function of the number of electrons. Within the existing interpolation models, here, the quadratic and the linear ener...
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description | Global and local descriptors of chemical reactivity can be derived from conceptual density functional theory. Their explicit form, however, depends on how the energy is defined as a function of the number of electrons. Within the existing interpolation models, here, the quadratic and the linear energy model were used to derive global descriptors as the electrophilicity and nucleophilicity (defined as the negative of the ionization potential) and local descriptors employing either the corresponding condensed Fukui function in the linear model or the local response of the global descriptor in the quadratic model. The ability of these descriptors to predict the reactivity of molecules with more than one reactive site was first studied on a set of α, β‐unsaturated ketones, where experimental rate constants for the nucleophilic attack is known. With the validated descriptors the reactivity of α, β‐unsaturated carboxylic compounds with different heteroatoms as α, β‐unsaturated thioesters, esters, and amides was addressed as alternative substrates for enzymatic CO2 fixation. Carbon dioxide fixation involves the reduction of the neutral α, β‐unsaturated carboxylic compounds by a nucleophilic attack of a hydride anion from NADPH and the following electrophilic attack by carbon dioxide. It was found that condensed values of the linear Fukui function within the fragment of molecular response approximation describe best the reactivity of α, β‐unsaturated ketones. For the two relevant processes involved in CO2 fixation the amides present the largest reactivity in vacuum and in aqueous solution compared to the esters and thioesters and may, therefore, serve as alternative substrates of carboxylases.
Different global and local reactivity descriptors based on conceptual DFT were used to study the nucleophilic attack on α, β‐unsaturated organic compounds. From the two possible reactive sites (red circles) the condensed Fukui function f+(r) computed by the fragment of molecular response approach locates correctly the preferred reaction site and correlates with the experimental reactivity trend. |
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Different global and local reactivity descriptors based on conceptual DFT were used to study the nucleophilic attack on α, β‐unsaturated organic compounds. From the two possible reactive sites (red circles) the condensed Fukui function f+(r) computed by the fragment of molecular response approach locates correctly the preferred reaction site and correlates with the experimental reactivity trend.</description><identifier>ISSN: 0020-7608</identifier><identifier>EISSN: 1097-461X</identifier><identifier>DOI: 10.1002/qua.25706</identifier><language>eng</language><publisher>Hoboken, USA: John Wiley & Sons, Inc</publisher><subject>Amides ; Carbon dioxide ; Chemical attack ; Chemistry ; Density functional theory ; Esters ; Fixation ; Fukui function, linear and quadratic energy models, reactivity descriptors, α,β‐unsaturated compounds ; Interpolation ; Ionization potentials ; Ketones ; Organic chemistry ; Organic compounds ; Physical chemistry ; Quantum physics ; Rate constants ; Reactivity ; Substrates ; Thioesters</subject><ispartof>International journal of quantum chemistry, 2018-10, Vol.118 (20), p.n/a</ispartof><rights>2018 Wiley Periodicals, Inc.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c2976-77d4178e24ffa8d56738093db04af943822b9608ed1c029a5cc6ff8fd0d023243</citedby><cites>FETCH-LOGICAL-c2976-77d4178e24ffa8d56738093db04af943822b9608ed1c029a5cc6ff8fd0d023243</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1002%2Fqua.25706$$EPDF$$P50$$Gwiley$$H</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1002%2Fqua.25706$$EHTML$$P50$$Gwiley$$H</linktohtml><link.rule.ids>314,776,780,1411,27903,27904,45552,45553</link.rule.ids></links><search><creatorcontrib>Oller, Javier</creatorcontrib><creatorcontrib>Pérez, Patricia</creatorcontrib><creatorcontrib>Ayers, Paul W.