Using hyperspectral imaging to discriminate yellow leaf curl disease in tomato leaves
This paper investigated the possibility of discriminating tomato yellow leaf curl disease by a hyperspectral imaging technique. A hyperspecral imaging system collected hyperspectral images of both healthy and infected tomato leaves. The reflectance spectra, first derivative reflectance spectra and a...
Gespeichert in:
Veröffentlicht in: | Precision agriculture 2018-06, Vol.19 (3), p.379-394 |
---|---|
Hauptverfasser: | , , , |
Format: | Artikel |
Sprache: | eng |
Schlagworte: | |
Online-Zugang: | Volltext |
Tags: |
Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
|
container_end_page | 394 |
---|---|
container_issue | 3 |
container_start_page | 379 |
container_title | Precision agriculture |
container_volume | 19 |
creator | Lu, Jinzhu Zhou, Mingchuan Gao, Yingwang Jiang, Huanyu |
description | This paper investigated the possibility of discriminating tomato yellow leaf curl disease by a hyperspectral imaging technique. A hyperspecral imaging system collected hyperspectral images of both healthy and infected tomato leaves. The reflectance spectra, first derivative reflectance spectra and absolute reflectance difference spectra in the wavelength range of 500–1000 nm of both background and the leaf area were analyzed to select sensitive wavelengths and band ratios. 853 nm was selected to create a mask image for background segmentation, while 720 nm from the reflectance spectra, four peaks (560, 575, 712, and 729 nm) from the first derivative spectra and, four wavelengths with higher values (586, 720 nm) and lower values (690, 840 nm) in the absolute difference spectra were selected as a set of sensitive wavelengths. Four band ratio images (560/575, 712/729, 586/690, and 720/840 nm) were compared with four widely used vegetation indices (VIs). 24 texture features were extracted using grey level co-occurrence matrix (GLCM), respectively. The performance of each feature was evaluated by receiver operator characteristic (ROC) curve analysis. The best threshold values of each feature were calculated by Yonden’s index. Mean value of correlation (COR_MEAN) extracted from the band ratio image (720/840 nm) had the best performance, whose AUC value was 1.0. The discrimination result for a validation set based on its best threshold value was 100%. This research also demonstrated that multispectral images at 560, 575 and 720 nm have a potential for detecting tomato yellow leaf curl virus infection in field applications. |
doi_str_mv | 10.1007/s11119-017-9524-7 |
format | Article |
fullrecord | <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_journals_2031667390</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>2031667390</sourcerecordid><originalsourceid>FETCH-LOGICAL-c316t-f181fc521d7f9d099301fcf7d1aa19272c034898e33b8f84954ff9e8387ebaff3</originalsourceid><addsrcrecordid>eNp1kE9PxCAQxYnRxHX1A3gj8Ywy0BY4mo3_EhMv7pmwdFi76bYVupr99tLUxJNcYJjfe5N5hFwDvwXO1V2CfAzjoJgpRcHUCVlAqSSDCvRpfktdMiHK6pxcpLTjPKsKsSDrdWq6Lf04DhjTgH6MrqXN3m2n37GndZN8bPZN50akR2zb_pu26AL1h9hOXXQJadNldu8yn3tfmC7JWXBtwqvfe0nWjw_vq2f2-vb0srp_ZV5CNbIAGoIvBdQqmJobI3mug6rBOTBCCc9loY1GKTc66MKURQgGtdQKNy4EuSQ3s-8Q-88DptHu-kPs8kgreB5RKWl4pmCmfOxTihjskFdy8WiB2yk9O6dnc3p2Ss-qrBGzJmW222L8c_5f9AMwwHLX</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>2031667390</pqid></control><display><type>article</type><title>Using hyperspectral imaging to discriminate yellow leaf curl disease in tomato leaves</title><source>Springer Nature - Complete Springer Journals</source><creator>Lu, Jinzhu ; Zhou, Mingchuan ; Gao, Yingwang ; Jiang, Huanyu</creator><creatorcontrib>Lu, Jinzhu ; Zhou, Mingchuan ; Gao, Yingwang ; Jiang, Huanyu</creatorcontrib><description>This paper investigated the possibility of discriminating tomato yellow leaf curl disease by a hyperspectral imaging technique. A hyperspecral imaging system collected hyperspectral images of both healthy and infected tomato leaves. The reflectance spectra, first derivative reflectance spectra and absolute reflectance difference spectra in the wavelength range of 500–1000 nm of both background and the leaf area were analyzed to select sensitive wavelengths and band ratios. 853 nm was selected to create a mask image for background segmentation, while 720 nm from the reflectance spectra, four peaks (560, 575, 712, and 729 nm) from the first derivative spectra and, four wavelengths with higher values (586, 720 nm) and lower values (690, 840 nm) in the absolute difference spectra were selected as a set of sensitive wavelengths. Four band ratio images (560/575, 712/729, 586/690, and 720/840 nm) were compared with four widely used vegetation indices (VIs). 