Cloning of ho gene from Gracilariopsis lemaneiformis and study on its function on the synthesis of a fluorescent phycoerythrobilin in heterologous hosts
Heme oxygenase catalyzes the rate-limiting step in the degradation of heme to biliverdin. Two new genes of heme oxygenases, ho-1 and ho-2 , were cloned from the red alga Gracilariopsis lemaneiformis . Their corresponding proteins both belonged to Heme 0 superfamily. The full-length DNA of ho-1 conta...
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creator | Jin, Yuming Zang, Xiaonan Huang, Xiaoyun Cao, Xuexue Sun, Deguang Lin, Jiaojiao Liu, Zhu Liu, Chang Guo, Yalin Wang, Zhendong Hou, Lulu |
description | Heme oxygenase catalyzes the rate-limiting step in the degradation of heme to biliverdin. Two new genes of heme oxygenases,
ho-1
and
ho-2
, were cloned from the red alga
Gracilariopsis lemaneiformis
. Their corresponding proteins both belonged to Heme 0 superfamily. The full-length DNA of
ho-1
contained 696 nucleotides encoding a protein of 231 amino acids, and the full-length DNA of
ho-2
contained 819 nucleotides encoding a protein of 272 amino acids. In order to study the functions of HO-1 and HO-2 in synthesis of phycoerythrobilin, plasmids pET-24a(+)-
ho1-pebA-pebB
and pET-24a(+)-
ho2-pebA-pebB
were constructed (
pebA
,
pebB
were the coding genes of ferredoxin-dependent bilin reductases (FDBRs) of
G. lemaneiformis
that were cloned by our laboratory). Then these two plasmids were co-transformed with pACYC-Duet-
peBA
(
peBA
was the coding gene of two subunits of apo-phycoerythrin), respectively, into
E.coli
BL21 (DE3). The recombinant proteins presented the characteristic peak of phycoerythrin at 580 nm by fluorescence spectroscopy detection, and the maximum peak appeared at 15 h. The study of heme oxygenase had a positive effect on studying of the pathway for the synthesis of a fluorescent phycoerythrobilin in
Gracilariopsis lemaneiformis
. |
doi_str_mv | 10.1007/s10811-018-1464-8 |
format | Article |
fullrecord | <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_journals_2027405437</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>2027405437</sourcerecordid><originalsourceid>FETCH-LOGICAL-c316t-a5acd4d73e67d858058dbbf6b4263ffd40e7502836d2c0e0e4e52d336a065393</originalsourceid><addsrcrecordid>eNp1kM1qHDEQhEWwIWvHD5CbIOdxWqPRzx7D4tgBQy6-C-2otSMzK20kzWHexI8bLWvwydBQNFRVNx8h3xncMwD1szDQjHXAdMcGOXT6C9kwoXgnmJJXZAPbnnV6q9hXclPKKwBsNdMb8rabUwzxQJOnU6IHjEh9Tkf6mO0YZptDOpVQ6IxHGzH4lI9ts9HRUhe30hRpqIX6JY41tKVNnZCWNTY5B1uvpX5eUsYyYqz0NK1jwrzWKad9mEMriHTCijnN6ZCW0v4otXwj197OBe_e9Za8_H542T11z38f_-x-PXcjZ7J2VtjRDU5xlMppoUFot997uR96yb13A6AS0GsuXT8CAg4oese5tCAF3_Jb8uNSe8rp34Klmte05Ngumh56NYAYuGoudnGNOZWS0ZtTDkebV8PAnPmbC3_T-Jszf6Nbpr9kSvPGA-aP5s9D_wFpsYwa</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>2027405437</pqid></control><display><type>article</type><title>Cloning of ho gene from Gracilariopsis lemaneiformis and study on its function on the synthesis of a fluorescent phycoerythrobilin in heterologous hosts</title><source>SpringerLink Journals - AutoHoldings</source><creator>Jin, Yuming ; Zang, Xiaonan ; Huang, Xiaoyun ; Cao, Xuexue ; Sun, Deguang ; Lin, Jiaojiao ; Liu, Zhu ; Liu, Chang ; Guo, Yalin ; Wang, Zhendong ; Hou, Lulu</creator><creatorcontrib>Jin, Yuming ; Zang, Xiaonan ; Huang, Xiaoyun ; Cao, Xuexue ; Sun, Deguang ; Lin, Jiaojiao ; Liu, Zhu ; Liu, Chang ; Guo, Yalin ; Wang, Zhendong ; Hou, Lulu</creatorcontrib><description>Heme oxygenase catalyzes the rate-limiting step in the degradation of heme to biliverdin. Two new genes of heme oxygenases,
ho-1
and
ho-2
, were cloned from the red alga
Gracilariopsis lemaneiformis
. Their corresponding proteins both belonged to Heme 0 superfamily. The full-length DNA of
ho-1
contained 696 nucleotides encoding a protein of 231 amino acids, and the full-length DNA of
ho-2
contained 819 nucleotides encoding a protein of 272 amino acids. In order to study the functions of HO-1 and HO-2 in synthesis of phycoerythrobilin, plasmids pET-24a(+)-
ho1-pebA-pebB
and pET-24a(+)-
ho2-pebA-pebB
