Prevalence and Genetic Diversity of Bartonella Species Isolated from Wild Rodents in Japan
Here, we describe for the first time the prevalence and genetic properties of Bartonella organisms in wild rodents in Japan. We captured 685 wild rodents throughout Japan (in 12 prefectures) and successfully isolated Bartonella organisms from 176 of the 685 rodents (isolation rate, 25.7%). Those Bar...
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| Veröffentlicht in: | Applied and Environmental Microbiology 2008-08, Vol.74 (16), p.5086-5092 |
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| creator | Inoue, Kai Maruyama, Soichi Kabeya, Hidenori Yamada, Naoyuki Ohashi, Norio Sato, Yukita Yukawa, Masayoshi Masuzawa, Toshiyuki Kawamori, Fumihiko Kadosaka, Teruki Takada, Nobuhiro Fujita, Hiromi Kawabata, Hiroki |
| description | Here, we describe for the first time the prevalence and genetic properties of Bartonella organisms in wild rodents in Japan. We captured 685 wild rodents throughout Japan (in 12 prefectures) and successfully isolated Bartonella organisms from 176 of the 685 rodents (isolation rate, 25.7%). Those Bartonella isolates were all obtained from the rodents captured in suburban areas (rate, 51.8%), but no organism was isolated from the animals captured in city areas. Sequence analysis of rpoB and gltA revealed that the Bartonella isolates obtained were classified into eight genetic groups, comprising isolates closely related to B. grahamii (A-I group), B. tribocorum and B. elizabethae (B-J group), B. tribocorum and B. rattimassiliensis (C-K group), B. rattimassiliensis (D-L group), B. phoceensis (F-N group), B. taylorii (G-O group), and probably two additional novel Bartonella species groups (E-M and H-P). B. grahamii, which is one of the potential causative agents of human neuroretinitis, was found to be predominant in Japanese rodents. In terms of the relationships between these Bartonella genetic groups and their rodent species, (i) the A-I, E-M, and H-P groups appear to be associated with Apodemus speciosus and Apodemus argenteus; (ii) the C-K, D-L, and F-N groups are likely implicated in Rattus rattus; (iii) the B-J group seems to be involved in Apodemus mice and R. rattus; and (iv) the G-O group is probably associated with A. speciosus and Clethrionomys voles. Furthermore, dual infections with two different genetic groups of bartonellae were found in A. speciosus and R. rattus. These findings suggest that the rodent in Japan might serve as a reservoir of zoonotic Bartonella infection. |
| doi_str_mv | 10.1128/AEM.00071-08 |
| format | Article |
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We captured 685 wild rodents throughout Japan (in 12 prefectures) and successfully isolated Bartonella organisms from 176 of the 685 rodents (isolation rate, 25.7%). Those Bartonella isolates were all obtained from the rodents captured in suburban areas (rate, 51.8%), but no organism was isolated from the animals captured in city areas. Sequence analysis of rpoB and gltA revealed that the Bartonella isolates obtained were classified into eight genetic groups, comprising isolates closely related to B. grahamii (A-I group), B. tribocorum and B. elizabethae (B-J group), B. tribocorum and B. rattimassiliensis (C-K group), B. rattimassiliensis (D-L group), B. phoceensis (F-N group), B. taylorii (G-O group), and probably two additional novel Bartonella species groups (E-M and H-P). B. grahamii, which is one of the potential causative agents of human neuroretinitis, was found to be predominant in Japanese rodents. In terms of the relationships between these Bartonella genetic groups and their rodent species, (i) the A-I, E-M, and H-P groups appear to be associated with Apodemus speciosus and Apodemus argenteus; (ii) the C-K, D-L, and F-N groups are likely implicated in Rattus rattus; (iii) the B-J group seems to be involved in Apodemus mice and R. rattus; and (iv) the G-O group is probably associated with A. speciosus and Clethrionomys voles. Furthermore, dual infections with two different genetic groups of bartonellae were found in A. speciosus and R. rattus. These findings suggest that the rodent in Japan might serve as a reservoir of zoonotic Bartonella infection.