Isolation and cross-amplification of the first set of polymorphic microsatellite markers of two high-Andean cushion plants
In the southern Andes mountains (27– 39 ∘ S ) Azorella madreporica and Laretia acaulis , two Apiaceae cushion plant species commonly known as yaretas , conform a well-established altitudinal vegetation belt along the lower Andean zone. These species have been considered as fundamental components of...
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| Veröffentlicht in: | Journal of genetics 2018-12, Vol.97 (Suppl 1), p.95-100 |
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| creator | Acuña-Rodríguez, Ian S. Gouin, Nicolas Cifuentes-Lisboa, Leonardo Squeo, Francisco A. |
| description | In the southern Andes mountains (27–
39
∘
S
)
Azorella madreporica
and
Laretia acaulis
, two Apiaceae cushion plant species commonly known as
yaretas
, conform a well-established altitudinal vegetation belt along the lower Andean zone. These species have been considered as fundamental components of several ecological dynamics within their communities; however, high-mountain ecosystems are increasingly threatened worldwide by natural and anthropogenic pressures and the southern Andes are not the exception. Recognizing that genetic information is crucial for the success of any conservation or restoration initiative in wild populations, we developed and cross-amplified 28 specifically designed microsatellite markers (14 in
A. madreporica
and 14 in
L. acaulis
), and also tested the cross amplification of 25 markers from the related species
Azorella selago
. In a region which is particularly vulnerable to global change trends, this new polymorphic microsatellite loci will be useful in the study of the genetic diversity of these high-mountain cushion plants, which are pivotal in the structuring of their native ecosystems. |
| doi_str_mv | 10.1007/s12041-018-0999-4 |
| format | Article |
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39
∘
S
)
Azorella madreporica
and
Laretia acaulis
, two Apiaceae cushion plant species commonly known as
yaretas
, conform a well-established altitudinal vegetation belt along the lower Andean zone. These species have been considered as fundamental components of several ecological dynamics within their communities; however, high-mountain ecosystems are increasingly threatened worldwide by natural and anthropogenic pressures and the southern Andes are not the exception. Recognizing that genetic information is crucial for the success of any conservation or restoration initiative in wild populations, we developed and cross-amplified 28 specifically designed microsatellite markers (14 in
A. madreporica
and 14 in
L. acaulis
), and also tested the cross amplification of 25 markers from the related species
Azorella selago
. In a region which is particularly vulnerable to global change trends, this new polymorphic microsatellite loci will be useful in the study of the genetic diversity of these high-mountain cushion plants, which are pivotal in the structuring of their native ecosystems.</description><identifier>ISSN: 0022-1333</identifier><identifier>EISSN: 0973-7731</identifier><identifier>DOI: 10.1007/s12041-018-0999-4</identifier><language>eng</language><publisher>New Delhi: Springer India</publisher><subject>Alpine ecosystems ; Animal Genetics and Genomics ; Biomedical and Life Sciences ; Ecosystems ; Evolutionary Biology ; Genetic diversity ; Genetic markers ; Life Sciences ; Microbial Genetics and Genomics ; Microsatellites ; Mountain ecology ; Online Resources ; Plant Genetics and Genomics ; Species</subject><ispartof>Journal of genetics, 2018-12, Vol.97 (Suppl 1), p.95-100</ispartof><rights>Indian Academy of Sciences 2018</rights><rights>COPYRIGHT 2018 Springer</rights><rights>Journal of Genetics is a copyright of Springer, (2018). All Rights Reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c383t-ab537712aba60ea3aed2d4e7fd5cdf579e1458833db2fcc8df283897afc1519b3</citedby><cites>FETCH-LOGICAL-c383t-ab537712aba60ea3aed2d4e7fd5cdf579e1458833db2fcc8df283897afc1519b3</cites><orcidid>0000-0001-5380-895X</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s12041-018-0999-4$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s12041-018-0999-4$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,777,781,27905,27906,41469,42538,51300</link.rule.ids></links><search><creatorcontrib>Acuña-Rodríguez, Ian S.