Ribosomal Heterogeneity of Maize Tissues: Insights of Biological Relevance
In recent years, the selective role of ribosomes in the translational process of eukaryotes has been suggested. Evidence indicates that ribosomal heterogeneity at the level of protein stoichiometry and phosphorylation status differs among organisms, suggesting ribosomal specialization according to t...
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Veröffentlicht in: | Plant molecular biology reporter 2018-06, Vol.36 (3), p.491-499 |
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description | In recent years, the selective role of ribosomes in the translational process of eukaryotes has been suggested. Evidence indicates that ribosomal heterogeneity at the level of protein stoichiometry and phosphorylation status differs among organisms, suggesting ribosomal specialization according to the state of development and the surrounding environment. During germination, protein synthesis is an active process that begins with the translation of the mRNAs stored in quiescent seeds and continues with the newly synthesized mRNAs. In this study, we identified differences in the abundance of ribosomal proteins (RPs) in maize embryos at different developmental stages. The relative quantification of RPs during germination revealed changes in six small subunit proteins, S3 (uS3), S5 (uS7), S7 (eS7), two isoforms of S17 (eS17), and S18 (uS13), and nine large subunit proteins, L1 (uL1), L5 (uL18), two isoforms of P0 (uL10), L11 (uL5), L14 (eL14), L15 (eL15), L19 (eL19), and L27 (eL27). Further analysis of ribosomal protein phosphorylation during germination revealed that the phosphorylation of PRP0 (uL10) and P1 increased and that of PRS3 (uS3) decreased in germinated versus quiescent embryos. The addition of insulin during germination increased the phosphorylation of the P1 protein, suggesting that its phosphorylation is controlled by the TOR pathway. Our results indicate that a heterogeneous ribosomal population provides to maize ribosomes during germination a different ability to translate mRNAs, suggesting another level of regulation by the ribosomes. |
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Evidence indicates that ribosomal heterogeneity at the level of protein stoichiometry and phosphorylation status differs among organisms, suggesting ribosomal specialization according to the state of development and the surrounding environment. During germination, protein synthesis is an active process that begins with the translation of the mRNAs stored in quiescent seeds and continues with the newly synthesized mRNAs. In this study, we identified differences in the abundance of ribosomal proteins (RPs) in maize embryos at different developmental stages. The relative quantification of RPs during germination revealed changes in six small subunit proteins, S3 (uS3), S5 (uS7), S7 (eS7), two isoforms of S17 (eS17), and S18 (uS13), and nine large subunit proteins, L1 (uL1), L5 (uL18), two isoforms of P0 (uL10), L11 (uL5), L14 (eL14), L15 (eL15), L19 (eL19), and L27 (eL27). Further analysis of ribosomal protein phosphorylation during germination revealed that the phosphorylation of PRP0 (uL10) and P1 increased and that of PRS3 (uS3) decreased in germinated versus quiescent embryos. The addition of insulin during germination increased the phosphorylation of the P1 protein, suggesting that its phosphorylation is controlled by the TOR pathway. Our results indicate that a heterogeneous ribosomal population provides to maize ribosomes during germination a different ability to translate mRNAs, suggesting another level of regulation by the ribosomes.</description><identifier>ISSN: 0735-9640</identifier><identifier>EISSN: 1572-9818</identifier><identifier>DOI: 10.1007/s11105-018-1080-4</identifier><language>eng</language><publisher>New York: Springer US</publisher><subject>Bioinformatics ; Biomedical and Life Sciences ; Corn ; Developmental stages ; Embryos ; Eukaryotes ; Germination ; Heterogeneity ; Insulin ; Isoforms ; Kinases ; Life Sciences ; Metabolomics ; Original Paper ; p1 Protein ; Phosphorylation ; Plant Breeding/Biotechnology ; Plant Sciences ; Protein biosynthesis ; Protein synthesis ; Proteins ; Proteomics ; Ribosomal proteins ; Ribosomes ; Seeds ; Specialization ; Stoichiometry</subject><ispartof>Plant molecular biology reporter, 2018-06, Vol.36 (3), p.491-499</ispartof><rights>Springer Science+Business Media, LLC, part of Springer Nature 2018</rights><rights>Plant Molecular Biology Reporter is a copyright of Springer, (2018). All Rights Reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c316t-e2bd63b51b60eda9b41d3a4924f3104b178359298a5309e2efdf76367d262e23</citedby><cites>FETCH-LOGICAL-c316t-e2bd63b51b60eda9b41d3a4924f3104b178359298a5309e2efdf76367d262e23</cites><orcidid>0000-0003-1949-1914</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s11105-018-1080-4$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s11105-018-1080-4$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,776,780,27901,27902,41464,42533,51294</link.rule.ids></links><search><creatorcontrib>Hernández-Hermenegildo, Ricardo