Biochemical, physiological, and molecular characterization of Dickeya dianthicola (formerly named Erwinia chrysanthemi) causing potato blackleg disease in Japan
The taxonomic assignment of Japanese potato blackleg isolates of Dickeya spp. has not been confirmed after the changes in their former name, Erwinia chrysanthemi . Therefore, we investigated and identified 23 representative isolates of Dickeya spp. from symptomatic stems of potatoes in Japan, with b...
Gespeichert in:
| Veröffentlicht in: | Journal of general plant pathology : JGPP 2018-03, Vol.84 (2), p.124-136 |
|---|---|
| Hauptverfasser: | , , , , , , |
| Format: | Artikel |
| Sprache: | eng |
| Schlagworte: | |
| Online-Zugang: | Volltext |
| Tags: |
Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
|
| container_end_page | 136 |
|---|---|
| container_issue | 2 |
| container_start_page | 124 |
| container_title | Journal of general plant pathology : JGPP |
| container_volume | 84 |
| creator | Fujimoto, Taketo Yasuoka, Shinji Aono, Yoshiyuki Nakayama, Takato Ohki, Takehiro Sayama, Mitsuru Maoka, Tetsuo |
| description | The taxonomic assignment of Japanese potato blackleg isolates of
Dickeya
spp. has not been confirmed after the changes in their former name,
Erwinia chrysanthemi
. Therefore, we investigated and identified 23 representative isolates of
Dickeya
spp. from symptomatic stems of potatoes in Japan, with biochemical tests and phylogenetic sequence analysis using
recA
,
dnaX
,
rpoD
,
gyrB
, and 16S rDNA sequences. Results of our biochemical tests showed that all isolates can be assigned to phenon 5 and biovar 1, which are associated with
D. dianthicola
. Based on the
recA
,
dnaX
,
rpoD
,
gyrB
, and 16S rDNA sequences, all isolates are in the same clade with
D. dianthicola
and were clearly distinguished from
D. chrysanthemi, D. dadantii, D. dadantii
subsp.
dieffenbachiae, D. solani, D. zeae
, and
D. paradisiaca
. Therefore, we conclude that
Dickeya
spp. isolated from potatoes with blackleg symptoms in Japan are
D. dianthicola
. |
| doi_str_mv | 10.1007/s10327-018-0772-9 |
| format | Article |
| fullrecord | <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_journals_1993584685</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>1993584685</sourcerecordid><originalsourceid>FETCH-LOGICAL-c360t-389f9d2f255be298104b1bed9a1a9e892bee5a70771a1d7f40edceba135afa1d3</originalsourceid><addsrcrecordid>eNp1kctq3TAQhk1ooWnaB-hOkE0KcaqLfWwt05NrCXTTQndiLI9tJbLkSjbFeZo8anRwF910NRf-_x-YL8s-MXrBKK2-REYFr3LK6pxWFc_lUXbMdozmlZC_3qReFGXOd4K-y97H-EgpZ6Iqj7OXr8brAUejwZ6TaVij8db32wiuJaO3qBcLgegBAugZg3mG2XhHfEeujH7CFUhrwM2D0d4COet8GDHYlTgYsSXX4Y9xBpI_rPEgS9c-Ew1LNK4nk59h9qSxoJ8s9ikpIkQkxpFvMIH7kL3twEb8-LeeZD9vrn_s7_KH77f3-8uHXIsdnXNRy062vONl2SCXNaNFwxpsJTCQWEveIJZQpd8wYG3VFRRbjQ0wUUKXNuIkO91yp-B_Lxhn9eiX4NJJxaQUZV3s6jKp2KbSwccYsFNTMCOEVTGqDiDUBkIlEOoAQsnk4ZsnJq3rMfyT_F_TK_sVj6s</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>1993584685</pqid></control><display><type>article</type><title>Biochemical, physiological, and molecular characterization of Dickeya dianthicola (formerly named Erwinia chrysanthemi) causing potato blackleg disease in Japan</title><source>SpringerLink</source><creator>Fujimoto, Taketo ; Yasuoka, Shinji ; Aono, Yoshiyuki ; Nakayama, Takato ; Ohki, Takehiro ; Sayama, Mitsuru ; Maoka, Tetsuo</creator><creatorcontrib>Fujimoto, Taketo ; Yasuoka, Shinji ; Aono, Yoshiyuki ; Nakayama, Takato ; Ohki, Takehiro ; Sayama, Mitsuru ; Maoka, Tetsuo</creatorcontrib><description>The taxonomic assignment of Japanese potato blackleg isolates of
Dickeya
spp. has not been confirmed after the changes in their former name,
Erwinia chrysanthemi
. Therefore, we investigated and identified 23 representative isolates of
Dickeya
spp. from symptomatic stems of potatoes in Japan, with biochemical tests and phylogenetic sequence analysis using
recA
,
dnaX
,
rpoD
,
gyrB
, and 16S rDNA sequences. Results of our biochemical tests showed that all isolates can be assigned to phenon 5 and biovar 1, which are associated with
D. dianthicola
. Based on the
recA
,
dnaX
,
rpoD
,
gyrB
, and 16S rDNA sequences, all isolates are in the same clade with
D. dianthicola
and were clearly distinguished from
D. chrysanthemi, D. dadantii, D. dadantii
subsp.