</creatorcontrib><creatorcontrib>Gouin, Nicolas</creatorcontrib><creatorcontrib>Cifuentes-Lisboa, Leonardo</creatorcontrib><creatorcontrib>Squeo, Francisco A.</creatorcontrib><title>Isolation and cross-amplification of the first set of polymorphic microsatellite markers of two high-Andean cushion plants</title><title>Journal of genetics</title><addtitle>J Genet</addtitle><description>In the southern Andes mountains (27–
39
∘
S
)
Azorella madreporica
and
Laretia acaulis
, two Apiaceae cushion plant species commonly known as
yaretas
, conform a well-established altitudinal vegetation belt along the lower Andean zone. These species have been considered as fundamental components of several ecological dynamics within their communities; however, high-mountain ecosystems are increasingly threatened worldwide by natural and anthropogenic pressures and the southern Andes are not the exception. Recognizing that genetic information is crucial for the success of any conservation or restoration initiative in wild populations, we developed and cross-amplified 28 specifically designed microsatellite markers (14 in
A. madreporica
and 14 in
L. acaulis
), and also tested the cross amplification of 25 markers from the related species
Azorella selago
. In a region which is particularly vulnerable to global change trends, this new polymorphic microsatellite loci will be useful in the study of the genetic diversity of these high-mountain cushion plants, which are pivotal in the structuring of their native ecosystems.</description><subject>Alpine ecosystems</subject><subject>Animal Genetics and Genomics</subject><subject>Biomedical and Life Sciences</subject><subject>Ecosystems</subject><subject>Evolutionary Biology</subject><subject>Genetic diversity</subject><subject>Genetic markers</subject><subject>Life Sciences</subject><subject>Microbial Genetics and Genomics</subject><subject>Microsatellites</subject><subject>Mountain ecology</subject><subject>Online Resources</subject><subject>Plant Genetics and Genomics</subject><subject>Species</subject><issn>0022-1333</issn><issn>0973-7731</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2018</creationdate><recordtype>article</recordtype><sourceid>8G5</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><sourceid>GUQSH</sourceid><sourceid>M2O</sourceid><recordid>eNp1kU1rHSEYhYeSQpO0P6A7oWtTP2aqLi-hTS4EsknX4tXXO6YzOlUvJf31dTKFUGhwoR7O8yrndN1HSq4oIeJzoYz0FBMqMVFK4f5Nd06U4FgITs_amTCGKef8XXdRyuN6FYSdd7_3JU2mhhSRiQ7ZnErBZl6m4IPd9ORRHQH5kEtFBeoqLGl6mlNexmDRHFbKVJimUAHNJv-AXJ6xXwmN4TjiXXRgIrKnMq4Tl8nEWt53b72ZCnz4u1923799fbi-xXf3N_vr3R22XPKKzWHgQlBmDuYLAcMNOOZ6EN4N1vlBKKD9ICXn7sC8tdJ5JrlUwnhLB6oO_LL7tM1dcvp5glL1Yzrl2J7UjFLBBiH74cV1NBPoEH2q2dg5FKt3ggpJFRlUc139x9WWgxZDiuBD0_8B6AY8J5vB6yWHFtGTpkSvzemtOd2a02tzum8M25jSvPEI-eXDr0N_ABuOnPQ</recordid><startdate>20181201</startdate><enddate>20181201</enddate><creator>Acuña-Rodríguez, Ian S.</creator><creator>Gouin, Nicolas</creator><creator>Cifuentes-Lisboa, Leonardo</creator><creator>Squeo, Francisco A.</creator><general>Springer India</general><general>Springer</general><general>Springer Nature B.V</general><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7SS</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>8AO</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>8G5</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>GUQSH</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M2O</scope><scope>M7P</scope><scope>MBDVC</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>Q9U</scope><scope>RC3</scope><orcidid>https://orcid.org/0000-0001-5380-895X</orcidid></search><sort><creationdate>20181201</creationdate><title>Isolation and cross-amplification of the first set of polymorphic microsatellite markers of two high-Andean cushion plants</title><author>Acuña-Rodríguez, Ian S. ; Gouin, Nicolas ; Cifuentes-Lisboa, Leonardo ; Squeo, Francisco A.