Description of an orthologous cluster of ochratoxin A biosynthetic genes in Aspergillus and Penicillium species. A comparative analysis

Ochratoxin A (OTA) is one of the most important mycotoxins due to its toxic properties and worldwide distribution which is produced by several Aspergillus and Penicillium species. The knowledge of OTA biosynthetic genes and understanding of the mechanisms involved in their regulation are essential....

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:International journal of food microbiology 2018-03, Vol.268, p.35-43
Hauptverfasser: Gil-Serna, Jessica, García-Díaz, Marta, González-Jaén, María Teresa, Vázquez, Covadonga, Patiño, Belén
Format: Artikel
Sprache:eng
Schlagworte:
Online-Zugang:Volltext
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
container_end_page 43
container_issue
container_start_page 35
container_title International journal of food microbiology
container_volume 268
creator Gil-Serna, Jessica
García-Díaz, Marta
González-Jaén, María Teresa
Vázquez, Covadonga
Patiño, Belén
description Ochratoxin A (OTA) is one of the most important mycotoxins due to its toxic properties and worldwide distribution which is produced by several Aspergillus and Penicillium species. The knowledge of OTA biosynthetic genes and understanding of the mechanisms involved in their regulation are essential. In this work, we obtained a clear picture of biosynthetic genes organization in the main OTA-producing Aspergillus and Penicillium species (A. steynii, A. westerdijkiae, A. niger, A. carbonarius and P. nordicum) using complete genome sequences obtained in this work or previously available on databases. The results revealed a region containing five ORFs which predicted five proteins: halogenase, bZIP transcription factor, cytochrome P450 monooxygenase, non-ribosomal peptide synthetase and polyketide synthase in all the five species. Genetic synteny was conserved in both Penicillium and Aspergillus species although genomic location seemed to be different since the clusters presented different flanking regions (except for A. steynii and A. westerdijkiae); these observations support the hypothesis of the orthology of this genomic region and that it might have been acquired by horizontal transfer. New real-time RT-PCR assays for quantification of the expression of these OTA biosynthetic genes were developed. In all species, the five genes were consistently expressed in OTA-producing strains in permissive conditions. These protocols might favour futures studies on the regulation of biosynthetic genes in order to develop new efficient control methods to avoid OTA entering the food chain. •A genomic region containing five ORFs was described in five OTA-producing species.•Its genetic synteny is conserved in Aspergillus and Penicillium species.•It is the first time that a similar cluster is described in Penicillium.•New specific real-time RT-PCR assays were designed to evaluate gene expression.•The five genes are only expressed in OTA producing strains.
doi_str_mv 10.1016/j.ijfoodmicro.2017.12.028
format Article
fullrecord <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_journals_2045354063</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><els_id>S0168160517305573</els_id><sourcerecordid>2045354063</sourcerecordid><originalsourceid>FETCH-LOGICAL-c508t-a99f7a58dd3e39bc0557a15f8407483bae4b438f788168f1a8310003dc36c0fd3</originalsourceid><addsrcrecordid>eNqNUcuO1DAQtBCInV34BWTEOcGO48Q5roblIa0EBzhbjt2ZcZTEwXZWO1_Ab9OjWRBHLrbcXVXt6iLkLWclZ7x5P5Z-HEJws7cxlBXjbcmrklXqGdlx1XaFqBv2nOwQqwreMHlFrlMaGWNSCPaSXFWdqOpKqR359QGSjX7NPiw0DNTgGfMxTOEQtkTttKUM8dwJ9hhNDo9-obe09yGdlnyE7C09wAKJnutphXjwE5JQyNFvsHiLT7_NFFvWQyqRbMO8GtTyD4AwM52ST6_Ii8FMCV4_3Tfkx8e77_vPxf3XT1_2t_eFlUzlwnTd0BqpnBMgut4yKVvD5aBq1tZK9AbqvhZqaJVC7wM3SnC0LZwVjWWDEzfk3UV3jeHnBinrMWwRP5F0xWopZM0agajugsL9phRh0Gv0s4knzZk-R6BH_U8E-hyB5pXGCJD75mnC1s_g_jL_7BwB-wsA0OeDh6gTbmax4HwEm7UL_j_G_AZg56BV</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>2045354063</pqid></control><display><type>article</type><title>Description of an orthologous cluster of ochratoxin A biosynthetic genes in Aspergillus and Penicillium species. A comparative analysis</title><source>Elsevier ScienceDirect Journals