Complete mitochondrial genome of a Pleistocene jawbone unveils the origin of polar bear
The polar bear has become the flagship species in the climate-change discussion. However, little is known about how past climate impacted its evolution and persistence, given an extremely poor fossil record. Although it is undisputed from analyses of mitochondrial (mt) DNA that polar bears constitut...
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creator | Lindqvist, Charlotte Schuster, Stephan C Sun, Yazhou Talbot, Sandra L Qi, Ji Ratan, Aakrosh Tomsho, Lynn P Kasson, Lindsay Zeyl, Eve Aars, Jon Miller, Webb Ingólfsson, Ólafur Bachmann, Lutz Wiig, Øystein |
description | The polar bear has become the flagship species in the climate-change discussion. However, little is known about how past climate impacted its evolution and persistence, given an extremely poor fossil record. Although it is undisputed from analyses of mitochondrial (mt) DNA that polar bears constitute a lineage within the genetic diversity of brown bears, timing estimates of their divergence have differed considerably. Using next-generation sequencing technology, we have generated a complete, high-quality mt genome from a stratigraphically validated 130,000- to 110,000-year-old polar bear jawbone. In addition, six mt genomes were generated of extant polar bears from Alaska and brown bears from the Admiralty and Baranof islands of the Alexander Archipelago of southeastern Alaska and Kodiak Island. We show that the phylogenetic position of the ancient polar bear lies almost directly at the branching point between polar bears and brown bears, elucidating a unique morphologically and molecularly documented fossil link between living mammal species. Molecular dating and stable isotope analyses also show that by very early in their evolutionary history, polar bears were already inhabitants of the Artic sea ice and had adapted very rapidly to their current and unique ecology at the top of the Arctic marine food chain. As such, polar bears provide an excellent example of evolutionary opportunism within a widespread mammalian lineage. |
doi_str_mv | 10.1073/pnas.0914266107 |
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However, little is known about how past climate impacted its evolution and persistence, given an extremely poor fossil record. Although it is undisputed from analyses of mitochondrial (mt) DNA that polar bears constitute a lineage within the genetic diversity of brown bears, timing estimates of their divergence have differed considerably. Using next-generation sequencing technology, we have generated a complete, high-quality mt genome from a stratigraphically validated 130,000- to 110,000-year-old polar bear jawbone. In addition, six mt genomes were generated of extant polar bears from Alaska and brown bears from the Admiralty and Baranof islands of the Alexander Archipelago of southeastern Alaska and Kodiak Island. We show that the phylogenetic position of the ancient polar bear lies almost directly at the branching point between polar bears and brown bears, elucidating a unique morphologically and molecularly documented fossil link between living mammal species. Molecular dating and stable isotope analyses also show that by very early in their evolutionary history, polar bears were already inhabitants of the Artic sea ice and had adapted very rapidly to their current and unique ecology at the top of the Arctic marine food chain. As such, polar bears provide an excellent example of evolutionary opportunism within a widespread mammalian lineage.</description><identifier>ISSN: 0027-8424</identifier><identifier>EISSN: 1091-6490</identifier><identifier>DOI: 10.1073/pnas.0914266107</identifier><identifier>PMID: 20194737</identifier><language>eng</language><publisher>United States: National Academy of Sciences</publisher><subject>Animals ; Base Sequence ; Biological Evolution ; Biological Sciences ; Brown bears ; Deoxyribonucleic acid ; DNA ; Evolution ; Evolution & development ; Fossils ; Genetic diversity ; Genetic Variation ; Genome, Mitochondrial - genetics ; Genomes ; Genomics ; Isotopes ; Jaw - anatomy & histology ; Molecular Sequence Data ; Morphology ; Phylogenetics ; Phylogeny ; Polar bears ; Polymerase chain reaction ; Sequencing ; Time Factors ; Ursidae - anatomy & histology ; Ursidae - genetics</subject><ispartof>Proceedings of the National Academy of Sciences - PNAS, 2010-03, Vol.107 (11), p.5053-5057</ispartof><rights>Copyright National Academy of Sciences Mar 16, 2010</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-a610t-93e9c9073e56c22f0778f90a032121ca3213d7b656cc3f9da59b66ec2481132d3</citedby><cites>FETCH-LOGICAL-a610t-93e9c9073e56c22f0778f90a032121ca3213d7b656cc3f9da59b66ec2481132d3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Uhttp://www.pnas.org/content/107/11.cover.gif</thumbnail><linktopdf>$$Uhttps://www.jstor.org/stable/pdf/25664925$$EPDF$$P50$$Gjstor$$H</linktopdf><linktohtml>$$Uhttps://www.jstor.org/stable/25664925$$EHTML$$P50$$Gjstor$$H</linktohtml><link.rule.ids>230,314,727,780,784,803,885,27924,27925,53791,53793,58017,58250</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/20194737$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Lindqvist, Charlotte</creatorcontrib><creatorcontrib>Schuster, Stephan C</creatorcontrib><creatorcontrib>Sun, Yazhou</creatorcontrib><creatorcontrib>Talbot, Sandra L</creatorcontrib><creatorcontrib>Qi, Ji</creatorcontrib><creatorcontrib>Ratan, Aakrosh</creatorcontrib><creatorcontrib>Tomsho, Lynn P</creatorcontrib><creatorcontrib>Kasson, Lindsay</creatorcontrib><creatorcontrib>Zeyl, Eve</creatorcontrib><creatorcontrib>Aars, Jon</creatorcontrib><creatorcontrib>Miller, Webb</creatorcontrib><creatorcontrib>Ingólfsson, Ólafur</creatorcontrib><creatorcontrib>Bachmann, Lutz</creatorcontrib><creatorcontrib>Wiig, Øystein</creatorcontrib><title>Complete mitochondrial genome of a Pleistocene jawbone unveils the origin of polar bear</title><title>Proceedings of the National Academy of Sciences - PNAS</title><addtitle>Proc Natl Acad Sci U S A</addtitle><description>The polar bear has become the flagship species in the climate-change discussion. However, little is known about how past climate impacted its evolution and persistence, given an extremely poor fossil record. Although it is undisputed from analyses of mitochondrial (mt) DNA that polar bears constitute a lineage within the genetic diversity of brown bears, timing estimates of their divergence have differed considerably. Using next-generation sequencing technology, we have generated a complete, high-quality mt genome from a stratigraphically validated 130,000- to 110,000-year-old polar bear jawbone. In addition, six mt genomes were generated of extant polar bears from Alaska and brown bears from the Admiralty and Baranof islands of the Alexander Archipelago of southeastern Alaska and Kodiak Island. We show that the phylogenetic position of the ancient polar bear lies almost directly at the branching point between polar bears and brown bears, elucidating a unique morphologically and molecularly documented fossil link between living mammal species. Molecular dating and stable isotope analyses also show that by very early in their evolutionary history, polar bears were already inhabitants of the Artic sea ice and had adapted very rapidly to their current and unique ecology at the top of the Arctic marine food chain. 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subjects | Animals Base Sequence Biological Evolution Biological Sciences Brown bears Deoxyribonucleic acid DNA Evolution Evolution & development Fossils Genetic diversity Genetic Variation Genome, Mitochondrial - genetics Genomes Genomics Isotopes Jaw - anatomy & histology Molecular Sequence Data Morphology Phylogenetics Phylogeny Polar bears Polymerase chain reaction Sequencing Time Factors Ursidae - anatomy & histology Ursidae - genetics |
title | Complete mitochondrial genome of a Pleistocene jawbone unveils the origin of polar bear |
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