In silico investigation of morpholines as novel class of trypanosomal triosephosphate isomerase inhibitors
Human African trypanosomiasis, also known as sleeping sickness , is caused by the single-celled kinetoplastid parasite Trypanosoma brucei transmitted to humans by infected tsetse flies. The disease threatens millions of people. Currently available treatment options are faced with some important chal...
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Veröffentlicht in: | Medicinal chemistry research 2017, Vol.26 (1), p.180-189 |
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creator | Ibezim, Akachukwu Nwodo, Ngozi Justina Nnaji, Nnaemeka J.N. Ujam, Oguejiofo T. Olubiyi, Olujide O. Mba, Chika J. |
description | Human African trypanosomiasis, also known as
sleeping sickness
, is caused by the single-celled kinetoplastid parasite
Trypanosoma brucei
transmitted to humans by infected tsetse flies. The disease threatens millions of people. Currently available treatment options are faced with some important challenges. In this work, a total of eighty-seven (87) morpholine derivatives were evaluated for drug-likeness based on Lipinski’s rule of five and their ability to inhibit the activities of trypanosomal triosephosphate isomerase was assessed by molecular docking and calculation of free energy of binding. Analysis of the results revealed that 97.7 % of the dataset complied with Lipinski’s criteria for a molecule to be orally bioavailable. Also, 50.0 % of the studied compounds had a good total polar surface area profile, a parameter which is of great importance for the treatment of stage two
Trypanosoma
infections. Docking studies showed that all the dataset demonstrated affinity for triosephosphate isomerase. Moreover, six morpholines scored higher than the co-crystallized inhibitor of triosephosphate isomerase (2-phosphoglycerate). These derivatives inhibited the activity of triosephosphate isomerase by making significant interactions with Glu 167, Val 214, 233, Asn 11, Lys 13, Ser 213, Leu 232, Ile 172, Gly 211, 212, 234, 235 and His 92 in the active site of the protein. Furthermore, besides the acceptable pharmacokinetic profiles of the six morpholines, they also showed inhibitory potencies toward four other validated antitrypanosomal drug targets. In view of the foregoing findings, we propose that the six morpholine derivatives be given worthwhile attention to develop them into novel trypanocides. |
doi_str_mv | 10.1007/s00044-016-1739-z |
format | Article |
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sleeping sickness
, is caused by the single-celled kinetoplastid parasite
Trypanosoma brucei
transmitted to humans by infected tsetse flies. The disease threatens millions of people. Currently available treatment options are faced with some important challenges. In this work, a total of eighty-seven (87) morpholine derivatives were evaluated for drug-likeness based on Lipinski’s rule of five and their ability to inhibit the activities of trypanosomal triosephosphate isomerase was assessed by molecular docking and calculation of free energy of binding. Analysis of the results revealed that 97.7 % of the dataset complied with Lipinski’s criteria for a molecule to be orally bioavailable. Also, 50.0 % of the studied compounds had a good total polar surface area profile, a parameter which is of great importance for the treatment of stage two
Trypanosoma