were constructed (
pebA
,
pebB
were the coding genes of ferredoxin-dependent bilin reductases (FDBRs) of
G. lemaneiformis
that were cloned by our laboratory). Then these two plasmids were co-transformed with pACYC-Duet-
peBA
(
peBA
was the coding gene of two subunits of apo-phycoerythrin), respectively, into
E.coli
BL21 (DE3). The recombinant proteins presented the characteristic peak of phycoerythrin at 580 nm by fluorescence spectroscopy detection, and the maximum peak appeared at 15 h. The study of heme oxygenase had a positive effect on studying of the pathway for the synthesis of a fluorescent phycoerythrobilin in
Gracilariopsis lemaneiformis
.</description><identifier>ISSN: 0921-8971</identifier><identifier>EISSN: 1573-5176</identifier><identifier>DOI: 10.1007/s10811-018-1464-8</identifier><language>eng</language><publisher>Dordrecht: Springer Netherlands</publisher><subject>8th Asian Pacific Phycological Forum ; Amino acids ; Analytical methods ; Biliverdin ; Biomedical and Life Sciences ; Chemical synthesis ; Cloning ; Deoxyribonucleic acid ; Detection ; DNA ; E coli ; Ecology ; Ferredoxin ; Fluorescence ; Fluorescence spectroscopy ; Freshwater & Marine Ecology ; Genes ; Gracilariopsis ; Heme ; HO gene ; Life Sciences ; Nucleotides ; Oxygenase ; Plant Physiology ; Plant Sciences ; Plasmids ; Proteins ; Recombinants ; Reductases</subject><ispartof>Journal of applied phycology, 2018-12, Vol.30 (6), p.3351-3359</ispartof><rights>Springer Science+Business Media B.V., part of Springer Nature 2018</rights><rights>Journal of Applied Phycology is a copyright of Springer, (2018). All Rights Reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c316t-a5acd4d73e67d858058dbbf6b4263ffd40e7502836d2c0e0e4e52d336a065393</citedby><cites>FETCH-LOGICAL-c316t-a5acd4d73e67d858058dbbf6b4263ffd40e7502836d2c0e0e4e52d336a065393</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s10811-018-1464-8$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s10811-018-1464-8$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,780,784,27923,27924,41487,42556,51318</link.rule.ids></links><search><creatorcontrib>Jin, Yuming</creatorcontrib><creatorcontrib>Zang, Xiaonan</creatorcontrib><creatorcontrib>Huang, Xiaoyun</creatorcontrib><creatorcontrib>Cao, Xuexue</creatorcontrib><creatorcontrib>Sun, Deguang</creatorcontrib><creatorcontrib>Lin, Jiaojiao</creatorcontrib><creatorcontrib>Liu, Zhu</creatorcontrib><creatorcontrib>Liu, Chang</creatorcontrib><creatorcontrib>Guo, Yalin</creatorcontrib><creatorcontrib>Wang, Zhendong</creatorcontrib><creatorcontrib>Hou, Lulu</creatorcontrib><title>Cloning of ho gene from Gracilariopsis lemaneiformis and study on its function on the synthesis of a fluorescent phycoerythrobilin in heterologous hosts</title><title>Journal of applied phycology</title><addtitle>J Appl Phycol</addtitle><description>Heme oxygenase catalyzes the rate-limiting step in the degradation of heme to biliverdin. Two new genes of heme oxygenases,
ho-1
and
ho-2
, were cloned from the red alga
Gracilariopsis lemaneiformis
. Their corresponding proteins both belonged to Heme 0 superfamily. The full-length DNA of
ho-1
contained 696 nucleotides encoding a protein of 231 amino acids, and the full-length DNA of
ho-2
contained 819 nucleotides encoding a protein of 272 amino acids. In order to study the functions of HO-1 and HO-2 in synthesis of phycoerythrobilin, plasmids pET-24a(+)-
ho1-pebA-pebB
and pET-24a(+)-
ho2-pebA-pebB
were constructed (
pebA
,
pebB
were the coding genes of ferredoxin-dependent bilin reductases (FDBRs) of
G. lemaneiformis
that were cloned by our laboratory). Then these two plasmids were co-transformed with pACYC-Duet-
peBA
(
peBA
was the coding gene of two subunits of apo-phycoerythrin), respectively, into
E.coli
BL21 (DE3). The recombinant proteins presented the characteristic peak of phycoerythrin at 580 nm by fluorescence spectroscopy detection, and the maximum peak appeared at 15 h. The study of heme oxygenase had a positive effect on studying of the pathway for the synthesis of a fluorescent phycoerythrobilin in