</description><identifier>ISSN: 0099-2240</identifier><identifier>EISSN: 1098-5336</identifier><identifier>EISSN: 1098-6596</identifier><identifier>DOI: 10.1128/AEM.00071-08</identifier><identifier>PMID: 18606803</identifier><identifier>CODEN: AEMIDF</identifier><language>eng</language><publisher>Washington, DC: American Society for Microbiology</publisher><subject>Animals ; Apodemus ; Arvicolinae - microbiology ; Bacteria ; Bacterial Typing Techniques ; Bacteriology ; Bartonella - classification ; Bartonella - genetics ; Bartonella - isolation & purification ; Bartonella Infections - epidemiology ; Bartonella Infections - microbiology ; Bartonella Infections - veterinary ; Biological and medical sciences ; Disease Reservoirs - microbiology ; DNA, Bacterial - genetics ; Fundamental and applied biological sciences. Psychology ; Genetic diversity ; Genetic Variation ; Genetics ; Japan - epidemiology ; Mice ; Microbiology ; Phylogeny ; Polymerase Chain Reaction ; Polymorphism, Restriction Fragment Length ; Public Health Microbiology ; Rats ; Rodent Diseases - epidemiology ; Rodent Diseases - microbiology ; Rodents ; Sequence Analysis, DNA ; Suburban areas</subject><ispartof>Applied and Environmental Microbiology, 2008-08, Vol.74 (16), p.5086-5092</ispartof><rights>2008 INIST-CNRS</rights><rights>Copyright American Society for Microbiology Aug 2008</rights><rights>Copyright © 2008, American Society for Microbiology</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c521t-dd8edbab349abeaa298877bf4d4208ae6dc1a4638446b3182e41ec1de46ac04d3</citedby><cites>FETCH-LOGICAL-c521t-dd8edbab349abeaa298877bf4d4208ae6dc1a4638446b3182e41ec1de46ac04d3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC2519277/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC2519277/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,314,723,776,780,881,3175,3176,27901,27902,53766,53768</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=20582289$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/18606803$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Inoue, Kai</creatorcontrib><creatorcontrib>Maruyama, Soichi</creatorcontrib><creatorcontrib>Kabeya, Hidenori</creatorcontrib><creatorcontrib>Yamada, Naoyuki</creatorcontrib><creatorcontrib>Ohashi, Norio</creatorcontrib><creatorcontrib>Sato, Yukita</creatorcontrib><creatorcontrib>Yukawa, Masayoshi</creatorcontrib><creatorcontrib>Masuzawa, Toshiyuki</creatorcontrib><creatorcontrib>Kawamori, Fumihiko</creatorcontrib><creatorcontrib>Kadosaka, Teruki</creatorcontrib><creatorcontrib>Takada, Nobuhiro</creatorcontrib><creatorcontrib>Fujita, Hiromi</creatorcontrib><creatorcontrib>Kawabata, Hiroki</creatorcontrib><title>Prevalence and Genetic Diversity of Bartonella Species Isolated from Wild Rodents in Japan</title><title>Applied and Environmental Microbiology</title><addtitle>Appl Environ Microbiol</addtitle><description>Here, we describe for the first time the prevalence and genetic properties of Bartonella organisms in wild rodents in Japan. We captured 685 wild rodents throughout Japan (in 12 prefectures) and successfully isolated Bartonella organisms from 176 of the 685 rodents (isolation rate, 25.7%). Those Bartonella