Isolation and characterization of twenty-one novel microsatellite loci for the black cicada, Cryptotympana atrata (Hemiptera: Cicadidae)
To study population genetics and facilitate species identification, we developed 21 polymorphic microsatellite loci for Cryptotympana atrata (Fabricius), a widespread insect that makes a loud, high-pitched noise. Polymorphisms detected in 28 individuals ranged from 2 to 18 alleles per locus. The obs...
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| Veröffentlicht in: | Applied entomology and zoology 2016-08, Vol.51 (3), p.511-514 |
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| container_title | Applied entomology and zoology |
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| creator | Zhu, Wanchao Li, Haotian Zhang, Huanxin Zhang, Honghai Lv, Tianshu Xue, Shuyu Chen, Jun |
| description | To study population genetics and facilitate species identification, we developed 21 polymorphic microsatellite loci for
Cryptotympana atrata
(Fabricius), a widespread insect that makes a loud, high-pitched noise. Polymorphisms detected in 28 individuals ranged from 2 to 18 alleles per locus. The observed and expected heterozygosity ranged from 0.0714 to 0.9286 and from 0.0689 to 0.9082, respectively. The polymorphic information content value ranged from about 0.0670 to 0.9017. One locus showed low polymorphism (PIC |
| doi_str_mv | 10.1007/s13355-016-0424-5 |
| format | Article |
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Cryptotympana atrata
(Fabricius), a widespread insect that makes a loud, high-pitched noise. Polymorphisms detected in 28 individuals ranged from 2 to 18 alleles per locus. The observed and expected heterozygosity ranged from 0.0714 to 0.9286 and from 0.0689 to 0.9082, respectively. The polymorphic information content value ranged from about 0.0670 to 0.9017. One locus showed low polymorphism (PIC <0.25) and two loci showed moderate polymorphism (0.25 < PIC < 0.5), while the rest were highly polymorphic (PIC >0.5). Three loci showed significant deviations from Hardy–Weinberg equilibrium after Bonferroni correction. These microsatellite markers will be useful tools for the conservation genetic study of this species.</description><identifier>ISSN: 0003-6862</identifier><identifier>EISSN: 1347-605X</identifier><identifier>DOI: 10.1007/s13355-016-0424-5</identifier><language>eng</language><publisher>Tokyo: Springer Japan</publisher><subject>Agriculture ; Applied Ecology ; Biomedical and Life Sciences ; Entomology ; Environmental Management ; Gene loci ; Genetic markers ; Heterozygosity ; Life Sciences ; Microsatellites ; Plant Pathology ; Population genetics ; Population studies ; Technical Note ; Zoology</subject><ispartof>Applied entomology and zoology, 2016-08, Vol.51 (3), p.511-514</ispartof><rights>The Japanese Society of Applied Entomology and Zoology 2016</rights><rights>Copyright Springer Science & Business Media 2016</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c409t-d5939a6a73f13f496501be0c370c8e54b47ed0e5efe2b38a172a2621b035fce53</citedby><cites>FETCH-LOGICAL-c409t-d5939a6a73f13f496501be0c370c8e54b47ed0e5efe2b38a172a2621b035fce53</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s13355-016-0424-5$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s13355-016-0424-5$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,776,780,27901,27902,41464,42533,51294</link.rule.ids></links><search><creatorcontrib>Zhu, Wanchao</creatorcontrib><creatorcontrib>Li, Haotian</creatorcontrib><creatorcontrib>Zhang, Huanxin</creatorcontrib><creatorcontrib>Zhang, Honghai</creatorcontrib><creatorcontrib>Lv, Tianshu</creatorcontrib><creatorcontrib>Xue, Shuyu</creatorcontrib><creatorcontrib>Chen, Jun</creatorcontrib><title>Isolation and characterization of twenty-one novel microsatellite loci for the black cicada, Cryptotympana atrata (Hemiptera: Cicadidae)</title><title>Applied entomology and zoology</title><addtitle>Appl Entomol Zool</addtitle><description>To study population genetics and facilitate species identification, we developed 21 polymorphic microsatellite loci for
Cryptotympana atrata
(Fabricius), a widespread insect that makes a loud, high-pitched noise. Polymorphisms detected in 28 individuals ranged from 2 to 18 alleles per locus. The observed and expected heterozygosity ranged from 0.0714 to 0.9286 and from 0.0689 to 0.9082, respectively. The polymorphic information content value ranged from about 0.0670 to 0.9017. One locus showed low polymorphism (PIC <0.25) and two loci showed moderate polymorphism (0.25 < PIC < 0.5), while the rest were highly polymorphic (PIC >0.5). Three loci showed significant deviations from Hardy–Weinberg equilibrium after Bonferroni correction. These microsatellite markers will be useful tools for the conservation genetic study of this species.