Gracilariopsis lemaneiformis
.</description><subject>8th Asian Pacific Phycological Forum</subject><subject>Amino acids</subject><subject>Analytical methods</subject><subject>Biliverdin</subject><subject>Biomedical and Life Sciences</subject><subject>Chemical synthesis</subject><subject>Cloning</subject><subject>Deoxyribonucleic acid</subject><subject>Detection</subject><subject>DNA</subject><subject>E coli</subject><subject>Ecology</subject><subject>Ferredoxin</subject><subject>Fluorescence</subject><subject>Fluorescence spectroscopy</subject><subject>Freshwater & Marine Ecology</subject><subject>Genes</subject><subject>Gracilariopsis</subject><subject>Heme</subject><subject>HO gene</subject><subject>Life Sciences</subject><subject>Nucleotides</subject><subject>Oxygenase</subject><subject>Plant Physiology</subject><subject>Plant Sciences</subject><subject>Plasmids</subject><subject>Proteins</subject><subject>Recombinants</subject><subject>Reductases</subject><issn>0921-8971</issn><issn>1573-5176</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2018</creationdate><recordtype>article</recordtype><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNp1kM1qHDEQhEWwIWvHD5CbIOdxWqPRzx7D4tgBQy6-C-2otSMzK20kzWHexI8bLWvwydBQNFRVNx8h3xncMwD1szDQjHXAdMcGOXT6C9kwoXgnmJJXZAPbnnV6q9hXclPKKwBsNdMb8rabUwzxQJOnU6IHjEh9Tkf6mO0YZptDOpVQ6IxHGzH4lI9ts9HRUhe30hRpqIX6JY41tKVNnZCWNTY5B1uvpX5eUsYyYqz0NK1jwrzWKad9mEMriHTCijnN6ZCW0v4otXwj197OBe_e9Za8_H542T11z38f_-x-PXcjZ7J2VtjRDU5xlMppoUFot997uR96yb13A6AS0GsuXT8CAg4oese5tCAF3_Jb8uNSe8rp34Klmte05Ngumh56NYAYuGoudnGNOZWS0ZtTDkebV8PAnPmbC3_T-Jszf6Nbpr9kSvPGA-aP5s9D_wFpsYwa</recordid><startdate>20181201</startdate><enddate>20181201</enddate><creator>Jin, Yuming</creator><creator>Zang, Xiaonan</creator><creator>Huang, Xiaoyun</creator><creator>Cao, Xuexue</creator><creator>Sun, Deguang</creator><creator>Lin, Jiaojiao</creator><creator>Liu, Zhu</creator><creator>Liu, Chang</creator><creator>Guo, Yalin</creator><creator>Wang, Zhendong</creator><creator>Hou, Lulu</creator><general>Springer Netherlands</general><general>Springer Nature B.V</general><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7TN</scope><scope>7X2</scope><scope>8FE</scope><scope>8FH</scope><scope>8FK</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>F1W</scope><scope>GNUQQ</scope><scope>H95</scope><scope>HCIFZ</scope><scope>L.G</scope><scope>LK8</scope><scope>M0K</scope><scope>M7N</scope><scope>M7P</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope></search><sort><creationdate>20181201</creationdate><title>Cloning of ho gene from Gracilariopsis lemaneiformis and study on its function on the synthesis of a fluorescent phycoerythrobilin in heterologous hosts</title><author>Jin, Yuming ; Zang, Xiaonan ; Huang, Xiaoyun ; Cao, Xuexue ; Sun, Deguang ; Lin, Jiaojiao ; Liu, Zhu ; Liu, Chang ; Guo, Yalin ; Wang, Zhendong ; Hou, Lulu</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c316t-a5acd4d73e67d858058dbbf6b4263ffd40e7502836d2c0e0e4e52d336a065393</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2018</creationdate><topic>8th Asian Pacific Phycological Forum</topic><topic>Amino acids</topic><topic>Analytical methods</topic><topic>Biliverdin</topic><topic>Biomedical and Life Sciences</topic><topic>Chemical synthesis</topic><topic>Cloning</topic><topic>Deoxyribonucleic acid</topic><topic>Detection</topic><topic>DNA</topic><topic>E coli</topic><topic>Ecology</topic><topic>Ferredoxin</topic><topic>Fluorescence</topic><topic>Fluorescence spectroscopy</topic><topic>Freshwater & Marine Ecology</topic><topic>Genes</topic><topic>Gracilariopsis</topic><topic>Heme</topic><topic>HO gene</topic><topic>Life Sciences</topic><topic>Nucleotides</topic><topic>Oxygenase</topic><topic>Plant Physiology</topic><topic>Plant