A</creatorcontrib><creatorcontrib>Bernal, Lilia</creatorcontrib><creatorcontrib>Jiménez-Pérez, Laura V</creatorcontrib><creatorcontrib>Bernal-Lugo, Irma</creatorcontrib><creatorcontrib>de Jiménez, Estela Sánchez</creatorcontrib><title>Ribosomal Heterogeneity of Maize Tissues: Insights of Biological Relevance</title><title>Plant molecular biology reporter</title><addtitle>Plant Mol Biol Rep</addtitle><description>In recent years, the selective role of ribosomes in the translational process of eukaryotes has been suggested. Evidence indicates that ribosomal heterogeneity at the level of protein stoichiometry and phosphorylation status differs among organisms, suggesting ribosomal specialization according to the state of development and the surrounding environment. During germination, protein synthesis is an active process that begins with the translation of the mRNAs stored in quiescent seeds and continues with the newly synthesized mRNAs. In this study, we identified differences in the abundance of ribosomal proteins (RPs) in maize embryos at different developmental stages. The relative quantification of RPs during germination revealed changes in six small subunit proteins, S3 (uS3), S5 (uS7), S7 (eS7), two isoforms of S17 (eS17), and S18 (uS13), and nine large subunit proteins, L1 (uL1), L5 (uL18), two isoforms of P0 (uL10), L11 (uL5), L14 (eL14), L15 (eL15), L19 (eL19), and L27 (eL27). Further analysis of ribosomal protein phosphorylation during germination revealed that the phosphorylation of PRP0 (uL10) and P1 increased and that of PRS3 (uS3) decreased in germinated versus quiescent embryos. The addition of insulin during germination increased the phosphorylation of the P1 protein, suggesting that its phosphorylation is controlled by the TOR pathway. Our results indicate that a heterogeneous ribosomal population provides to maize ribosomes during germination a different ability to translate mRNAs, suggesting another level of regulation by the ribosomes.</description><subject>Bioinformatics</subject><subject>Biomedical and Life Sciences</subject><subject>Corn</subject><subject>Developmental stages</subject><subject>Embryos</subject><subject>Eukaryotes</subject><subject>Germination</subject><subject>Heterogeneity</subject><subject>Insulin</subject><subject>Isoforms</subject><subject>Kinases</subject><subject>Life Sciences</subject><subject>Metabolomics</subject><subject>Original Paper</subject><subject>p1 Protein</subject><subject>Phosphorylation</subject><subject>Plant Breeding/Biotechnology</subject><subject>Plant Sciences</subject><subject>Protein biosynthesis</subject><subject>Protein synthesis</subject><subject>Proteins</subject><subject>Proteomics</subject><subject>Ribosomal proteins</subject><subject>Ribosomes</subject><subject>Seeds</subject><subject>Specialization</subject><subject>Stoichiometry</subject><issn>0735-9640</issn><issn>1572-9818</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2018</creationdate><recordtype>article</recordtype><sourceid>BENPR</sourceid><recordid>eNp1kE1Lw0AQhhdRsFZ_gLeA59WZ3Wyy602L2kpFKL0v-ZjElDRbd1Oh_npTInjyNId5n3eGh7FrhFsESO8CIoLigJojaODxCZugSgU3GvUpm0AqFTdJDOfsIoQNDAxoPWGvqyZ3wW2zNppTT97V1FHTHyJXRW9Z803RuglhT-E-WnShqT_6cFw9Nq51dVMM2Ipa-sq6gi7ZWZW1ga5-55Stn5_Wszlfvr8sZg9LXkhMek4iLxOZK8wToDIzeYylzGIj4koixDmmWiojjM6UBEOCqrJKE5mkpUgECTllN2PtzrvP4bHebtzed8NFK0AlBrRQakjhmCq8C8FTZXe-2Wb-YBHs0ZgdjdnBmD0as_HAiJEJQ7aryf81_w_9AOb4bRA</recordid><startdate>20180601</startdate><enddate>20180601</enddate><creator>Hernández-Hermenegildo, Ricardo A</creator><creator>Bernal, Lilia</creator><creator>Jiménez-Pérez, Laura V</creator><creator>Bernal-Lugo, Irma</creator><creator>de Jiménez, Estela Sánchez</creator><general>Springer US</general><general>Springer Nature B.V</general><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7QL</scope><scope>7QR</scope><scope>7T7</scope><scope>7TM</scope><scope>7U9</scope><scope>7X2</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FK</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>LK8</scope><scope>M0K</scope><scope>M7N</scope><scope>M7P</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>RC3</scope><orcidid>https://orcid.org/0000-0003-1949-1914</orcidid></search><sort><creationdate>20180601</creationdate><title>Ribosomal Heterogeneity of Maize Tissues: Insights of Biological Relevance</title><author>Hernández-Hermenegildo, Ricardo A ; Bernal, Lilia ; Jiménez-Pérez, Laura V ; Bernal-Lugo, Irma ; de Jiménez, Estela Sánchez</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c316t-e2bd63b51b60eda9b41d3a4924f3104b178359298a5309e2efdf76367d262e23</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2018</creationdate><topic>Bioinformatics</topic><topic>Biomedical