infections. Docking studies showed that all the dataset demonstrated affinity for triosephosphate isomerase. Moreover, six morpholines scored higher than the co-crystallized inhibitor of triosephosphate isomerase (2-phosphoglycerate). These derivatives inhibited the activity of triosephosphate isomerase by making significant interactions with Glu 167, Val 214, 233, Asn 11, Lys 13, Ser 213, Leu 232, Ile 172, Gly 211, 212, 234, 235 and His 92 in the active site of the protein. Furthermore, besides the acceptable pharmacokinetic profiles of the six morpholines, they also showed inhibitory potencies toward four other validated antitrypanosomal drug targets. In view of the foregoing findings, we propose that the six morpholine derivatives be given worthwhile attention to develop them into novel trypanocides.</description><identifier>ISSN: 1054-2523</identifier><identifier>EISSN: 1554-8120</identifier><identifier>DOI: 10.1007/s00044-016-1739-z</identifier><language>eng</language><publisher>New York: Springer US</publisher><subject>African trypanosomiasis ; Bioavailability ; Biochemistry ; Biomedical and Life Sciences ; Biomedicine ; Cell Biology ; Crystallization ; Datasets ; Derivatives ; Free energy ; Mathematical analysis ; Molecular docking ; Morpholine ; Original Research ; Pharmacology/Toxicology ; Triose-phosphate isomerase ; Trypanocides</subject><ispartof>Medicinal chemistry research, 2017, Vol.26 (1), p.180-189</ispartof><rights>Springer Science+Business Media New York 2016</rights><rights>Copyright Springer Science & Business Media 2017</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c316t-209e14e58bc752696f985fee760d783e9581898f4590c09d14d369d469f8a4143</citedby><cites>FETCH-LOGICAL-c316t-209e14e58bc752696f985fee760d783e9581898f4590c09d14d369d469f8a4143</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s00044-016-1739-z$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s00044-016-1739-z$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,780,784,27924,27925,41488,42557,51319</link.rule.ids></links><search><creatorcontrib>Ibezim, Akachukwu</creatorcontrib><creatorcontrib>Nwodo, Ngozi Justina</creatorcontrib><creatorcontrib>Nnaji, Nnaemeka J.N.</creatorcontrib><creatorcontrib>Ujam, Oguejiofo T.</creatorcontrib><creatorcontrib>Olubiyi, Olujide O.</creatorcontrib><creatorcontrib>Mba, Chika J.</creatorcontrib><title>In silico investigation of morpholines as novel class of trypanosomal triosephosphate isomerase inhibitors</title><title>Medicinal chemistry research</title><addtitle>Med Chem Res</addtitle><description>Human African trypanosomiasis, also known as
sleeping sickness
, is caused by the single-celled kinetoplastid parasite
Trypanosoma brucei
transmitted to humans by infected tsetse flies. The disease threatens millions of people. Currently available treatment options are faced with some important challenges. In this work, a total of eighty-seven (87) morpholine derivatives were evaluated for drug-likeness based on Lipinski’s rule of five and their ability to inhibit the activities of trypanosomal triosephosphate isomerase was assessed by molecular docking and calculation of free energy of binding. Analysis of the results revealed that 97.7 % of the dataset complied with Lipinski’s criteria for a molecule to be orally bioavailable. Also, 50.0 % of the studied compounds had a good total polar surface area profile, a parameter which is of great importance for the treatment of stage two
Trypanosoma
infections. Docking studies showed that all the dataset demonstrated affinity for triosephosphate isomerase. Moreover, six morpholines scored higher than the co-crystallized inhibitor of triosephosphate isomerase (2-phosphoglycerate). These derivatives inhibited the activity of triosephosphate isomerase by making significant interactions with Glu 167, Val 214, 233, Asn 11, Lys 13, Ser 213, Leu 232, Ile 172, Gly 211, 212, 234, 235 and His 92 in the active site of the protein. Furthermore, besides the acceptable pharmacokinetic profiles of the six morpholines, they also showed inhibitory potencies toward four other validated antitrypanosomal drug targets. In view of the foregoing findings, we propose that the six morpholine derivatives be given worthwhile attention to develop them into novel trypanocides.