isolates were all obtained from the rodents captured in suburban areas (rate, 51.8%), but no organism was isolated from the animals captured in city areas. Sequence analysis of rpoB and gltA revealed that the Bartonella isolates obtained were classified into eight genetic groups, comprising isolates closely related to B. grahamii (A-I group), B. tribocorum and B. elizabethae (B-J group), B. tribocorum and B. rattimassiliensis (C-K group), B. rattimassiliensis (D-L group), B. phoceensis (F-N group), B. taylorii (G-O group), and probably two additional novel Bartonella species groups (E-M and H-P). B. grahamii, which is one of the potential causative agents of human neuroretinitis, was found to be predominant in Japanese rodents. In terms of the relationships between these Bartonella genetic groups and their rodent species, (i) the A-I, E-M, and H-P groups appear to be associated with Apodemus speciosus and Apodemus argenteus; (ii) the C-K, D-L, and F-N groups are likely implicated in Rattus rattus; (iii) the B-J group seems to be involved in Apodemus mice and R. rattus; and (iv) the G-O group is probably associated with A. speciosus and Clethrionomys voles. Furthermore, dual infections with two different genetic groups of bartonellae were found in A. speciosus and R. rattus. These findings suggest that the rodent in Japan might serve as a reservoir of zoonotic Bartonella infection.</description><subject>Animals</subject><subject>Apodemus</subject><subject>Arvicolinae - microbiology</subject><subject>Bacteria</subject><subject>Bacterial Typing Techniques</subject><subject>Bacteriology</subject><subject>Bartonella - classification</subject><subject>Bartonella - genetics</subject><subject>Bartonella - isolation & purification</subject><subject>Bartonella Infections - epidemiology</subject><subject>Bartonella Infections - microbiology</subject><subject>Bartonella Infections - veterinary</subject><subject>Biological and medical sciences</subject><subject>Disease Reservoirs - microbiology</subject><subject>DNA, Bacterial - genetics</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Genetic diversity</subject><subject>Genetic Variation</subject><subject>Genetics</subject><subject>Japan - epidemiology</subject><subject>Mice</subject><subject>Microbiology</subject><subject>Phylogeny</subject><subject>Polymerase Chain Reaction</subject><subject>Polymorphism, Restriction Fragment Length</subject><subject>Public Health Microbiology</subject><subject>Rats</subject><subject>Rodent Diseases - epidemiology</subject><subject>Rodent Diseases - microbiology</subject><subject>Rodents</subject><subject>Sequence Analysis, DNA</subject><subject>Suburban areas</subject><issn>0099-2240</issn><issn>1098-5336</issn><issn>1098-6596</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2008</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkkFv1DAQhSMEotvCjTNYSOVEiu04iX1BKqWUoiIQpULiYk3sya6rxF7s7KL-e7zsqgUunGzJn957M89F8YTRI8a4fHV8-vGIUtqyksp7xYxRJcu6qpr7xYxSpUrOBd0r9lO6zpSgjXxY7DHZ5AutZsX3zxHXMKA3SMBbcoYeJ2fIW7fGmNx0Q0JP3kCcgsdhAHK5ROMwkfMUBpjQkj6GkXxzgyVfgkU_JeI8-QBL8I-KBz0MCR_vzoPi6t3p15P35cWns_OT44vS1JxNpbUSbQddJRR0CMCVlG3b9cIKTiVgYw0D0VRSiKarmOQoGBpmUTRgqLDVQfF6q7tcdSNak0NEGPQyuhHijQ7g9N8v3i30PKw1r5nibZsFXuwEYvixwjTp0SWzGddjWCXdKJFtKfsvyJlQlDZVBp__A16HVfR5C5rTWrWCyo3tyy1kYkgpYn8bmVG9qVbnavXvajWVGX_655h38K7LDBzuAEgGhj6CNy7dctlYci7VXbiFmy9-uoga0qgBR90KzRpdU9lk6NkW6iFomMcsdHW52UH-U7yWile_AJSDwIc</recordid><startdate>20080801</startdate><enddate>20080801</enddate><creator>Inoue, Kai</creator><creator>Maruyama, Soichi</creator><creator>Kabeya, Hidenori</creator><creator>Yamada, Naoyuki</creator><creator>Ohashi, Norio</creator><creator>Sato, Yukita</creator><creator>Yukawa, Masayoshi</creator><creator>Masuzawa, Toshiyuki</creator><creator>Kawamori, Fumihiko</creator><creator>Kadosaka, Teruki</creator><creator>Takada, Nobuhiro</creator><creator>Fujita, Hiromi</creator><creator>Kawabata, Hiroki</creator><general>American