</description><subject>Agriculture</subject><subject>Applied Ecology</subject><subject>Biomedical and Life Sciences</subject><subject>Entomology</subject><subject>Environmental Management</subject><subject>Gene loci</subject><subject>Genetic markers</subject><subject>Heterozygosity</subject><subject>Life Sciences</subject><subject>Microsatellites</subject><subject>Plant Pathology</subject><subject>Population genetics</subject><subject>Population studies</subject><subject>Technical Note</subject><subject>Zoology</subject><issn>0003-6862</issn><issn>1347-605X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2016</creationdate><recordtype>article</recordtype><recordid>eNp1kM1q3TAQRkVJoDdpH6A7QTcJRO3oz77uLlyaJhDoJoHuxFgeN0p9LUdSGm6foI9dG3fRTVcDw5nvYw5j7yR8kAD1xyy1tlaArAQYZYR9xTZSm1pUYL8dsQ0AaFFtK_WaneT8CKBMszUb9vsmxwFLiCPHseP-ARP6Qin8Wpex5-WFxnIQcSQ-xp808H3wKWYsNAyhEB-iD7yPiZcH4u2A_gf3wWOHF3yXDlOJ5bCfcESOJWFBfnZN-zDNHfiJ7xYwdEjnb9hxj0Omt3_nKbu_-ny3uxa3X7_c7C5vhTfQFNHZRjdYYa17qXvTVBZkS-B1DX5L1rSmpg7IUk-q1VuUtUJVKdmCtr0nq0_Z-zV3SvHpmXJxj_E5jXOlk43Szdxi65mSK7V8mhP1bkphj-ngJLhFuFuFu1m4W4S7JVmtN3lmx--U_kn-79Ef78KFOw</recordid><startdate>20160801</startdate><enddate>20160801</enddate><creator>Zhu, Wanchao</creator><creator>Li, Haotian</creator><creator>Zhang, Huanxin</creator><creator>Zhang, Honghai</creator><creator>Lv, Tianshu</creator><creator>Xue, Shuyu</creator><creator>Chen, Jun</creator><general>Springer Japan</general><general>Springer Nature B.V</general><scope>AAYXX</scope><scope>CITATION</scope><scope>7SS</scope></search><sort><creationdate>20160801</creationdate><title>Isolation and characterization of twenty-one novel microsatellite loci for the black cicada, Cryptotympana atrata (Hemiptera: Cicadidae)</title><author>Zhu, Wanchao ; Li, Haotian ; Zhang, Huanxin ; Zhang, Honghai ; Lv, Tianshu ; Xue, Shuyu ; Chen, Jun</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c409t-d5939a6a73f13f496501be0c370c8e54b47ed0e5efe2b38a172a2621b035fce53</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2016</creationdate><topic>Agriculture</topic><topic>Applied Ecology</topic><topic>Biomedical and Life Sciences</topic><topic>Entomology</topic><topic>Environmental Management</topic><topic>Gene loci</topic><topic>Genetic markers</topic><topic>Heterozygosity</topic><topic>Life Sciences</topic><topic>Microsatellites</topic><topic>Plant Pathology</topic><topic>Population genetics</topic><topic>Population studies</topic><topic>Technical Note</topic><topic>Zoology</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Zhu, Wanchao</creatorcontrib><creatorcontrib>Li, Haotian</creatorcontrib><creatorcontrib>Zhang, Huanxin</creatorcontrib><creatorcontrib>Zhang, Honghai</creatorcontrib><creatorcontrib>Lv, Tianshu</creatorcontrib><creatorcontrib>Xue, Shuyu</creatorcontrib><creatorcontrib>Chen, Jun</creatorcontrib><collection>CrossRef</collection><collection>Entomology Abstracts (Full archive)</collection><jtitle>Applied entomology and zoology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Zhu, Wanchao</au><au>Li, Haotian</au><au>Zhang, Huanxin</au><au>Zhang, Honghai</au><au>Lv, Tianshu</au><au>Xue, Shuyu</au><au>Chen, Jun</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Isolation and characterization of twenty-one novel microsatellite loci for the black cicada, Cryptotympana atrata (Hemiptera: Cicadidae)</atitle><jtitle>Applied entomology and zoology</jtitle><stitle>Appl Entomol Zool</stitle><date>2016-08-01</date><risdate>2016</risdate><volume>51</volume><issue>3</issue><spage>511</spage><epage>514</epage><pages>511-514</pages><issn>0003-6862</issn><eissn>1347-605X</eissn><abstract>To study population genetics and facilitate species identification, we developed 21 polymorphic microsatellite loci for
Cryptotympana atrata
(Fabricius), a widespread insect that makes a loud, high-pitched noise. Polymorphisms detected in 28 individuals ranged from 2 to 18 alleles per locus. The observed and expected heterozygosity ranged from 0.0714 to 0.9286 and from 0.0689 to 0.9082, respectively. The polymorphic information content value ranged from about 0.0670 to 0.9017. One locus showed low polymorphism (PIC <0.25) and two loci showed moderate polymorphism (0.25 < PIC < 0.5), while the rest were highly polymorphic (PIC >0.5). Three loci showed significant deviations from Hardy–Weinberg equilibrium after Bonferroni correction. These microsatellite markers will be useful tools for the conservation genetic study of this species.</abstract><cop>Tokyo</cop><pub>Springer Japan</pub><doi>10.1007/s13355-016-0424-5</doi><tpages>4</tpages></addata></record> |
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| subjects | Agriculture Applied Ecology Biomedical and Life Sciences Entomology Environmental Management Gene loci Genetic markers Heterozygosity Life Sciences Microsatellites Plant Pathology Population genetics Population studies Technical Note Zoology |
| title | Isolation and characterization of twenty-one novel microsatellite loci for the black cicada, Cryptotympana atrata (Hemiptera: Cicadidae) |
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