Complete - AutoHoldings</source><source>MEDLINE</source><creator>Gil-Serna, Jessica ; García-Díaz, Marta ; González-Jaén, María Teresa ; Vázquez, Covadonga ; Patiño, Belén</creator><creatorcontrib>Gil-Serna, Jessica ; García-Díaz, Marta ; González-Jaén, María Teresa ; Vázquez, Covadonga ; Patiño, Belén</creatorcontrib><description>Ochratoxin A (OTA) is one of the most important mycotoxins due to its toxic properties and worldwide distribution which is produced by several Aspergillus and Penicillium species. The knowledge of OTA biosynthetic genes and understanding of the mechanisms involved in their regulation are essential. In this work, we obtained a clear picture of biosynthetic genes organization in the main OTA-producing Aspergillus and Penicillium species (A. steynii, A. westerdijkiae, A. niger, A. carbonarius and P. nordicum) using complete genome sequences obtained in this work or previously available on databases. The results revealed a region containing five ORFs which predicted five proteins: halogenase, bZIP transcription factor, cytochrome P450 monooxygenase, non-ribosomal peptide synthetase and polyketide synthase in all the five species. Genetic synteny was conserved in both Penicillium and Aspergillus species although genomic location seemed to be different since the clusters presented different flanking regions (except for A. steynii and A. westerdijkiae); these observations support the hypothesis of the orthology of this genomic region and that it might have been acquired by horizontal transfer. New real-time RT-PCR assays for quantification of the expression of these OTA biosynthetic genes were developed. In all species, the five genes were consistently expressed in OTA-producing strains in permissive conditions. These protocols might favour futures studies on the regulation of biosynthetic genes in order to develop new efficient control methods to avoid OTA entering the food chain. •A genomic region containing five ORFs was described in five OTA-producing species.•Its genetic synteny is conserved in Aspergillus and Penicillium species.•It is the first time that a similar cluster is described in Penicillium.•New specific real-time RT-PCR assays were designed to evaluate gene expression.•The five genes are only expressed in OTA producing strains.</description><identifier>ISSN: 0168-1605</identifier><identifier>EISSN: 1879-3460</identifier><identifier>DOI: 10.1016/j.ijfoodmicro.2017.12.028</identifier><identifier>PMID: 29324288</identifier><language>eng</language><publisher>Netherlands: Elsevier B.V</publisher><subject>Aspergillus ; Aspergillus - genetics ; Aspergillus - metabolism ; Basic-Leucine Zipper Transcription Factors - genetics ; Biosynthesis ; bZIP ; Cluster ; Cluster analysis ; Comparative analysis ; Control methods ; Cytochrome ; Cytochrome P-450 Enzyme System - genetics ; Cytochrome P450 ; Cytochrome P450 monooxygenase ; Evolutionary conservation ; Food chains ; Gene expression ; Gene regulation ; Gene sequencing ; Genes ; Genome, Fungal - genetics ; Genomes ; Halogenase ; Horizontal transfer ; Metabolites ; Multigene Family - genetics ; Mycotoxins ; Mycotoxins - genetics ; Mycotoxins - metabolism ; NRPS ; Ochratoxin A ; Ochratoxins - biosynthesis ; Orthology ; P450 ; Penicillium ; Penicillium - genetics ; Penicillium - metabolism ; Peptide Synthases - genetics ; PKS ; Polyketide synthase ; Polyketide Synthases - genetics ; Polymerase chain reaction ; Proteins ; Species ; Synteny</subject><ispartof>International journal of food microbiology, 2018-03, Vol.268, p.35-43</ispartof><rights>2018 Elsevier B.V.</rights><rights>Copyright © 2018 Elsevier B.V. All rights reserved.