Society for Microbiology</general><general>American Society for Microbiology (ASM)</general><scope>FBQ</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>7QO</scope><scope>7SN</scope><scope>7SS</scope><scope>7ST</scope><scope>7T7</scope><scope>7TM</scope><scope>7U9</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>H94</scope><scope>M7N</scope><scope>P64</scope><scope>RC3</scope><scope>SOI</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20080801</creationdate><title>Prevalence and Genetic Diversity of Bartonella Species Isolated from Wild Rodents in Japan</title><author>Inoue, Kai ; Maruyama, Soichi ; Kabeya, Hidenori ; Yamada, Naoyuki ; Ohashi, Norio ; Sato, Yukita ; Yukawa, Masayoshi ; Masuzawa, Toshiyuki ; Kawamori, Fumihiko ; Kadosaka, Teruki ; Takada, Nobuhiro ; Fujita, Hiromi ; Kawabata, Hiroki</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c521t-dd8edbab349abeaa298877bf4d4208ae6dc1a4638446b3182e41ec1de46ac04d3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2008</creationdate><topic>Animals</topic><topic>Apodemus</topic><topic>Arvicolinae - microbiology</topic><topic>Bacteria</topic><topic>Bacterial Typing Techniques</topic><topic>Bacteriology</topic><topic>Bartonella - classification</topic><topic>Bartonella - genetics</topic><topic>Bartonella - isolation & purification</topic><topic>Bartonella Infections - epidemiology</topic><topic>Bartonella Infections - microbiology</topic><topic>Bartonella Infections - veterinary</topic><topic>Biological and medical sciences</topic><topic>Disease Reservoirs - microbiology</topic><topic>DNA, Bacterial - genetics</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Genetic diversity</topic><topic>Genetic Variation</topic><topic>Genetics</topic><topic>Japan - epidemiology</topic><topic>Mice</topic><topic>Microbiology</topic><topic>Phylogeny</topic><topic>Polymerase Chain Reaction</topic><topic>Polymorphism, Restriction Fragment Length</topic><topic>Public Health Microbiology</topic><topic>Rats</topic><topic>Rodent Diseases - epidemiology</topic><topic>Rodent Diseases - microbiology</topic><topic>Rodents</topic><topic>Sequence Analysis, DNA</topic><topic>Suburban areas</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Inoue, Kai</creatorcontrib><creatorcontrib>Maruyama, Soichi</creatorcontrib><creatorcontrib>Kabeya, Hidenori</creatorcontrib><creatorcontrib>Yamada, Naoyuki</creatorcontrib><creatorcontrib>Ohashi, Norio</creatorcontrib><creatorcontrib>Sato, Yukita</creatorcontrib><creatorcontrib>Yukawa, Masayoshi</creatorcontrib><creatorcontrib>Masuzawa, Toshiyuki</creatorcontrib><creatorcontrib>Kawamori, Fumihiko</creatorcontrib><creatorcontrib>Kadosaka, Teruki</creatorcontrib><creatorcontrib>Takada, Nobuhiro</creatorcontrib><creatorcontrib>Fujita, Hiromi</creatorcontrib><creatorcontrib>Kawabata, Hiroki</creatorcontrib><collection>AGRIS</collection><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Biotechnology Research Abstracts</collection><collection>Ecology Abstracts</collection><collection>Entomology Abstracts (Full archive)</collection><collection>Environment Abstracts</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Nucleic Acids Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>Environment Abstracts</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Applied and Environmental Microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Inoue, Kai</au><au>Maruyama, Soichi</au><au>Kabeya, Hidenori</au><au>Yamada, Naoyuki</au><au>Ohashi, Norio</au><au>Sato, Yukita</au><au>Yukawa, Masayoshi</au><au>Masuzawa, Toshiyuki</au><au>Kawamori, Fumihiko</au><au>Kadosaka, Teruki</au><au>Takada, Nobuhiro</au><au>Fujita, Hiromi</au><au>Kawabata, Hiroki</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Prevalence and Genetic Diversity of Bartonella Species Isolated from Wild Rodents in Japan</atitle><jtitle>Applied and Environmental Microbiology</jtitle><addtitle>Appl Environ Microbiol</addtitle><date>2008-08-01</date><risdate>2008</risdate><volume>74</volume><issue>16</issue><spage>5086</spage><epage>5092</epage><pages>5086-5092</pages><issn>0099-2240</issn><eissn>1098-5336</eissn><eissn>1098-6596</eissn><coden>AEMIDF</coden><abstract>Here, we describe for the first time the prevalence and genetic properties of Bartonella organisms in wild rodents in Japan. We captured 685 wild rodents throughout Japan (in 12 prefectures) and successfully isolated Bartonella organisms from 176 of the 685 rodents (isolation rate, 25.7%). Those Bartonella isolates were all obtained from the rodents captured in suburban areas (rate, 51.8%), but no organism was isolated from the animals captured in city areas. Sequence analysis of rpoB and gltA revealed that the Bartonella isolates obtained were classified into eight genetic groups, comprising isolates closely related to B. grahamii (A-I group), B. tribocorum and B. elizabethae (B-J group), B. tribocorum and B. rattimassiliensis (C-K group), B. rattimassiliensis (D-L group), B. phoceensis (F-N group), B. taylorii (G-O group), and probably two additional novel Bartonella species groups (E-M and H-P). B. grahamii, which is one of the potential causative agents of human neuroretinitis, was found to be predominant in Japanese rodents. In terms of the relationships between these Bartonella genetic groups and their rodent species, (i) the A-I, E-M, and H-P groups appear to be associated with Apodemus speciosus and Apodemus argenteus; (ii) the C-K, D-L, and F-N groups are likely implicated in Rattus rattus; (iii) the B-J group seems to be involved in Apodemus mice and R. rattus; and (iv) the G-O group is probably associated with A. speciosus and Clethrionomys voles. Furthermore, dual infections with two different genetic groups of bartonellae were found in A. speciosus and R. rattus. These findings suggest that the rodent in Japan might serve as a reservoir of zoonotic Bartonella infection.</abstract><cop>Washington, DC</cop><pub>American Society for Microbiology</pub><pmid>18606803</pmid><doi>10.1128/AEM.00071-08</doi><tpages>7</tpages><oa>free_for_read</oa></addata></record> |
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| source | American Society for Microbiology; MEDLINE; Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals; PubMed Central; Alma/SFX Local Collection |
| subjects | Animals Apodemus Arvicolinae - microbiology Bacteria Bacterial Typing Techniques Bacteriology Bartonella - classification Bartonella - genetics Bartonella - isolation & purification Bartonella Infections - epidemiology Bartonella Infections - microbiology Bartonella Infections - veterinary Biological and medical sciences Disease Reservoirs - microbiology DNA, Bacterial - genetics Fundamental and applied biological sciences. Psychology Genetic diversity Genetic Variation Genetics Japan - epidemiology Mice Microbiology Phylogeny Polymerase Chain Reaction Polymorphism, Restriction Fragment Length Public Health Microbiology Rats Rodent Diseases - epidemiology Rodent Diseases - microbiology Rodents Sequence Analysis, DNA Suburban areas |
| title | Prevalence and Genetic Diversity of Bartonella Species Isolated from Wild Rodents in Japan |
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