Unique 16S rRNA Genes of Piezophiles Reflect both Phylogeny and Adaptation

In the ocean's most extreme depths, pressures of 70 to 110 megapascals prevent the growth of all but the most hyperpiezophilic (pressure-loving) organisms. The physiological adaptations required for growth under these conditions are considered to be substantial. Efforts to determine specific ad...

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Veröffentlicht in:Applied and Environmental Microbiology 2007-02, Vol.73 (3), p.838-845
Hauptverfasser: Lauro, Federico M, Chastain, Roger A, Blankenship, Lesley E, Yayanos, A. Aristides, Bartlett, Douglas H
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container_title Applied and Environmental Microbiology
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creator Lauro, Federico M
Chastain, Roger A
Blankenship, Lesley E
Yayanos, A. Aristides
Bartlett, Douglas H
description In the ocean's most extreme depths, pressures of 70 to 110 megapascals prevent the growth of all but the most hyperpiezophilic (pressure-loving) organisms. The physiological adaptations required for growth under these conditions are considered to be substantial. Efforts to determine specific adaptations permitting growth at extreme pressures have thus far focused on relatively few γ-proteobacteria, in part due to the technical difficulties of obtaining piezophilic bacteria in pure culture. Here, we present the molecular phylogenies of several new piezophiles of widely differing geographic origins. Included are results from an analysis of the first deep-trench bacterial isolates recovered from the southern hemisphere (9.9-km depth) and of the first gram-positive piezophilic strains. These new data allowed both phylogenetic and structural 16S rRNA comparisons among deep-ocean trench piezophiles and closely related strains not adapted to high pressure. Our results suggest that (i) the Circumpolar Deep Water acts as repository for hyperpiezophiles and drives their dissemination to deep trenches in the Pacific Ocean and (ii) the occurrence of elongated helices in the 16S rRNA genes increases with the extent of adaptation to growth at elevated pressure. These helix changes are believed to improve ribosome function under deep-sea conditions.
doi_str_mv 10.1128/AEM.01726-06
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subjects Adaptation, Physiological
Bacterial proteins
Base Sequence
Biological and medical sciences
Cell culture
Cold Temperature
Evolutionary and Genomic Microbiology
Fundamental and applied biological sciences. Psychology
Gammaproteobacteria - classification
Gammaproteobacteria - genetics
Gammaproteobacteria - isolation & purification
Genes
Genes, rRNA - genetics
Gram-Positive Bacteria - classification
Gram-Positive Bacteria - genetics
Gram-Positive Bacteria - isolation & purification
Hydrostatic Pressure
Microbiology
Molecular biology
Molecular Sequence Data
Oceans
Phylogeny
Ribonucleic acid
RNA
RNA, Ribosomal, 16S - genetics
Seawater - microbiology
Sequence Analysis, DNA
title Unique 16S rRNA Genes of Piezophiles Reflect both Phylogeny and Adaptation
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