Developmentally Dynamic Histone Acetylation Pattern of a Tissue-Specific Chromatin Domain
We have defined the histone acetylation pattern of the endogenous murine β-globin domain, which contains the erythroid-specific β-globin genes. The β-globin locus control region (LCR) and transcriptionally active promoters were enriched in acetylated histones in fetal liver relative to fetal brain,...
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Veröffentlicht in: | Proceedings of the National Academy of Sciences - PNAS 2000-12, Vol.97 (26), p.14494-14499 |
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creator | Forsberg, E C Downs, K M Christensen, H M Im, H Nuzzi, P A Bresnick, E H |
description | We have defined the histone acetylation pattern of the endogenous murine β-globin domain, which contains the erythroid-specific β-globin genes. The β-globin locus control region (LCR) and transcriptionally active promoters were enriched in acetylated histones in fetal liver relative to fetal brain, whereas the inactive promoters were hypoacetylated. In contrast, the LCR and both active and inactive promoters were hyperacetylated in yolk sac. Hypersensitive site two of the LCR was also hyperacetylated in murine embryonic stem cells, whereas β-globin promoters were hypoacetylated. Thus, the acetylation pattern varied at different developmental stages. Histone deacetylase inhibition selectively increased acetylation at a hypoacetylated promoter in fetal liver, suggesting that active deacetylation contributes to silencing of promoters. We propose that dynamic histone acetylation and deacetylation play an important role in the developmental control of β-globin gene expression. |
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The β-globin locus control region (LCR) and transcriptionally active promoters were enriched in acetylated histones in fetal liver relative to fetal brain, whereas the inactive promoters were hypoacetylated. In contrast, the LCR and both active and inactive promoters were hyperacetylated in yolk sac. Hypersensitive site two of the LCR was also hyperacetylated in murine embryonic stem cells, whereas β-globin promoters were hypoacetylated. Thus, the acetylation pattern varied at different developmental stages. Histone deacetylase inhibition selectively increased acetylation at a hypoacetylated promoter in fetal liver, suggesting that active deacetylation contributes to silencing of promoters. We propose that dynamic histone acetylation and deacetylation play an important role in the developmental control of β-globin gene expression.</description><identifier>ISSN: 0027-8424</identifier><identifier>EISSN: 1091-6490</identifier><identifier>DOI: 10.1073/pnas.97.26.14494</identifier><identifier>PMID: 11121052</identifier><language>eng</language><publisher>United States: National Academy of Sciences of the United States of America</publisher><subject>Acetylation ; Acetyltransferases - metabolism ; Animals ; b-globin ; Binding Sites ; Biological Sciences ; Chromatin ; DNA ; Genes ; Genetic loci ; Genetics ; Globins - genetics ; Histone Acetyltransferases ; Histones ; Histones - metabolism ; Leukemia, Erythroblastic, Acute ; Liver ; Liver - embryology ; Liver cells ; Locus Control Region ; Mice ; Promoter Regions, Genetic ; Saccharomyces cerevisiae Proteins ; Tissues ; Tumor Cells, Cultured ; Yolk sac</subject><ispartof>Proceedings of the National Academy of Sciences - PNAS, 2000-12, Vol.97 (26), p.14494-14499</ispartof><rights>Copyright 1993-2000 National Academy of Sciences of the United States of America</rights><rights>Copyright National Academy of Sciences Dec 19, 2000</rights><rights>Copyright © 2000, The National Academy of Sciences 2000</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c592t-29f6607279750cd46aea1ea9316ab6413ad718f625fc8341b3c02e8b9f4a0e0c3</citedby><cites>FETCH-LOGICAL-c592t-29f6607279750cd46aea1ea9316ab6413ad718f625fc8341b3c02e8b9f4a0e0c3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Uhttp://www.pnas.org/content/97/26.cover.gif</thumbnail><linktopdf>$$Uhttps://www.jstor.org/stable/pdf/2666324$$EPDF$$P50$$Gjstor$$H</linktopdf><linktohtml>$$Uhttps://www.jstor.org/stable/2666324$$EHTML$$P50$$Gjstor$$H</linktohtml><link.rule.ids>230,315,729,782,786,805,887,27931,27932,53798,53800,58024,58257</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/11121052$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Forsberg, E