</creatorcontrib><creatorcontrib>Vöhringer‐Martinez, Esteban</creatorcontrib><title>Global and local reactivity descriptors based on quadratic and linear energy models for α,β‐unsaturated organic compounds</title><title>International journal of quantum chemistry</title><description>Global and local descriptors of chemical reactivity can be derived from conceptual density functional theory. Their explicit form, however, depends on how the energy is defined as a function of the number of electrons. Within the existing interpolation models, here, the quadratic and the linear energy model were used to derive global descriptors as the electrophilicity and nucleophilicity (defined as the negative of the ionization potential) and local descriptors employing either the corresponding condensed Fukui function in the linear model or the local response of the global descriptor in the quadratic model. The ability of these descriptors to predict the reactivity of molecules with more than one reactive site was first studied on a set of α, β‐unsaturated ketones, where experimental rate constants for the nucleophilic attack is known. With the validated descriptors the reactivity of α, β‐unsaturated carboxylic compounds with different heteroatoms as α, β‐unsaturated thioesters, esters, and amides was addressed as alternative substrates for enzymatic CO2 fixation. Carbon dioxide fixation involves the reduction of the neutral α, β‐unsaturated carboxylic compounds by a nucleophilic attack of a hydride anion from NADPH and the following electrophilic attack by carbon dioxide. It was found that condensed values of the linear Fukui function within the fragment of molecular response approximation describe best the reactivity of α, β‐unsaturated ketones. For the two relevant processes involved in CO2 fixation the amides present the largest reactivity in vacuum and in aqueous solution compared to the esters and thioesters and may, therefore, serve as alternative substrates of carboxylases.
Different global and local reactivity descriptors based on conceptual DFT were used to study the nucleophilic attack on α, β‐unsaturated organic compounds. From the two possible reactive sites (red circles) the condensed Fukui function f+(r) computed by the fragment of molecular response approach locates correctly the preferred reaction site and correlates with the experimental reactivity trend.</description><subject>Amides</subject><subject>Carbon dioxide</subject><subject>Chemical attack</subject><subject>Chemistry</subject><subject>Density functional theory</subject><subject>Esters</subject><subject>Fixation</subject><subject>Fukui function, linear and quadratic energy models, reactivity descriptors, α,β‐unsaturated compounds</subject><subject>Interpolation</subject><subject>Ionization potentials</subject><subject>Ketones</subject><subject>Organic chemistry</subject><subject>Organic compounds</subject><subject>Physical chemistry</subject><subject>Quantum physics</subject><subject>Rate constants</subject><subject>Reactivity</subject><subject>Substrates</subject><subject>Thioesters</subject><issn>0020-7608</issn><issn>1097-461X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2018</creationdate><recordtype>article</recordtype><recordid>eNp1kM9Kw0AQhxdRsFYPvsGCJ8G0k910NzkW0SoURLDgLWz2T0lJs-1uouQg-Ai-ij5IH8IncWu8epqB-b4Z5ofQeQyjGICMt60YkQkHdoAGMWQ8Slj8fIgGYQYRZ5AeoxPvVwDAKOMD9DarbCEqLGqFKytD57SQTflSNh1W2ktXbhrrPC6E1wrbGocLyommlL1T1lo4rGvtlh1eW6Urj411ePd5tfv6fv9oay-aNgh72y1FHURp1xvb1sqfoiMjKq_P_uoQLW5vnq7vovnD7P56Oo8kyTiLOFdJzFNNEmNEqiaM0xQyqgpIhMkSmhJSZOE3rWIJJBMTKZkxqVGggFCS0CG66PdunN222jf5yrauDidzEhPKgFKWBuqyp6Sz3jtt8o0r18J1eQz5Pt08_J7_phvYcc--lpXu_gfzx8W0N34Aig1_9g</recordid><startdate>20181015</startdate><enddate>20181015</enddate><creator>Oller, Javier</creator><creator>Pérez, Patricia</creator><creator>Ayers, Paul W.</creator><creator>Vöhringer‐Martinez, Esteban</creator><general>John Wiley & Sons, Inc</general><general>Wiley Subscription Services, Inc</general><scope>AAYXX</scope><scope>CITATION</scope></search><sort><creationdate>20181015</creationdate><title>Global and local reactivity descriptors based on quadratic and linear energy models for α,β‐unsaturated organic compounds</title><author>Oller, Javier ; Pérez, Patricia ; Ayers, Paul W. ; Vöhringer‐Martinez, Esteban</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c2976-77d4178e24ffa8d56738093db04af943822b9608ed1c029a5cc6ff8fd0d023243</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2018</creationdate><topic>Amides</topic><topic>Carbon