24 texture features were extracted using grey level co-occurrence matrix (GLCM), respectively. The performance of each feature was evaluated by receiver operator characteristic (ROC) curve analysis. The best threshold values of each feature were calculated by Yonden’s index. Mean value of correlation (COR_MEAN) extracted from the band ratio image (720/840 nm) had the best performance, whose AUC value was 1.0. The discrimination result for a validation set based on its best threshold value was 100%. This research also demonstrated that multispectral images at 560, 575 and 720 nm have a potential for detecting tomato yellow leaf curl virus infection in field applications.</description><identifier>ISSN: 1385-2256</identifier><identifier>EISSN: 1573-1618</identifier><identifier>DOI: 10.1007/s11119-017-9524-7</identifier><language>eng</language><publisher>New York: Springer US</publisher><subject>Accuracy ; Agriculture ; Atmospheric Sciences ; Biomedical and Life Sciences ; Chemistry and Earth Sciences ; Computer Science ; Feature extraction ; Hyperspectral imaging ; Image processing ; Image segmentation ; Infections ; Leaf area ; Leaves ; Life Sciences ; Physics ; Plant diseases ; Principal components analysis ; Reflectance ; Remote Sensing/Photogrammetry ; Soil Science & Conservation ; Spectra ; Spectrum analysis ; Statistics for Engineering ; Support vector machines ; Tomatoes ; Viruses ; Vision systems ; Wavelengths ; Yellow leaf</subject><ispartof>Precision agriculture, 2018-06, Vol.19 (3), p.379-394</ispartof><rights>Springer Science+Business Media New York 2017</rights><rights>Precision Agriculture is a copyright of Springer, (2017). All Rights Reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c316t-f181fc521d7f9d099301fcf7d1aa19272c034898e33b8f84954ff9e8387ebaff3</citedby><cites>FETCH-LOGICAL-c316t-f181fc521d7f9d099301fcf7d1aa19272c034898e33b8f84954ff9e8387ebaff3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s11119-017-9524-7$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s11119-017-9524-7$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,776,780,27901,27902,41464,42533,51294</link.rule.ids></links><search><creatorcontrib>Lu, Jinzhu</creatorcontrib><creatorcontrib>Zhou, Mingchuan</creatorcontrib><creatorcontrib>Gao, Yingwang</creatorcontrib><creatorcontrib>Jiang, Huanyu</creatorcontrib><title>Using hyperspectral imaging to discriminate yellow leaf curl disease in tomato leaves</title><title>Precision agriculture</title><addtitle>Precision Agric</addtitle><description>This paper investigated the possibility of discriminating tomato yellow leaf curl disease by a hyperspectral imaging technique. A hyperspecral imaging system collected hyperspectral images of both healthy and infected tomato leaves. The reflectance spectra, first derivative reflectance spectra and absolute reflectance difference spectra in the wavelength range of 500–1000 nm of both background and the leaf area were analyzed to select sensitive wavelengths and band ratios. 853 nm was selected to create a mask image for background segmentation, while 720 nm from the reflectance spectra, four peaks (560, 575, 712, and 729 nm) from the first derivative spectra and, four wavelengths with higher values (586, 720 nm) and lower values (690, 840 nm) in the absolute difference spectra were selected as a set of sensitive wavelengths. Four band ratio images (560/575, 712/729, 586/690, and 720/840 nm) were compared with four widely used vegetation indices (VIs). 24 texture features were extracted using grey level co-occurrence matrix (GLCM), respectively. The performance of each feature was evaluated by receiver operator characteristic (ROC) curve analysis. The best threshold values of each feature were calculated by Yonden’s index. Mean value of correlation (COR_MEAN) extracted from the band ratio image (720/840 nm) had the best performance, whose AUC value was 1.0. The discrimination result for a validation set based on its best threshold value was 100%. This research also demonstrated that multispectral images at 560, 575 and 720 nm have a potential for detecting tomato yellow leaf curl virus infection in field applications.