C</creatorcontrib><creatorcontrib>Downs, K M</creatorcontrib><creatorcontrib>Christensen, H M</creatorcontrib><creatorcontrib>Im, H</creatorcontrib><creatorcontrib>Nuzzi, P A</creatorcontrib><creatorcontrib>Bresnick, E H</creatorcontrib><title>Developmentally Dynamic Histone Acetylation Pattern of a Tissue-Specific Chromatin Domain</title><title>Proceedings of the National Academy of Sciences - PNAS</title><addtitle>Proc Natl Acad Sci U S A</addtitle><description>We have defined the histone acetylation pattern of the endogenous murine β-globin domain, which contains the erythroid-specific β-globin genes. The β-globin locus control region (LCR) and transcriptionally active promoters were enriched in acetylated histones in fetal liver relative to fetal brain, whereas the inactive promoters were hypoacetylated. In contrast, the LCR and both active and inactive promoters were hyperacetylated in yolk sac. Hypersensitive site two of the LCR was also hyperacetylated in murine embryonic stem cells, whereas β-globin promoters were hypoacetylated. Thus, the acetylation pattern varied at different developmental stages. Histone deacetylase inhibition selectively increased acetylation at a hypoacetylated promoter in fetal liver, suggesting that active deacetylation contributes to silencing of promoters. We propose that dynamic histone acetylation and deacetylation play an important role in the developmental control of β-globin gene expression.</description><subject>Acetylation</subject><subject>Acetyltransferases - metabolism</subject><subject>Animals</subject><subject>b-globin</subject><subject>Binding Sites</subject><subject>Biological Sciences</subject><subject>Chromatin</subject><subject>DNA</subject><subject>Genes</subject><subject>Genetic loci</subject><subject>Genetics</subject><subject>Globins - genetics</subject><subject>Histone Acetyltransferases</subject><subject>Histones</subject><subject>Histones - metabolism</subject><subject>Leukemia, Erythroblastic, Acute</subject><subject>Liver</subject><subject>Liver - embryology</subject><subject>Liver cells</subject><subject>Locus Control Region</subject><subject>Mice</subject><subject>Promoter Regions, Genetic</subject><subject>Saccharomyces cerevisiae Proteins</subject><subject>Tissues</subject><subject>Tumor Cells, Cultured</subject><subject>Yolk sac</subject><issn>0027-8424</issn><issn>1091-6490</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2000</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFksGPEyEUh4nRuHX17sHoxIPxMpUHDAyJl02rrskmmrgePBFKGZeGgQrMxv73UltX14Oe3uF93wvv_UDoMeA5YEFfbYPOcynmhM-BMcnuoBlgCS1nEt9FM4yJaHtG2Al6kPMGYyy7Ht9HJwBAAHdkhr4s7bX1cTvaULT3u2a5C3p0pjl3ucRgmzNjy87r4mJoPupSbApNHBrdXLqcJ9t-2lrjhiosrlIcKxeaZa0uPET3Bu2zfXSsp-jz2zeXi_P24sO794uzi9Z0kpSWyIFzLIiQosNmzbi2GqyWFLhecQZUrwX0AyfdYHrKYEUNJrZfyYFpbLGhp-j1Ye52Wo12beoiSXu1TW7Uaaeidup2J7gr9TVeK-glE1V_cdRT_DbZXNTosrHe62DjlJUgrKcC-H9BEILWULoKPv8L3MQphXoDRTDQXnYSKoQPkEkx52SHmwcDVvts1T5bJYUiXP3MtipP_1z0t3AMswLPjsBe_dW-PeLlvwk1TN4X-71U9MkB3dR_kG5YwjmnhNEfwBPCxA</recordid><startdate>20001219</startdate><enddate>20001219</enddate><creator>Forsberg, E C</creator><creator>Downs, K M</creator><creator>Christensen, H M</creator><creator>Im, H</creator><creator>Nuzzi, P A</creator><creator>Bresnick, E H</creator><general>National Academy of Sciences of the United States of America</general><general>National Acad Sciences</general><general>National Academy of Sciences</general><general>The National Academy of Sciences</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QG</scope><scope>7QL</scope><scope>7QP</scope><scope>7QR</scope><scope>7SN</scope><scope>7SS</scope><scope>7T5</scope><scope>7TK</scope><scope>7TM</scope><scope>7TO</scope><scope>7U9</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>H94</scope><scope>M7N</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20001219</creationdate><title>Developmentally