What governs the fluidic behavior of water near single DNA molecules at the micro/nano scale

The fluidic behavior of water at the micro/nano scale is studied by using of single DNA molecules as a model system. Stable curved DNA patterns with spans about one micron were generated by using of water flows, and observed by Atomic Force Microscopy. By rigorously comparing the numerical simulatio...

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Veröffentlicht in:arXiv.org 2006-07
Hauptverfasser: Zhang, Yi, Li, Huabing, Lei, Xiaoling, Lv, Junhong, Ai, Xiaobai, Hu, Jun, Chen, Shiyi, Fang Haiping
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Li, Huabing
Lei, Xiaoling
Lv, Junhong
Ai, Xiaobai
Hu, Jun
Chen, Shiyi
Fang Haiping
description The fluidic behavior of water at the micro/nano scale is studied by using of single DNA molecules as a model system. Stable curved DNA patterns with spans about one micron were generated by using of water flows, and observed by Atomic Force Microscopy. By rigorously comparing the numerical simulation results with these patterns, it is suggested that the form of the macroscopic hydrodynamic equation still works quantitatively well on the fluid flows at the nanoscale. The molecular effects, however, are still apparent that the effective viscosity of the adjacent water is considerably larger than its bulk value. Our observation is also helpful to understand of the dynamics of biomolecules in solutions from nanoscale to microscale.
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subjects Atomic force microscopy
Biomolecules
Computer simulation
Deoxyribonucleic acid
DNA
Hydrodynamic equations
Mathematical models
title What governs the fluidic behavior of water near single DNA molecules at the micro/nano scale
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