</description><subject>Accuracy</subject><subject>Agriculture</subject><subject>Atmospheric Sciences</subject><subject>Biomedical and Life Sciences</subject><subject>Chemistry and Earth Sciences</subject><subject>Computer Science</subject><subject>Feature extraction</subject><subject>Hyperspectral imaging</subject><subject>Image processing</subject><subject>Image segmentation</subject><subject>Infections</subject><subject>Leaf area</subject><subject>Leaves</subject><subject>Life Sciences</subject><subject>Physics</subject><subject>Plant diseases</subject><subject>Principal components analysis</subject><subject>Reflectance</subject><subject>Remote Sensing/Photogrammetry</subject><subject>Soil Science & Conservation</subject><subject>Spectra</subject><subject>Spectrum analysis</subject><subject>Statistics for Engineering</subject><subject>Support vector machines</subject><subject>Tomatoes</subject><subject>Viruses</subject><subject>Vision systems</subject><subject>Wavelengths</subject><subject>Yellow leaf</subject><issn>1385-2256</issn><issn>1573-1618</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2018</creationdate><recordtype>article</recordtype><sourceid>BENPR</sourceid><recordid>eNp1kE9PxCAQxYnRxHX1A3gj8Ywy0BY4mo3_EhMv7pmwdFi76bYVupr99tLUxJNcYJjfe5N5hFwDvwXO1V2CfAzjoJgpRcHUCVlAqSSDCvRpfktdMiHK6pxcpLTjPKsKsSDrdWq6Lf04DhjTgH6MrqXN3m2n37GndZN8bPZN50akR2zb_pu26AL1h9hOXXQJadNldu8yn3tfmC7JWXBtwqvfe0nWjw_vq2f2-vb0srp_ZV5CNbIAGoIvBdQqmJobI3mug6rBOTBCCc9loY1GKTc66MKURQgGtdQKNy4EuSQ3s-8Q-88DptHu-kPs8kgreB5RKWl4pmCmfOxTihjskFdy8WiB2yk9O6dnc3p2Ss-qrBGzJmW222L8c_5f9AMwwHLX</recordid><startdate>20180601</startdate><enddate>20180601</enddate><creator>Lu, Jinzhu</creator><creator>Zhou, Mingchuan</creator><creator>Gao, Yingwang</creator><creator>Jiang, Huanyu</creator><general>Springer US</general><general>Springer Nature B.V</general><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7ST</scope><scope>7WY</scope><scope>7WZ</scope><scope>7X2</scope><scope>7XB</scope><scope>87Z</scope><scope>88I</scope><scope>8FE</scope><scope>8FH</scope><scope>8FK</scope><scope>8FL</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BENPR</scope><scope>BEZIV</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FRNLG</scope><scope>F~G</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>K60</scope><scope>K6~</scope><scope>L.-</scope><scope>M0C</scope><scope>M0K</scope><scope>M2P</scope><scope>PATMY</scope><scope>PQBIZ</scope><scope>PQBZA</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PYCSY</scope><scope>Q9U</scope><scope>SOI</scope></search><sort><creationdate>20180601</creationdate><title>Using hyperspectral imaging to discriminate yellow leaf curl disease in tomato leaves</title><author>Lu, Jinzhu ; Zhou, Mingchuan ; Gao, Yingwang ; Jiang, Huanyu</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c316t-f181fc521d7f9d099301fcf7d1aa19272c034898e33b8f84954ff9e8387ebaff3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2018</creationdate><topic>Accuracy</topic><topic>Agriculture</topic><topic>Atmospheric Sciences</topic><topic>Biomedical and Life Sciences</topic><topic>Chemistry and Earth Sciences</topic><topic>Computer Science</topic><topic>Feature extraction</topic><topic>Hyperspectral imaging</topic><topic>Image processing</topic><topic>Image segmentation</topic><topic>Infections</topic><topic>Leaf area</topic><topic>Leaves</topic><topic>Life Sciences</topic><topic>Physics</topic><topic>Plant diseases</topic><topic>Principal components analysis</topic><topic>Reflectance</topic><topic>Remote Sensing/Photogrammetry</topic><topic>Soil Science & Conservation</topic><topic>Spectra</topic><topic>Spectrum analysis</topic><topic>Statistics for Engineering</topic><topic>Support vector machines</topic><topic>Tomatoes</topic><topic>Viruses</topic><topic>Vision systems</topic><topic>Wavelengths</topic><topic>Yellow leaf</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Lu, Jinzhu</creatorcontrib><creatorcontrib>Zhou, Mingchuan</creatorcontrib><creatorcontrib>Gao, Yingwang</creatorcontrib><creatorcontrib>Jiang, Huanyu</creatorcontrib><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Environment Abstracts</collection><collection>ABI/INFORM Collection</collection><collection>ABI/INFORM Global (PDF only)</collection><collection>Agricultural Science Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>ABI/INFORM Global (Alumni Edition)</collection><collection>Science Database (Alumni Edition)</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ABI/INFORM Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest One Sustainability</collection><collection>ProQuest Central UK/Ireland</collection><collection>Agricultural & Environmental Science Collection</collection><collection>ProQuest Central Essentials</collection><collection>ProQuest Central</collection><collection>Business Premium Collection</collection><collection>Natural Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Business