dieffenbachiae, D. solani, D. zeae
, and
D. paradisiaca
. Therefore, we conclude that
Dickeya
spp. isolated from potatoes with blackleg symptoms in Japan are
D. dianthicola
.</description><identifier>ISSN: 1345-2630</identifier><identifier>EISSN: 1610-739X</identifier><identifier>DOI: 10.1007/s10327-018-0772-9</identifier><language>eng</language><publisher>Tokyo: Springer Japan</publisher><subject>Agriculture ; Bacterial and Phytoplasma Diseases ; Biochemical tests ; Biochemistry ; Biomedical and Life Sciences ; Blackleg ; DNA topoisomerase ; Erwinia chrysanthemi ; Life Sciences ; Microbiology ; Pathogens ; Phylogeny ; Plant diseases ; Plant Pathology ; Plant populations ; Potatoes ; RecA protein ; rRNA 16S ; Vegetables</subject><ispartof>Journal of general plant pathology : JGPP, 2018-03, Vol.84 (2), p.124-136</ispartof><rights>The Phytopathological Society of Japan and Springer Japan KK, part of Springer Nature 2018</rights><rights>Journal of General Plant Pathology is a copyright of Springer, (2018). All Rights Reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c360t-389f9d2f255be298104b1bed9a1a9e892bee5a70771a1d7f40edceba135afa1d3</citedby><cites>FETCH-LOGICAL-c360t-389f9d2f255be298104b1bed9a1a9e892bee5a70771a1d7f40edceba135afa1d3</cites><orcidid>0000-0002-8893-2325</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s10327-018-0772-9$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s10327-018-0772-9$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,780,784,27924,27925,41488,42557,51319</link.rule.ids></links><search><creatorcontrib>Fujimoto, Taketo</creatorcontrib><creatorcontrib>Yasuoka, Shinji</creatorcontrib><creatorcontrib>Aono, Yoshiyuki</creatorcontrib><creatorcontrib>Nakayama, Takato</creatorcontrib><creatorcontrib>Ohki, Takehiro</creatorcontrib><creatorcontrib>Sayama, Mitsuru</creatorcontrib><creatorcontrib>Maoka, Tetsuo</creatorcontrib><title>Biochemical, physiological, and molecular characterization of Dickeya dianthicola (formerly named Erwinia chrysanthemi) causing potato blackleg disease in Japan</title><title>Journal of general plant pathology : JGPP</title><addtitle>J Gen Plant Pathol</addtitle><description>The taxonomic assignment of Japanese potato blackleg isolates of
Dickeya
spp. has not been confirmed after the changes in their former name,
Erwinia chrysanthemi
. Therefore, we investigated and identified 23 representative isolates of
Dickeya
spp. from symptomatic stems of potatoes in Japan, with biochemical tests and phylogenetic sequence analysis using
recA
,
dnaX
,
rpoD
,
gyrB
, and 16S rDNA sequences. Results of our biochemical tests showed that all isolates can be assigned to phenon 5 and biovar 1, which are associated with
D. dianthicola
. Based on the
recA
,
dnaX
,
rpoD
,
gyrB
, and 16S rDNA sequences, all isolates are in the same clade with
D. dianthicola
and were clearly distinguished from
D. chrysanthemi, D. dadantii, D. dadantii
subsp.