and Life Sciences</topic><topic>Corn</topic><topic>Developmental stages</topic><topic>Embryos</topic><topic>Eukaryotes</topic><topic>Germination</topic><topic>Heterogeneity</topic><topic>Insulin</topic><topic>Isoforms</topic><topic>Kinases</topic><topic>Life Sciences</topic><topic>Metabolomics</topic><topic>Original Paper</topic><topic>p1 Protein</topic><topic>Phosphorylation</topic><topic>Plant Breeding/Biotechnology</topic><topic>Plant Sciences</topic><topic>Protein biosynthesis</topic><topic>Protein synthesis</topic><topic>Proteins</topic><topic>Proteomics</topic><topic>Ribosomal proteins</topic><topic>Ribosomes</topic><topic>Seeds</topic><topic>Specialization</topic><topic>Stoichiometry</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Hernández-Hermenegildo, Ricardo A</creatorcontrib><creatorcontrib>Bernal, Lilia</creatorcontrib><creatorcontrib>Jiménez-Pérez, Laura V</creatorcontrib><creatorcontrib>Bernal-Lugo, Irma</creatorcontrib><creatorcontrib>de Jiménez, Estela Sánchez</creatorcontrib><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Chemoreception Abstracts</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Nucleic Acids Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Agricultural Science Collection</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest One Sustainability</collection><collection>ProQuest Central UK/Ireland</collection><collection>Agricultural & Environmental Science Collection</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>ProQuest Central Student</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Biological Science Collection</collection><collection>Agricultural Science Database</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biological Science Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>Genetics Abstracts</collection><jtitle>Plant molecular biology reporter</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Hernández-Hermenegildo, Ricardo A</au><au>Bernal, Lilia</au><au>Jiménez-Pérez, Laura V</au><au>Bernal-Lugo, Irma</au><au>de Jiménez, Estela Sánchez</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Ribosomal Heterogeneity of Maize Tissues: Insights of Biological Relevance</atitle><jtitle>Plant molecular biology reporter</jtitle><stitle>Plant Mol Biol Rep</stitle><date>2018-06-01</date><risdate>2018</risdate><volume>36</volume><issue>3</issue><spage>491</spage><epage>499</epage><pages>491-499</pages><issn>0735-9640</issn><eissn>1572-9818</eissn><abstract>In recent years, the selective role of ribosomes in the translational process of eukaryotes has been suggested. Evidence indicates that ribosomal heterogeneity at the level of protein stoichiometry and phosphorylation status differs among organisms, suggesting ribosomal specialization according to the state of development and the surrounding environment. During germination, protein synthesis is an active process that begins with the translation of the mRNAs stored in quiescent seeds and continues with the newly synthesized mRNAs. In this study, we identified differences in the abundance of ribosomal proteins (RPs) in maize embryos at different developmental stages. The relative quantification of RPs during germination revealed changes in six small subunit proteins, S3 (uS3), S5 (uS7), S7 (eS7), two isoforms of S17 (eS17), and S18 (uS13), and nine large subunit proteins, L1 (uL1), L5 (uL18), two isoforms of P0 (uL10), L11 (uL5), L14 (eL14), L15 (eL15), L19 (eL19), and L27 (eL27). Further analysis of ribosomal protein phosphorylation during germination revealed that the phosphorylation of PRP0 (uL10) and P1 increased and that of PRS3 (uS3) decreased in germinated versus quiescent embryos. The addition of insulin during germination increased the phosphorylation of the P1 protein, suggesting that its phosphorylation is controlled by the TOR pathway. Our results indicate that a heterogeneous ribosomal population provides to maize ribosomes during germination a different ability to translate mRNAs, suggesting another level of regulation by the ribosomes.</abstract><cop>New York</cop><pub>Springer US</pub><doi>10.1007/s11105-018-1080-4</doi><tpages>9</tpages><orcidid>https://orcid.org/0000-0003-1949-1914</orcidid></addata></record> |
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subjects | Bioinformatics Biomedical and Life Sciences Corn Developmental stages Embryos Eukaryotes Germination Heterogeneity Insulin Isoforms Kinases Life Sciences Metabolomics Original Paper p1 Protein Phosphorylation Plant Breeding/Biotechnology Plant Sciences Protein biosynthesis Protein synthesis Proteins Proteomics Ribosomal proteins Ribosomes Seeds Specialization Stoichiometry |
title | Ribosomal Heterogeneity of Maize Tissues: Insights of Biological Relevance |
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