</rights><rights>Copyright Elsevier BV Mar 2, 2018</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c508t-a99f7a58dd3e39bc0557a15f8407483bae4b438f788168f1a8310003dc36c0fd3</citedby><cites>FETCH-LOGICAL-c508t-a99f7a58dd3e39bc0557a15f8407483bae4b438f788168f1a8310003dc36c0fd3</cites><orcidid>0000-0001-8023-1260</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://dx.doi.org/10.1016/j.ijfoodmicro.2017.12.028$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,780,784,3548,27922,27923,45993</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/29324288$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Gil-Serna, Jessica</creatorcontrib><creatorcontrib>García-Díaz, Marta</creatorcontrib><creatorcontrib>González-Jaén, María Teresa</creatorcontrib><creatorcontrib>Vázquez, Covadonga</creatorcontrib><creatorcontrib>Patiño, Belén</creatorcontrib><title>Description of an orthologous cluster of ochratoxin A biosynthetic genes in Aspergillus and Penicillium species. A comparative analysis</title><title>International journal of food microbiology</title><addtitle>Int J Food Microbiol</addtitle><description>Ochratoxin A (OTA) is one of the most important mycotoxins due to its toxic properties and worldwide distribution which is produced by several Aspergillus and Penicillium species. The knowledge of OTA biosynthetic genes and understanding of the mechanisms involved in their regulation are essential. In this work, we obtained a clear picture of biosynthetic genes organization in the main OTA-producing Aspergillus and Penicillium species (A. steynii, A. westerdijkiae, A. niger, A. carbonarius and P. nordicum) using complete genome sequences obtained in this work or previously available on databases. The results revealed a region containing five ORFs which predicted five proteins: halogenase, bZIP transcription factor, cytochrome P450 monooxygenase, non-ribosomal peptide synthetase and polyketide synthase in all the five species. Genetic synteny was conserved in both Penicillium and Aspergillus species although genomic location seemed to be different since the clusters presented different flanking regions (except for A. steynii and A. westerdijkiae); these observations support the hypothesis of the orthology of this genomic region and that it might have been acquired by horizontal transfer. New real-time RT-PCR assays for quantification of the expression of these OTA biosynthetic genes were developed. In all species, the five genes were consistently expressed in OTA-producing strains in permissive conditions. These protocols might favour futures studies on the regulation of biosynthetic genes in order to develop new efficient control methods to avoid OTA entering the food chain. •A genomic region containing five ORFs was described in five OTA-producing species.•Its genetic synteny is conserved in Aspergillus and Penicillium species.•It is the first time that a similar cluster is described in Penicillium.•New specific real-time RT-PCR assays were designed to evaluate gene expression.•The five genes are only expressed in OTA producing strains.</description><subject>Aspergillus</subject><subject>Aspergillus - genetics</subject><subject>Aspergillus - metabolism</subject><subject>Basic-Leucine Zipper Transcription Factors - genetics</subject><subject>Biosynthesis</subject><subject>bZIP</subject><subject>Cluster</subject><subject>Cluster analysis</subject><subject>Comparative analysis</subject><subject>Control methods</subject><subject>Cytochrome</subject><subject>Cytochrome P-450 Enzyme System - genetics</subject><subject>Cytochrome P450</subject><subject>Cytochrome P450 monooxygenase</subject><subject>Evolutionary conservation</subject><subject>Food chains</subject><subject>Gene expression</subject><subject>Gene regulation</subject><subject>Gene sequencing</subject><subject>Genes</subject><subject>Genome, Fungal - genetics</subject><subject>Genomes</subject><subject>Halogenase</subject><subject>Horizontal transfer</subject><subject>Metabolites</subject><subject>Multigene Family - genetics</subject><subject>Mycotoxins</subject><subject>Mycotoxins - genetics</subject><subject>Mycotoxins - metabolism</subject><subject>NRPS</subject><subject>Ochratoxin A</subject><subject>Ochratoxins - biosynthesis</subject><subject>Orthology</subject><subject>P450</subject><subject>Penicillium</subject><subject>Penicillium - genetics</subject><subject>Penicillium - metabolism</subject><subject>Peptide Synthases - genetics</subject><subject>PKS</subject><subject>Polyketide synthase</subject><subject>Polyketide Synthases - genetics</subject><subject>Polymerase chain