dieffenbachiae, D. solani, D. zeae
, and
D. paradisiaca
. Therefore, we conclude that
Dickeya
spp. isolated from potatoes with blackleg symptoms in Japan are
D. dianthicola
.</description><subject>Agriculture</subject><subject>Bacterial and Phytoplasma Diseases</subject><subject>Biochemical tests</subject><subject>Biochemistry</subject><subject>Biomedical and Life Sciences</subject><subject>Blackleg</subject><subject>DNA topoisomerase</subject><subject>Erwinia chrysanthemi</subject><subject>Life Sciences</subject><subject>Microbiology</subject><subject>Pathogens</subject><subject>Phylogeny</subject><subject>Plant diseases</subject><subject>Plant Pathology</subject><subject>Plant populations</subject><subject>Potatoes</subject><subject>RecA protein</subject><subject>rRNA 16S</subject><subject>Vegetables</subject><issn>1345-2630</issn><issn>1610-739X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2018</creationdate><recordtype>article</recordtype><sourceid>8G5</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><sourceid>GUQSH</sourceid><sourceid>M2O</sourceid><recordid>eNp1kctq3TAQhk1ooWnaB-hOkE0KcaqLfWwt05NrCXTTQndiLI9tJbLkSjbFeZo8anRwF910NRf-_x-YL8s-MXrBKK2-REYFr3LK6pxWFc_lUXbMdozmlZC_3qReFGXOd4K-y97H-EgpZ6Iqj7OXr8brAUejwZ6TaVij8db32wiuJaO3qBcLgegBAugZg3mG2XhHfEeujH7CFUhrwM2D0d4COet8GDHYlTgYsSXX4Y9xBpI_rPEgS9c-Ew1LNK4nk59h9qSxoJ8s9ikpIkQkxpFvMIH7kL3twEb8-LeeZD9vrn_s7_KH77f3-8uHXIsdnXNRy062vONl2SCXNaNFwxpsJTCQWEveIJZQpd8wYG3VFRRbjQ0wUUKXNuIkO91yp-B_Lxhn9eiX4NJJxaQUZV3s6jKp2KbSwccYsFNTMCOEVTGqDiDUBkIlEOoAQsnk4ZsnJq3rMfyT_F_TK_sVj6s</recordid><startdate>20180301</startdate><enddate>20180301</enddate><creator>Fujimoto, Taketo</creator><creator>Yasuoka, Shinji</creator><creator>Aono, Yoshiyuki</creator><creator>Nakayama, Takato</creator><creator>Ohki, Takehiro</creator><creator>Sayama, Mitsuru</creator><creator>Maoka, Tetsuo</creator><general>Springer Japan</general><general>Springer Nature B.V</general><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7QL</scope><scope>7T7</scope><scope>7U9</scope><scope>7X2</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>8AO</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>8G5</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>BKSAR</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>GUQSH</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0K</scope><scope>M0S</scope><scope>M2O</scope><scope>M7N</scope><scope>M7P</scope><scope>MBDVC</scope><scope>P64</scope><scope>PCBAR</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>Q9U</scope><orcidid>https://orcid.org/0000-0002-8893-2325</orcidid></search><sort><creationdate>20180301</creationdate><title>Biochemical, physiological, and molecular characterization of Dickeya dianthicola (formerly named Erwinia chrysanthemi) causing potato blackleg disease in Japan</title><author>Fujimoto, Taketo ; Yasuoka, Shinji ; Aono, Yoshiyuki ; Nakayama, Takato ; Ohki, Takehiro ; Sayama, Mitsuru ; Maoka, Tetsuo</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c360t-389f9d2f255be298104b1bed9a1a9e892bee5a70771a1d7f40edceba135afa1d3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2018</creationdate><topic>Agriculture</topic><topic>Bacterial and Phytoplasma Diseases</topic><topic>Biochemical tests</topic><topic>Biochemistry</topic><topic>Biomedical and Life Sciences</topic><topic>Blackleg</topic><topic>DNA topoisomerase</topic><topic>Erwinia chrysanthemi</topic><topic>Life Sciences</topic><topic>Microbiology</topic><topic>Pathogens</topic><topic>Phylogeny</topic><topic>Plant diseases</topic><topic>Plant Pathology</topic><topic>Plant populations</topic><topic>Potatoes</topic><topic>RecA protein</topic><topic>rRNA 16S</topic><topic>Vegetables</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Fujimoto, Taketo</creatorcontrib><creatorcontrib>Yasuoka, Shinji</creatorcontrib><creatorcontrib>Aono, Yoshiyuki</creatorcontrib><creatorcontrib>Nakayama, Takato</creatorcontrib><creatorcontrib>Ohki, Takehiro</creatorcontrib><creatorcontrib>Sayama, Mitsuru</creatorcontrib><creatorcontrib>Maoka, Tetsuo</creatorcontrib><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Virology and AIDS Abstracts</collection><collection>Agricultural Science Collection</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>Research