Dynamic Histone Acetylation Pattern of a Tissue-Specific Chromatin Domain</title><author>Forsberg, E C ; Downs, K M ; Christensen, H M ; Im, H ; Nuzzi, P A ; Bresnick, E H</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c592t-29f6607279750cd46aea1ea9316ab6413ad718f625fc8341b3c02e8b9f4a0e0c3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2000</creationdate><topic>Acetylation</topic><topic>Acetyltransferases - metabolism</topic><topic>Animals</topic><topic>b-globin</topic><topic>Binding Sites</topic><topic>Biological Sciences</topic><topic>Chromatin</topic><topic>DNA</topic><topic>Genes</topic><topic>Genetic loci</topic><topic>Genetics</topic><topic>Globins - genetics</topic><topic>Histone Acetyltransferases</topic><topic>Histones</topic><topic>Histones - metabolism</topic><topic>Leukemia, Erythroblastic, Acute</topic><topic>Liver</topic><topic>Liver - embryology</topic><topic>Liver cells</topic><topic>Locus Control Region</topic><topic>Mice</topic><topic>Promoter Regions, Genetic</topic><topic>Saccharomyces cerevisiae Proteins</topic><topic>Tissues</topic><topic>Tumor Cells, Cultured</topic><topic>Yolk sac</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Forsberg, E C</creatorcontrib><creatorcontrib>Downs, K M</creatorcontrib><creatorcontrib>Christensen, H M</creatorcontrib><creatorcontrib>Im, H</creatorcontrib><creatorcontrib>Nuzzi, P A</creatorcontrib><creatorcontrib>Bresnick, E H</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Animal Behavior Abstracts</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Calcium & Calcified Tissue Abstracts</collection><collection>Chemoreception Abstracts</collection><collection>Ecology Abstracts</collection><collection>Entomology Abstracts (Full archive)</collection><collection>Immunology Abstracts</collection><collection>Neurosciences Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Oncogenes and Growth Factors Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Proceedings of the National Academy of Sciences - PNAS</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Forsberg, E C</au><au>Downs, K M</au><au>Christensen, H M</au><au>Im, H</au><au>Nuzzi, P A</au><au>Bresnick, E H</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Developmentally Dynamic Histone Acetylation Pattern of a Tissue-Specific Chromatin Domain</atitle><jtitle>Proceedings of the National Academy of Sciences - PNAS</jtitle><addtitle>Proc Natl Acad Sci U S A</addtitle><date>2000-12-19</date><risdate>2000</risdate><volume>97</volume><issue>26</issue><spage>14494</spage><epage>14499</epage><pages>14494-14499</pages><issn>0027-8424</issn><eissn>1091-6490</eissn><abstract>We have defined the histone acetylation pattern of the endogenous murine β-globin domain, which contains the erythroid-specific β-globin genes. The β-globin locus control region (LCR) and transcriptionally active promoters were enriched in acetylated histones in fetal liver relative to fetal brain, whereas the inactive promoters were hypoacetylated. In contrast, the LCR and both active and inactive promoters were hyperacetylated in yolk sac. Hypersensitive site two of the LCR was also hyperacetylated in murine embryonic stem cells, whereas β-globin promoters were hypoacetylated. Thus, the acetylation pattern varied at different developmental stages. Histone deacetylase inhibition selectively increased acetylation at a hypoacetylated promoter in fetal liver, suggesting that active deacetylation contributes to silencing of promoters. 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subjects | Acetylation Acetyltransferases - metabolism Animals b-globin Binding Sites Biological Sciences Chromatin DNA Genes Genetic loci Genetics Globins - genetics Histone Acetyltransferases Histones Histones - metabolism Leukemia, Erythroblastic, Acute Liver Liver - embryology Liver cells Locus Control Region Mice Promoter Regions, Genetic Saccharomyces cerevisiae Proteins Tissues Tumor Cells, Cultured Yolk sac |
title | Developmentally Dynamic Histone Acetylation Pattern of a Tissue-Specific Chromatin Domain |
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