reaction</subject><subject>Proteins</subject><subject>Species</subject><subject>Synteny</subject><issn>0168-1605</issn><issn>1879-3460</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2018</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqNUcuO1DAQtBCInV34BWTEOcGO48Q5roblIa0EBzhbjt2ZcZTEwXZWO1_Ab9OjWRBHLrbcXVXt6iLkLWclZ7x5P5Z-HEJws7cxlBXjbcmrklXqGdlx1XaFqBv2nOwQqwreMHlFrlMaGWNSCPaSXFWdqOpKqR359QGSjX7NPiw0DNTgGfMxTOEQtkTttKUM8dwJ9hhNDo9-obe09yGdlnyE7C09wAKJnutphXjwE5JQyNFvsHiLT7_NFFvWQyqRbMO8GtTyD4AwM52ST6_Ii8FMCV4_3Tfkx8e77_vPxf3XT1_2t_eFlUzlwnTd0BqpnBMgut4yKVvD5aBq1tZK9AbqvhZqaJVC7wM3SnC0LZwVjWWDEzfk3UV3jeHnBinrMWwRP5F0xWopZM0agajugsL9phRh0Gv0s4knzZk-R6BH_U8E-hyB5pXGCJD75mnC1s_g_jL_7BwB-wsA0OeDh6gTbmax4HwEm7UL_j_G_AZg56BV</recordid><startdate>20180302</startdate><enddate>20180302</enddate><creator>Gil-Serna, Jessica</creator><creator>García-Díaz, Marta</creator><creator>González-Jaén, María Teresa</creator><creator>Vázquez, Covadonga</creator><creator>Patiño, Belén</creator><general>Elsevier B.V</general><general>Elsevier BV</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>7QO</scope><scope>7QR</scope><scope>7T7</scope><scope>7U9</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>H94</scope><scope>M7N</scope><scope>P64</scope><scope>RC3</scope><orcidid>https://orcid.org/0000-0001-8023-1260</orcidid></search><sort><creationdate>20180302</creationdate><title>Description of an orthologous cluster of ochratoxin A biosynthetic genes in Aspergillus and Penicillium species. A comparative analysis</title><author>Gil-Serna, Jessica ; García-Díaz, Marta ; González-Jaén, María Teresa ; Vázquez, Covadonga ; Patiño, Belén</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c508t-a99f7a58dd3e39bc0557a15f8407483bae4b438f788168f1a8310003dc36c0fd3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2018</creationdate><topic>Aspergillus</topic><topic>Aspergillus - genetics</topic><topic>Aspergillus - metabolism</topic><topic>Basic-Leucine Zipper Transcription Factors - genetics</topic><topic>Biosynthesis</topic><topic>bZIP</topic><topic>Cluster</topic><topic>Cluster analysis</topic><topic>Comparative analysis</topic><topic>Control methods</topic><topic>Cytochrome</topic><topic>Cytochrome P-450 Enzyme System - genetics</topic><topic>Cytochrome P450</topic><topic>Cytochrome P450 monooxygenase</topic><topic>Evolutionary conservation</topic><topic>Food chains</topic><topic>Gene expression</topic><topic>Gene regulation</topic><topic>Gene sequencing</topic><topic>Genes</topic><topic>Genome, Fungal - genetics</topic><topic>Genomes</topic><topic>Halogenase</topic><topic>Horizontal transfer</topic><topic>Metabolites</topic><topic>Multigene Family - genetics</topic><topic>Mycotoxins</topic><topic>Mycotoxins - genetics</topic><topic>Mycotoxins - metabolism</topic><topic>NRPS</topic><topic>Ochratoxin A</topic><topic>Ochratoxins - biosynthesis</topic><topic>Orthology</topic><topic>P450</topic><topic>Penicillium</topic><topic>Penicillium - genetics</topic><topic>Penicillium - metabolism</topic><topic>Peptide Synthases - genetics</topic><topic>PKS</topic><topic>Polyketide synthase</topic><topic>Polyketide Synthases - genetics</topic><topic>Polymerase chain reaction</topic><topic>Proteins</topic><topic>Species</topic><topic>Synteny</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Gil-Serna, Jessica</creatorcontrib><creatorcontrib>García-Díaz, Marta</creatorcontrib><creatorcontrib>González-Jaén, María Teresa</creatorcontrib><creatorcontrib>Vázquez, Covadonga</creatorcontrib><creatorcontrib>Patiño, Belén</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Biotechnology Research Abstracts</collection><collection>Chemoreception Abstracts</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Virology and AIDS Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><jtitle>International journal of food microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Gil-Serna, Jessica</au><au>García-Díaz, Marta</au><au>González-Jaén, María Teresa</au><au>Vázquez, Covadonga</au><au>Patiño, Belén</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Description of an orthologous cluster of ochratoxin A biosynthetic genes in Aspergillus and Penicillium species. A comparative analysis</atitle><jtitle>International journal of food microbiology</jtitle><addtitle>Int J Food Microbiol</addtitle><date>2018-03-02</date><risdate>2018</risdate><volume>268</volume><spage>35</spage><epage>43</epage><pages>35-43</pages><issn>0168-1605</issn><eissn>1879-3460</eissn><abstract>Ochratoxin