Non-labeled selective virus detection with novel SERS-active porous silver nanofilms fabricated by Electron Beam Physical Vapor Deposition
[Display omitted] •A novel silver SERS substrate was fabricated by EBPVD method and characterized.•The substrate contains nanoscale pore-like structures and cavities, separated by rough surface.•The novel SERS substrate was proposed for detection of viruses and tested, SERS spectra of four viruses w...
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creator | Durmanov, Nikolay N. Guliev, Rustam R. Eremenko, Arkady V. Boginskaya, Irina A. Ryzhikov, Ilya A. Trifonova, Ekaterina A. Putlyaev, Egor V. Mukhin, Aleksei N. Kalnov, Sergey L. Balandina, Marina V. Tkachuk, Artem P. Gushchin, Vladimir A. Sarychev, Andrey K. Lagarkov, Andrey N. Rodionov, Ilya A. Gabidullin, Aidar R. Kurochkin, Ilya N. |
description | [Display omitted]
•A novel silver SERS substrate was fabricated by EBPVD method and characterized.•The substrate contains nanoscale pore-like structures and cavities, separated by rough surface.•The novel SERS substrate was proposed for detection of viruses and tested, SERS spectra of four viruses were obtained and processed.•Data analysis showed complete differentiation between viral species based on their spectral data.
Virus detection is often performed using antibody-based and polymerase chain reaction-based techniques. Such methods have major deficiencies, caused by time-consuming and labor-intensive incubation and purification steps. In this contribution, a novel SERS substrate for qualitative virus detection was developed and described. The substrate is composed of a thin silver film with folded surface structure containing pore-like nanoscale cavities and indentations, deposited on mica substrate by electron beam physical vapor deposition method. Pore-like structures are semi-regularly arrayed, with a rough surface in between, allowing for SERS activity, and their size and periodicity can be manipulated in the manufacturing process. It was speculated that viral particles could be trapped in these structures and would generate easily detectable enhanced Raman signals. The SERS substrate was tested against detection of four virus species – rabbit myxomatosis virus, canine distemper virus, tobacco mosaic virus and potato virus X. Specific spectra were obtained and analyzed for each virus. Data analysis demonstrated successful differentiation between tested species. The reported results demonstrate that novel SERS substrate is suitable for detection and identification of viral particles. |
doi_str_mv | 10.1016/j.snb.2017.10.022 |
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•A novel silver SERS substrate was fabricated by EBPVD method and characterized.•The substrate contains nanoscale pore-like structures and cavities, separated by rough surface.•The novel SERS substrate was proposed for detection of viruses and tested, SERS spectra of four viruses were obtained and processed.•Data analysis showed complete differentiation between viral species based on their spectral data.
Virus detection is often performed using antibody-based and polymerase chain reaction-based techniques. Such methods have major deficiencies, caused by time-consuming and labor-intensive incubation and purification steps. In this contribution, a novel SERS substrate for qualitative virus detection was developed and described. The substrate is composed of a thin silver film with folded surface structure containing pore-like nanoscale cavities and indentations, deposited on mica substrate by electron beam physical vapor deposition method. Pore-like structures are semi-regularly arrayed, with a rough surface in between, allowing for SERS activity, and their size and periodicity can be manipulated in the manufacturing process. It was speculated that viral particles could be trapped in these structures and would generate easily detectable enhanced Raman signals. The SERS substrate was tested against detection of four virus species – rabbit myxomatosis virus, canine distemper virus, tobacco mosaic virus and potato virus X. Specific spectra were obtained and analyzed for each virus. Data analysis demonstrated successful differentiation between tested species. The reported results demonstrate that novel SERS substrate is suitable for detection and identification of viral particles.