Sciences</topic><topic>Plasmids</topic><topic>Proteins</topic><topic>Recombinants</topic><topic>Reductases</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Jin, Yuming</creatorcontrib><creatorcontrib>Zang, Xiaonan</creatorcontrib><creatorcontrib>Huang, Xiaoyun</creatorcontrib><creatorcontrib>Cao, Xuexue</creatorcontrib><creatorcontrib>Sun, Deguang</creatorcontrib><creatorcontrib>Lin, Jiaojiao</creatorcontrib><creatorcontrib>Liu, Zhu</creatorcontrib><creatorcontrib>Liu, Chang</creatorcontrib><creatorcontrib>Guo, Yalin</creatorcontrib><creatorcontrib>Wang, Zhendong</creatorcontrib><creatorcontrib>Hou, Lulu</creatorcontrib><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Oceanic Abstracts</collection><collection>Agricultural Science Collection</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest One Sustainability</collection><collection>ProQuest Central UK/Ireland</collection><collection>Agricultural & Environmental Science Collection</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>ProQuest Central Student</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 1: Biological Sciences & Living Resources</collection><collection>SciTech Premium Collection</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Professional</collection><collection>ProQuest Biological Science Collection</collection><collection>Agricultural Science Database</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biological Science Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><jtitle>Journal of applied phycology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Jin, Yuming</au><au>Zang, Xiaonan</au><au>Huang, Xiaoyun</au><au>Cao, Xuexue</au><au>Sun, Deguang</au><au>Lin, Jiaojiao</au><au>Liu, Zhu</au><au>Liu, Chang</au><au>Guo, Yalin</au><au>Wang, Zhendong</au><au>Hou, Lulu</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Cloning of ho gene from Gracilariopsis lemaneiformis and study on its function on the synthesis of a fluorescent phycoerythrobilin in heterologous hosts</atitle><jtitle>Journal of applied phycology</jtitle><stitle>J Appl Phycol</stitle><date>2018-12-01</date><risdate>2018</risdate><volume>30</volume><issue>6</issue><spage>3351</spage><epage>3359</epage><pages>3351-3359</pages><issn>0921-8971</issn><eissn>1573-5176</eissn><abstract>Heme oxygenase catalyzes the rate-limiting step in the degradation of heme to biliverdin. Two new genes of heme oxygenases,
ho-1
and
ho-2
, were cloned from the red alga
Gracilariopsis lemaneiformis
. Their corresponding proteins both belonged to Heme 0 superfamily. The full-length DNA of
ho-1
contained 696 nucleotides encoding a protein of 231 amino acids, and the full-length DNA of
ho-2
contained 819 nucleotides encoding a protein of 272 amino acids. In order to study the functions of HO-1 and HO-2 in synthesis of phycoerythrobilin, plasmids pET-24a(+)-
ho1-pebA-pebB
and pET-24a(+)-
ho2-pebA-pebB
were constructed (
pebA
,
pebB
were the coding genes of ferredoxin-dependent bilin reductases (FDBRs) of
G. lemaneiformis
that were cloned by our laboratory). Then these two plasmids were co-transformed with pACYC-Duet-
peBA
(
peBA
was the coding gene of two subunits of apo-phycoerythrin), respectively, into
E.coli
BL21 (DE3). The recombinant proteins presented the characteristic peak of phycoerythrin at 580 nm by fluorescence spectroscopy detection, and the maximum peak appeared at 15 h. The study of heme oxygenase had a positive effect on studying of the pathway for the synthesis of a fluorescent phycoerythrobilin in
Gracilariopsis lemaneiformis
.</abstract><cop>Dordrecht</cop><pub>Springer Netherlands</pub><doi>10.1007/s10811-018-1464-8</doi><tpages>9</tpages></addata></record> |
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subjects | 8th Asian Pacific Phycological Forum Amino acids Analytical methods Biliverdin Biomedical and Life Sciences Chemical synthesis Cloning Deoxyribonucleic acid Detection DNA E coli Ecology Ferredoxin Fluorescence Fluorescence spectroscopy Freshwater & Marine Ecology Genes Gracilariopsis Heme HO gene Life Sciences Nucleotides Oxygenase Plant Physiology Plant Sciences Plasmids Proteins Recombinants Reductases |
title | Cloning of ho gene from Gracilariopsis lemaneiformis and study on its function on the synthesis of a fluorescent phycoerythrobilin in heterologous hosts |
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