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c383t-ab537712aba60ea3aed2d4e7fd5cdf579e1458833db2fcc8df283897afc1519b3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2018</creationdate><topic>Alpine ecosystems</topic><topic>Animal Genetics and Genomics</topic><topic>Biomedical and Life Sciences</topic><topic>Ecosystems</topic><topic>Evolutionary Biology</topic><topic>Genetic diversity</topic><topic>Genetic markers</topic><topic>Life Sciences</topic><topic>Microbial Genetics and Genomics</topic><topic>Microsatellites</topic><topic>Mountain ecology</topic><topic>Online Resources</topic><topic>Plant Genetics and Genomics</topic><topic>Species</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Acuña-Rodríguez, Ian S.</creatorcontrib><creatorcontrib>Gouin, Nicolas</creatorcontrib><creatorcontrib>Cifuentes-Lisboa, Leonardo</creatorcontrib><creatorcontrib>Squeo, Francisco A.</creatorcontrib><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Entomology Abstracts (Full archive)</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>Research Library (Alumni Edition)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>Research Library Prep</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Research Library</collection><collection>Biological Science Database</collection><collection>Research Library (Corporate)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>ProQuest Central Basic</collection><collection>Genetics Abstracts</collection><jtitle>Journal of genetics</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Acuña-Rodríguez, Ian S.</au><au>Gouin, Nicolas</au><au>Cifuentes-Lisboa, Leonardo</au><au>Squeo, Francisco A.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Isolation and cross-amplification of the first set of polymorphic microsatellite markers of two high-Andean cushion plants</atitle><jtitle>Journal of genetics</jtitle><stitle>J Genet</stitle><date>2018-12-01</date><risdate>2018</risdate><volume>97</volume><issue>Suppl 1</issue><spage>95</spage><epage>100</epage><pages>95-100</pages><issn>0022-1333</issn><eissn>0973-7731</eissn><abstract>In the southern Andes mountains (27–
39
∘
S
)
Azorella madreporica
and
Laretia acaulis
, two Apiaceae cushion plant species commonly known as
yaretas
, conform a well-established altitudinal vegetation belt along the lower Andean zone. These species have been considered as fundamental components of several ecological dynamics within their communities; however, high-mountain ecosystems are increasingly threatened worldwide by natural and anthropogenic pressures and the southern Andes are not the exception. Recognizing that genetic information is crucial for the success of any conservation or restoration initiative in wild populations, we developed and cross-amplified 28 specifically designed microsatellite markers (14 in
A. madreporica
and 14 in
L. acaulis
), and also tested the cross amplification of 25 markers from the related species
Azorella selago
. In a region which is particularly vulnerable to global change trends, this new polymorphic microsatellite loci will be useful in the study of the genetic diversity of these high-mountain cushion plants, which are pivotal in the structuring of their native ecosystems.</abstract><cop>New Delhi</cop><pub>Springer India</pub><doi>10.1007/s12041-018-0999-4</doi><tpages>6</tpages><orcidid>https://orcid.org/0000-0001-5380-895X</orcidid></addata></record> |
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| ispartof | Journal of genetics, 2018-12, Vol.97 (Suppl 1), p.95-100 |
| issn | 0022-1333 0973-7731 |
| language | eng |
| recordid | cdi_proquest_journals_2117257845 |
| source | Indian Academy of Sciences; Springer Nature - Complete Springer Journals; EZB-FREE-00999 freely available EZB journals |
| subjects | Alpine ecosystems Animal Genetics and Genomics Biomedical and Life Sciences Ecosystems Evolutionary Biology Genetic diversity Genetic markers Life Sciences Microbial Genetics and Genomics Microsatellites Mountain ecology Online Resources Plant Genetics and Genomics Species |
| title | Isolation and cross-amplification of the first set of polymorphic microsatellite markers of two high-Andean cushion plants |
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