</description><identifier>ISSN: 0925-4005</identifier><identifier>EISSN: 1873-3077</identifier><identifier>DOI: 10.1016/j.snb.2017.10.022</identifier><language>eng</language><publisher>Lausanne: Elsevier B.V</publisher><subject>Biosensing ; Biosensors ; Chemical vapor deposition ; Data analysis ; Electron beams ; Electron-beam physical vapor deposition ; Electrons ; Mica ; Periodic variations ; Physical vapor deposition ; Polymerase chain reaction ; Potatoes ; Raman spectroscopy ; SERS ; Substrates ; Surface structure ; Thin films ; Tobacco ; Viruses</subject><ispartof>Sensors and actuators. B, Chemical, 2018-03, Vol.257, p.37-47</ispartof><rights>2017</rights><rights>Copyright Elsevier Science Ltd. Mar 2018</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c325t-ec426f81054b6cd3adf688ba55f4e50c02b8b627852f2ceb627c10fa2bc8a1a3</citedby><cites>FETCH-LOGICAL-c325t-ec426f81054b6cd3adf688ba55f4e50c02b8b627852f2ceb627c10fa2bc8a1a3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://dx.doi.org/10.1016/j.snb.2017.10.022$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>315,782,786,3554,27933,27934,46004</link.rule.ids></links><search><creatorcontrib>Durmanov, Nikolay N.</creatorcontrib><creatorcontrib>Guliev, Rustam R.</creatorcontrib><creatorcontrib>Eremenko, Arkady V.</creatorcontrib><creatorcontrib>Boginskaya, Irina A.</creatorcontrib><creatorcontrib>Ryzhikov, Ilya A.</creatorcontrib><creatorcontrib>Trifonova, Ekaterina A.</creatorcontrib><creatorcontrib>Putlyaev, Egor V.</creatorcontrib><creatorcontrib>Mukhin, Aleksei N.</creatorcontrib><creatorcontrib>Kalnov, Sergey L.</creatorcontrib><creatorcontrib>Balandina, Marina V.</creatorcontrib><creatorcontrib>Tkachuk, Artem P.</creatorcontrib><creatorcontrib>Gushchin, Vladimir A.</creatorcontrib><creatorcontrib>Sarychev, Andrey K.</creatorcontrib><creatorcontrib>Lagarkov, Andrey N.</creatorcontrib><creatorcontrib>Rodionov, Ilya A.</creatorcontrib><creatorcontrib>Gabidullin, Aidar R.</creatorcontrib><creatorcontrib>Kurochkin, Ilya N.</creatorcontrib><title>Non-labeled selective virus detection with novel SERS-active porous silver nanofilms fabricated by Electron Beam Physical Vapor Deposition</title><title>Sensors and actuators. B, Chemical</title><description>[Display omitted]
•A novel silver SERS substrate was fabricated by EBPVD method and characterized.•The substrate contains nanoscale pore-like structures and cavities, separated by rough surface.•The novel SERS substrate was proposed for detection of viruses and tested, SERS spectra of four viruses were obtained and processed.•Data analysis showed complete differentiation between viral species based on their spectral data.
Virus detection is often performed using antibody-based and polymerase chain reaction-based techniques. Such methods have major deficiencies, caused by time-consuming and labor-intensive incubation and purification steps. In this contribution, a novel SERS substrate for qualitative virus detection was developed and described. The substrate is composed of a thin silver film with folded surface structure containing pore-like nanoscale cavities and indentations, deposited on mica substrate by electron beam physical vapor deposition method. Pore-like structures are semi-regularly arrayed, with a rough surface in between, allowing for SERS activity, and their size and periodicity can be manipulated in the manufacturing process. It was speculated that viral particles could be trapped in these structures and would generate easily detectable enhanced Raman signals. The SERS substrate was tested against detection of four virus species – rabbit myxomatosis virus, canine distemper virus, tobacco mosaic virus and potato virus X. Specific spectra were obtained and analyzed for each virus. Data analysis demonstrated successful differentiation between tested species. The reported results demonstrate that novel SERS substrate is suitable for detection and identification of viral particles.