dioxide</topic><topic>Chemical attack</topic><topic>Chemistry</topic><topic>Density functional theory</topic><topic>Esters</topic><topic>Fixation</topic><topic>Fukui function, linear and quadratic energy models, reactivity descriptors, α,β‐unsaturated compounds</topic><topic>Interpolation</topic><topic>Ionization potentials</topic><topic>Ketones</topic><topic>Organic chemistry</topic><topic>Organic compounds</topic><topic>Physical chemistry</topic><topic>Quantum physics</topic><topic>Rate constants</topic><topic>Reactivity</topic><topic>Substrates</topic><topic>Thioesters</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Oller, Javier</creatorcontrib><creatorcontrib>Pérez, Patricia</creatorcontrib><creatorcontrib>Ayers, Paul W.</creatorcontrib><creatorcontrib>Vöhringer‐Martinez, Esteban</creatorcontrib><collection>CrossRef</collection><jtitle>International journal of quantum chemistry</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Oller, Javier</au><au>Pérez, Patricia</au><au>Ayers, Paul W.</au><au>Vöhringer‐Martinez, Esteban</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Global and local reactivity descriptors based on quadratic and linear energy models for α,β‐unsaturated organic compounds</atitle><jtitle>International journal of quantum chemistry</jtitle><date>2018-10-15</date><risdate>2018</risdate><volume>118</volume><issue>20</issue><epage>n/a</epage><issn>0020-7608</issn><eissn>1097-461X</eissn><abstract>Global and local descriptors of chemical reactivity can be derived from conceptual density functional theory. Their explicit form, however, depends on how the energy is defined as a function of the number of electrons. Within the existing interpolation models, here, the quadratic and the linear energy model were used to derive global descriptors as the electrophilicity and nucleophilicity (defined as the negative of the ionization potential) and local descriptors employing either the corresponding condensed Fukui function in the linear model or the local response of the global descriptor in the quadratic model. The ability of these descriptors to predict the reactivity of molecules with more than one reactive site was first studied on a set of α, β‐unsaturated ketones, where experimental rate constants for the nucleophilic attack is known. With the validated descriptors the reactivity of α, β‐unsaturated carboxylic compounds with different heteroatoms as α, β‐unsaturated thioesters, esters, and amides was addressed as alternative substrates for enzymatic CO2 fixation. Carbon dioxide fixation involves the reduction of the neutral α, β‐unsaturated carboxylic compounds by a nucleophilic attack of a hydride anion from NADPH and the following electrophilic attack by carbon dioxide. It was found that condensed values of the linear Fukui function within the fragment of molecular response approximation describe best the reactivity of α, β‐unsaturated ketones. For the two relevant processes involved in CO2 fixation the amides present the largest reactivity in vacuum and in aqueous solution compared to the esters and thioesters and may, therefore, serve as alternative substrates of carboxylases.
Different global and local reactivity descriptors based on conceptual DFT were used to study the nucleophilic attack on α, β‐unsaturated organic compounds. From the two possible reactive sites (red circles) the condensed Fukui function f+(r) computed by the fragment of molecular response approach locates correctly the preferred reaction site and correlates with the experimental reactivity trend.</abstract><cop>Hoboken, USA</cop><pub>John Wiley & Sons, Inc</pub><doi>10.1002/qua.25706</doi><tpages>13</tpages></addata></record> |
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subjects | Amides Carbon dioxide Chemical attack Chemistry Density functional theory Esters Fixation Fukui function, linear and quadratic energy models, reactivity descriptors, α,β‐unsaturated compounds Interpolation Ionization potentials Ketones Organic chemistry Organic compounds Physical chemistry Quantum physics Rate constants Reactivity Substrates Thioesters |
title | Global and local reactivity descriptors based on quadratic and linear energy models for α,β‐unsaturated organic compounds |
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