Library (Alumni Edition)</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest Central UK/Ireland</collection><collection>Agricultural & Environmental Science Collection</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>ProQuest Natural Science Collection</collection><collection>Earth, Atmospheric & Aquatic Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>Research Library Prep</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Agriculture Science Database</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Research Library</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biological Science Database</collection><collection>Research Library (Corporate)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Earth, Atmospheric & Aquatic Science Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central Basic</collection><jtitle>Journal of general plant pathology : JGPP</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Fujimoto, Taketo</au><au>Yasuoka, Shinji</au><au>Aono, Yoshiyuki</au><au>Nakayama, Takato</au><au>Ohki, Takehiro</au><au>Sayama, Mitsuru</au><au>Maoka, Tetsuo</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Biochemical, physiological, and molecular characterization of Dickeya dianthicola (formerly named Erwinia chrysanthemi) causing potato blackleg disease in Japan</atitle><jtitle>Journal of general plant pathology : JGPP</jtitle><stitle>J Gen Plant Pathol</stitle><date>2018-03-01</date><risdate>2018</risdate><volume>84</volume><issue>2</issue><spage>124</spage><epage>136</epage><pages>124-136</pages><issn>1345-2630</issn><eissn>1610-739X</eissn><abstract>The taxonomic assignment of Japanese potato blackleg isolates of
Dickeya
spp. has not been confirmed after the changes in their former name,
Erwinia chrysanthemi
. Therefore, we investigated and identified 23 representative isolates of
Dickeya
spp. from symptomatic stems of potatoes in Japan, with biochemical tests and phylogenetic sequence analysis using
recA
,
dnaX
,
rpoD
,
gyrB
, and 16S rDNA sequences. Results of our biochemical tests showed that all isolates can be assigned to phenon 5 and biovar 1, which are associated with
D. dianthicola
. Based on the
recA
,
dnaX
,
rpoD
,
gyrB
, and 16S rDNA sequences, all isolates are in the same clade with
D. dianthicola
and were clearly distinguished from
D. chrysanthemi, D. dadantii, D. dadantii
subsp.
dieffenbachiae, D. solani, D. zeae
, and
D. paradisiaca
. Therefore, we conclude that
Dickeya
spp. isolated from potatoes with blackleg symptoms in Japan are
D. dianthicola
.</abstract><cop>Tokyo</cop><pub>Springer Japan</pub><doi>10.1007/s10327-018-0772-9</doi><tpages>13</tpages><orcidid>https://orcid.org/0000-0002-8893-2325</orcidid></addata></record> |
| fulltext | fulltext |
| identifier | ISSN: 1345-2630 |
| ispartof | Journal of general plant pathology : JGPP, 2018-03, Vol.84 (2), p.124-136 |
| issn | 1345-2630 1610-739X |
| language | eng |
| recordid | cdi_proquest_journals_1993584685 |
| source | SpringerLink |
| subjects | Agriculture Bacterial and Phytoplasma Diseases Biochemical tests Biochemistry Biomedical and Life Sciences Blackleg DNA topoisomerase Erwinia chrysanthemi Life Sciences Microbiology Pathogens Phylogeny Plant diseases Plant Pathology Plant populations Potatoes RecA protein rRNA 16S Vegetables |
| title | Biochemical, physiological, and molecular characterization of Dickeya dianthicola (formerly named Erwinia chrysanthemi) causing potato blackleg disease in Japan |
| url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-03T17%3A43%3A54IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Biochemical,%20physiological,%20and%20molecular%20characterization%20of%20Dickeya%20dianthicola%20(formerly%20named%20Erwinia%20chrysanthemi)%20causing%20potato%20blackleg%20disease%20in%20Japan&rft.jtitle=Journal%20of%20general%20plant%20pathology%20:%20JGPP&rft.au=Fujimoto,%20Taketo&rft.date=2018-03-01&rft.volume=84&rft.issue=2&rft.spage=124&rft.epage=136&rft.pages=124-136&rft.issn=1345-2630&rft.eissn=1610-739X&rft_id=info:doi/10.1007/s10327-018-0772-9&rft_dat=%3Cproquest_cross%3E1993584685%3C/proquest_cross%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=1993584685&rft_id=info:pmid/&rfr_iscdi=true |