A (OTA) is one of the most important mycotoxins due to its toxic properties and worldwide distribution which is produced by several Aspergillus and Penicillium species. The knowledge of OTA biosynthetic genes and understanding of the mechanisms involved in their regulation are essential. In this work, we obtained a clear picture of biosynthetic genes organization in the main OTA-producing Aspergillus and Penicillium species (A. steynii, A. westerdijkiae, A. niger, A. carbonarius and P. nordicum) using complete genome sequences obtained in this work or previously available on databases. The results revealed a region containing five ORFs which predicted five proteins: halogenase, bZIP transcription factor, cytochrome P450 monooxygenase, non-ribosomal peptide synthetase and polyketide synthase in all the five species. Genetic synteny was conserved in both Penicillium and Aspergillus species although genomic location seemed to be different since the clusters presented different flanking regions (except for A. steynii and A. westerdijkiae); these observations support the hypothesis of the orthology of this genomic region and that it might have been acquired by horizontal transfer. New real-time RT-PCR assays for quantification of the expression of these OTA biosynthetic genes were developed. In all species, the five genes were consistently expressed in OTA-producing strains in permissive conditions. These protocols might favour futures studies on the regulation of biosynthetic genes in order to develop new efficient control methods to avoid OTA entering the food chain. •A genomic region containing five ORFs was described in five OTA-producing species.•Its genetic synteny is conserved in Aspergillus and Penicillium species.•It is the first time that a similar cluster is described in Penicillium.•New specific real-time RT-PCR assays were designed to evaluate gene expression.•The five genes are only expressed in OTA producing strains.</abstract><cop>Netherlands</cop><pub>Elsevier B.V</pub><pmid>29324288</pmid><doi>10.1016/j.ijfoodmicro.2017.12.028</doi><tpages>9</tpages><orcidid>https://orcid.org/0000-0001-8023-1260</orcidid></addata></record>
fulltext fulltext
identifier ISSN: 0168-1605
ispartof International journal of food microbiology, 2018-03, Vol.268, p.35-43
issn 0168-1605
1879-3460
language eng
recordid cdi_proquest_journals_2045354063
source Elsevier ScienceDirect Journals Complete - AutoHoldings; MEDLINE
subjects Aspergillus
Aspergillus - genetics
Aspergillus - metabolism
Basic-Leucine Zipper Transcription Factors - genetics
Biosynthesis
bZIP
Cluster
Cluster analysis
Comparative analysis
Control methods
Cytochrome
Cytochrome P-450 Enzyme System - genetics
Cytochrome P450
Cytochrome P450 monooxygenase
Evolutionary conservation
Food chains
Gene expression
Gene regulation
Gene sequencing
Genes
Genome, Fungal - genetics
Genomes
Halogenase
Horizontal transfer
Metabolites
Multigene Family - genetics
Mycotoxins
Mycotoxins - genetics
Mycotoxins - metabolism
NRPS
Ochratoxin A
Ochratoxins - biosynthesis
Orthology
P450
Penicillium
Penicillium - genetics
Penicillium - metabolism
Peptide Synthases - genetics
PKS
Polyketide synthase
Polyketide Synthases - genetics
Polymerase chain reaction
Proteins
Species
Synteny
title Description of an orthologous cluster of ochratoxin A biosynthetic genes in Aspergillus and Penicillium species. A comparative analysis
url https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-14T07%3A26%3A30IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Description%20of%20an%20orthologous%20cluster%20of%20ochratoxin%20A%20biosynthetic%20genes%20in%20Aspergillus%20and%20Penicillium%20species.%20A%20comparative%20analysis&rft.jtitle=International%20journal%20of%20food%20microbiology&rft.au=Gil-Serna,%20Jessica&rft.date=2018-03-02&rft.volume=268&rft.spage=35&rft.epage=43&rft.pages=35-43&rft.issn=0168-1605&rft.eissn=1879-3460&rft_id=info:doi/10.1016/j.ijfoodmicro.2017.12.028&rft_dat=%3Cproquest_cross%3E2045354063%3C/proquest_cross%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=2045354063&rft_id=info:pmid/29324288&rft_els_id=S0168160517305573&rfr_iscdi=true