Premium Collection (Alumni)</collection><collection>ABI/INFORM Global (Corporate)</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Business Collection (Alumni Edition)</collection><collection>ProQuest Business Collection</collection><collection>ABI/INFORM Professional Advanced</collection><collection>ABI/INFORM Global</collection><collection>Agricultural Science Database</collection><collection>Science Database</collection><collection>Environmental Science Database</collection><collection>ProQuest One Business</collection><collection>ProQuest One Business (Alumni)</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>Environmental Science Collection</collection><collection>ProQuest Central Basic</collection><collection>Environment Abstracts</collection><jtitle>Precision agriculture</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Lu, Jinzhu</au><au>Zhou, Mingchuan</au><au>Gao, Yingwang</au><au>Jiang, Huanyu</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Using hyperspectral imaging to discriminate yellow leaf curl disease in tomato leaves</atitle><jtitle>Precision agriculture</jtitle><stitle>Precision Agric</stitle><date>2018-06-01</date><risdate>2018</risdate><volume>19</volume><issue>3</issue><spage>379</spage><epage>394</epage><pages>379-394</pages><issn>1385-2256</issn><eissn>1573-1618</eissn><abstract>This paper investigated the possibility of discriminating tomato yellow leaf curl disease by a hyperspectral imaging technique. A hyperspecral imaging system collected hyperspectral images of both healthy and infected tomato leaves. The reflectance spectra, first derivative reflectance spectra and absolute reflectance difference spectra in the wavelength range of 500–1000 nm of both background and the leaf area were analyzed to select sensitive wavelengths and band ratios. 853 nm was selected to create a mask image for background segmentation, while 720 nm from the reflectance spectra, four peaks (560, 575, 712, and 729 nm) from the first derivative spectra and, four wavelengths with higher values (586, 720 nm) and lower values (690, 840 nm) in the absolute difference spectra were selected as a set of sensitive wavelengths. Four band ratio images (560/575, 712/729, 586/690, and 720/840 nm) were compared with four widely used vegetation indices (VIs). 24 texture features were extracted using grey level co-occurrence matrix (GLCM), respectively. The performance of each feature was evaluated by receiver operator characteristic (ROC) curve analysis. The best threshold values of each feature were calculated by Yonden’s index. Mean value of correlation (COR_MEAN) extracted from the band ratio image (720/840 nm) had the best performance, whose AUC value was 1.0. The discrimination result for a validation set based on its best threshold value was 100%. This research also demonstrated that multispectral images at 560, 575 and 720 nm have a potential for detecting tomato yellow leaf curl virus infection in field applications.</abstract><cop>New York</cop><pub>Springer US</pub><doi>10.1007/s11119-017-9524-7</doi><tpages>16</tpages></addata></record> |
fulltext | fulltext |
identifier | ISSN: 1385-2256 |
ispartof | Precision agriculture, 2018-06, Vol.19 (3), p.379-394 |
issn | 1385-2256 1573-1618 |
language | eng |
recordid | cdi_proquest_journals_2031667390 |
source | Springer Nature - Complete Springer Journals |
subjects | Accuracy Agriculture Atmospheric Sciences Biomedical and Life Sciences Chemistry and Earth Sciences Computer Science Feature extraction Hyperspectral imaging Image processing Image segmentation Infections Leaf area Leaves Life Sciences Physics Plant diseases Principal components analysis Reflectance Remote Sensing/Photogrammetry Soil Science & Conservation Spectra Spectrum analysis Statistics for Engineering Support vector machines Tomatoes Viruses Vision systems Wavelengths Yellow leaf |
title | Using hyperspectral imaging to discriminate yellow leaf curl disease in tomato leaves |
url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-02-14T12%3A34%3A21IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Using%20hyperspectral%20imaging%20to%20discriminate%20yellow%20leaf%20curl%20disease%20in%20tomato%20leaves&rft.jtitle=Precision%20agriculture&rft.au=Lu,%20Jinzhu&rft.date=2018-06-01&rft.volume=19&rft.issue=3&rft.spage=379&rft.epage=394&rft.pages=379-394&rft.issn=1385-2256&rft.eissn=1573-1618&rft_id=info:doi/10.1007/s11119-017-9524-7&rft_dat=%3Cproquest_cross%3E2031667390%3C/proquest_cross%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=2031667390&rft_id=info:pmid/&rfr_iscdi=true |