</description><subject>Biosensing</subject><subject>Biosensors</subject><subject>Chemical vapor deposition</subject><subject>Data analysis</subject><subject>Electron beams</subject><subject>Electron-beam physical vapor deposition</subject><subject>Electrons</subject><subject>Mica</subject><subject>Periodic variations</subject><subject>Physical vapor deposition</subject><subject>Polymerase chain reaction</subject><subject>Potatoes</subject><subject>Raman spectroscopy</subject><subject>SERS</subject><subject>Substrates</subject><subject>Surface structure</subject><subject>Thin films</subject><subject>Tobacco</subject><subject>Viruses</subject><issn>0925-4005</issn><issn>1873-3077</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2018</creationdate><recordtype>article</recordtype><recordid>eNp9kMFuGyEQhlHVSnWdPkBuSDmvM7ALu1FOqes0kaymiq1eEbCDjLVeXFhv5FfIU5eVe-6FYYb__wd9hFwzWDBg8na_SL1ZcGB17hfA-QcyY01dFiXU9UcygzsuigpAfCZfUtoDQFVKmJH3n6EvOm2ww5amfNrBj0hHH0-JtjhMfejpmx92tA8jdnSzet0U-iI7hhiyLvluxEh73Qfnu0OiTpvorR5ypjnT1ZQac8o31Af6a3dO-a2jv3W20-94DMlPS67IJ6e7hF__1TnZPq62y6di_fLjefmwLmzJxVCgrbh0DQNRGWnbUrdONo3RQrgKBVjgpjGS143gjlucrpaB09zYRjNdzsnNJfYYw58TpkHtwyn2eaPiIAUIKcs6q9hFZWNIKaJTx-gPOp4VAzURV3uViauJ-DTKxLPn_uLB_PvRY1TJeuwttj5mAqoN_j_uvxGyi-4</recordid><startdate>201803</startdate><enddate>201803</enddate><creator>Durmanov, Nikolay N.</creator><creator>Guliev, Rustam R.</creator><creator>Eremenko, Arkady V.</creator><creator>Boginskaya, Irina A.</creator><creator>Ryzhikov, Ilya A.</creator><creator>Trifonova, Ekaterina A.</creator><creator>Putlyaev, Egor V.</creator><creator>Mukhin, Aleksei N.</creator><creator>Kalnov, Sergey L.</creator><creator>Balandina, Marina V.</creator><creator>Tkachuk, Artem P.</creator><creator>Gushchin, Vladimir A.</creator><creator>Sarychev, Andrey K.</creator><creator>Lagarkov, Andrey N.</creator><creator>Rodionov, Ilya A.</creator><creator>Gabidullin, Aidar R.</creator><creator>Kurochkin, Ilya N.</creator><general>Elsevier B.V</general><general>Elsevier Science Ltd</general><scope>AAYXX</scope><scope>CITATION</scope><scope>7SP</scope><scope>7SR</scope><scope>7TB</scope><scope>7U5</scope><scope>8BQ</scope><scope>8FD</scope><scope>FR3</scope><scope>JG9</scope><scope>L7M</scope></search><sort><creationdate>201803</creationdate><title>Non-labeled selective virus detection with novel SERS-active porous silver nanofilms fabricated by Electron Beam Physical Vapor Deposition</title><author>Durmanov, Nikolay N. ; Guliev, Rustam R. ; Eremenko, Arkady V. ; Boginskaya, Irina A. ; Ryzhikov, Ilya A. ; Trifonova, Ekaterina A. ; Putlyaev, Egor V. ; Mukhin, Aleksei N. ; Kalnov, Sergey L. ; Balandina, Marina V. ; Tkachuk, Artem P. ; Gushchin, Vladimir A. ; Sarychev, Andrey K. ; Lagarkov, Andrey N. ; Rodionov, Ilya A. ; Gabidullin, Aidar R. ; Kurochkin, Ilya N.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c325t-ec426f81054b6cd3adf688ba55f4e50c02b8b627852f2ceb627c10fa2bc8a1a3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2018</creationdate><topic>Biosensing</topic><topic>Biosensors</topic><topic>Chemical vapor deposition</topic><topic>Data analysis</topic><topic>Electron beams</topic><topic>Electron-beam physical vapor deposition</topic><topic>Electrons</topic><topic>Mica</topic><topic>Periodic variations</topic><topic>Physical vapor deposition</topic><topic>Polymerase chain reaction</topic><topic>Potatoes</topic><topic>Raman spectroscopy</topic><topic>SERS</topic><topic>Substrates</topic><topic>Surface structure</topic><topic>Thin films</topic><topic>Tobacco</topic><topic>Viruses</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Durmanov, Nikolay N.</creatorcontrib><creatorcontrib>Guliev, Rustam R.</creatorcontrib><creatorcontrib>Eremenko, Arkady V.</creatorcontrib><creatorcontrib>Boginskaya, Irina A.</creatorcontrib><creatorcontrib>Ryzhikov, Ilya A.</creatorcontrib><creatorcontrib>Trifonova, Ekaterina A.</creatorcontrib><creatorcontrib>Putlyaev, Egor V.</creatorcontrib><creatorcontrib>Mukhin, Aleksei N.</creatorcontrib><creatorcontrib>Kalnov, Sergey L.</creatorcontrib><creatorcontrib>Balandina, Marina V.</creatorcontrib><creatorcontrib>Tkachuk, Artem P.</creatorcontrib><creatorcontrib>Gushchin, Vladimir A.</creatorcontrib><creatorcontrib>Sarychev, Andrey K.</creatorcontrib><creatorcontrib>Lagarkov, Andrey N.</creatorcontrib><creatorcontrib>Rodionov, Ilya A.</creatorcontrib><creatorcontrib>Gabidullin, Aidar R.</creatorcontrib><creatorcontrib>Kurochkin, Ilya N.</creatorcontrib><collection>CrossRef</collection><collection>Electronics & Communications Abstracts</collection><collection>Engineered Materials Abstracts</collection><collection>Mechanical & Transportation Engineering Abstracts</collection><collection>Solid State and Superconductivity Abstracts</collection><collection>METADEX</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>Materials Research Database</collection><collection>Advanced Technologies Database with Aerospace</collection><jtitle>Sensors and actuators. B, Chemical</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Durmanov, Nikolay N.</au><au>Guliev, Rustam R.</au><au>Eremenko, Arkady V.</au><au>Boginskaya, Irina A.</au><au>Ryzhikov, Ilya A.</au><au>Trifonova, Ekaterina A.</au><au>Putlyaev, Egor V.</au><au>Mukhin, Aleksei N.</au><au>Kalnov, Sergey L.</au><au>Balandina, Marina V.</au><au>Tkachuk, Artem P.</au><au>Gushchin, Vladimir A.</au><au>Sarychev, Andrey K.</au><au>Lagarkov, Andrey N.</au><au>Rodionov, Ilya A.</au><au>Gabidullin, Aidar R.</au><au>Kurochkin, Ilya N.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Non-labeled selective virus detection with novel SERS-active porous silver nanofilms fabricated by Electron Beam Physical Vapor Deposition</atitle><jtitle>Sensors and actuators. B, Chemical</jtitle><date>2018-03</date><risdate>2018</risdate><volume>257</volume><spage>37</spage><epage>47</epage><pages>37-47</pages><issn>0925-4005</issn><eissn>1873-3077</eissn><abstract>[Display omitted]
•A novel silver SERS substrate was fabricated by EBPVD method and characterized.•The substrate contains nanoscale pore-like structures and cavities, separated by rough surface.•The novel SERS substrate was proposed for detection of viruses and tested, SERS spectra of four viruses were obtained and processed.•Data analysis showed complete differentiation between viral species based on their spectral data.
Virus detection is often performed using antibody-based and polymerase chain reaction-based techniques. Such methods have major deficiencies, caused by time-consuming and labor-intensive incubation and purification steps. In this contribution, a novel SERS substrate for qualitative virus detection was developed and described. The substrate is composed of a thin silver film with folded surface structure containing pore-like nanoscale cavities and indentations, deposited on mica substrate by electron beam physical vapor deposition method. Pore-like structures are semi-regularly arrayed, with a rough surface in between, allowing for SERS activity, and their size and periodicity can be manipulated in the manufacturing process. It was speculated that viral particles could be trapped in these structures and would generate easily detectable enhanced Raman signals. The SERS substrate was tested against detection of four virus species – rabbit myxomatosis virus, canine distemper virus, tobacco mosaic virus and potato virus X. Specific spectra were obtained and analyzed for each virus. Data analysis demonstrated successful differentiation between tested species. The reported results demonstrate that novel SERS substrate is suitable for detection and identification of viral particles.</abstract><cop>Lausanne</cop><pub>Elsevier B.V</pub><doi>10.1016/j.snb.2017.10.022</doi><tpages>11</tpages></addata></record> |
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subjects | Biosensing Biosensors Chemical vapor deposition Data analysis Electron beams Electron-beam physical vapor deposition Electrons Mica Periodic variations Physical vapor deposition Polymerase chain reaction Potatoes Raman spectroscopy SERS Substrates Surface structure Thin films Tobacco Viruses |
title | Non-labeled selective virus detection with novel SERS-active porous silver nanofilms fabricated by Electron Beam Physical Vapor Deposition |
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