</description><subject>African trypanosomiasis</subject><subject>Bioavailability</subject><subject>Biochemistry</subject><subject>Biomedical and Life Sciences</subject><subject>Biomedicine</subject><subject>Cell Biology</subject><subject>Crystallization</subject><subject>Datasets</subject><subject>Derivatives</subject><subject>Free energy</subject><subject>Mathematical analysis</subject><subject>Molecular docking</subject><subject>Morpholine</subject><subject>Original Research</subject><subject>Pharmacology/Toxicology</subject><subject>Triose-phosphate isomerase</subject><subject>Trypanocides</subject><issn>1054-2523</issn><issn>1554-8120</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2017</creationdate><recordtype>article</recordtype><recordid>eNp1UMtOwzAQtBBIlMIHcLPEObBO7MQ-oopHpUpc4Gy5idO4Su3gTSu1X4-rcODCaWd3Z2a1Q8g9g0cGUD0hAHCeASszVhUqO12QGROCZ5LlcJkwJJyLvLgmN4hbgKICLmZku_QUXe_qQJ0_WBzdxowueBpaugtx6ELvvEVqkPpwsD2te4N43o7xOBgfMOxMnxoX0CY2Dp0ZLXVpbKPBhHzn1m4MEW_JVWt6tHe_dU6-Xl8-F-_Z6uNtuXheZXXByjHLQVnGrZDruhJ5qcpWSdFaW5XQVLKwSkgmlWy5UFCDahhvilI1vFStNJzxYk4eJt8hhu99eklvwz76dFIzKUGm15PPnLCJVceAGG2rh-h2Jh41A32OVE-R6hSpPkeqT0mTTxpMXL-x8Y_zv6IfeKd7UA</recordid><startdate>2017</startdate><enddate>2017</enddate><creator>Ibezim, Akachukwu</creator><creator>Nwodo, Ngozi Justina</creator><creator>Nnaji, Nnaemeka J.N.</creator><creator>Ujam, Oguejiofo T.</creator><creator>Olubiyi, Olujide O.</creator><creator>Mba, Chika J.</creator><general>Springer US</general><general>Springer Nature B.V</general><scope>AAYXX</scope><scope>CITATION</scope><scope>8FD</scope><scope>FR3</scope><scope>M7Z</scope><scope>P64</scope></search><sort><creationdate>2017</creationdate><title>In silico investigation of morpholines as novel class of trypanosomal triosephosphate isomerase inhibitors</title><author>Ibezim, Akachukwu ; Nwodo, Ngozi Justina ; Nnaji, Nnaemeka J.N. ; Ujam, Oguejiofo T. ; Olubiyi, Olujide O. ; Mba, Chika J.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c316t-209e14e58bc752696f985fee760d783e9581898f4590c09d14d369d469f8a4143</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2017</creationdate><topic>African trypanosomiasis</topic><topic>Bioavailability</topic><topic>Biochemistry</topic><topic>Biomedical and Life Sciences</topic><topic>Biomedicine</topic><topic>Cell Biology</topic><topic>Crystallization</topic><topic>Datasets</topic><topic>Derivatives</topic><topic>Free energy</topic><topic>Mathematical analysis</topic><topic>Molecular docking</topic><topic>Morpholine</topic><topic>Original Research</topic><topic>Pharmacology/Toxicology</topic><topic>Triose-phosphate isomerase</topic><topic>Trypanocides</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Ibezim, Akachukwu</creatorcontrib><creatorcontrib>Nwodo, Ngozi Justina</creatorcontrib><creatorcontrib>Nnaji, Nnaemeka J.N.</creatorcontrib><creatorcontrib>Ujam, Oguejiofo T.</creatorcontrib><creatorcontrib>Olubiyi, Olujide O.</creatorcontrib><creatorcontrib>Mba, Chika J.</creatorcontrib><collection>CrossRef</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>Biochemistry Abstracts 1</collection><collection>Biotechnology and BioEngineering Abstracts</collection><jtitle>Medicinal chemistry research</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Ibezim, Akachukwu</au><au>Nwodo, Ngozi Justina</au><au>Nnaji, Nnaemeka J.N.</au><au>Ujam, Oguejiofo T.</au><au>Olubiyi, Olujide O.</au><au>Mba, Chika J.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>In silico investigation of morpholines as novel class of trypanosomal triosephosphate isomerase inhibitors</atitle><jtitle>Medicinal chemistry research</jtitle><stitle>Med Chem Res</stitle><date>2017</date><risdate>2017</risdate><volume>26</volume><issue>1</issue><spage>180</spage><epage>189</epage><pages>180-189</pages><issn>1054-2523</issn><eissn>1554-8120</eissn><abstract>Human African trypanosomiasis, also known as
sleeping sickness
, is caused by the single-celled kinetoplastid parasite
Trypanosoma brucei
transmitted to humans by infected tsetse flies. The disease threatens millions of people. Currently available treatment options are faced with some important challenges. In this work, a total of eighty-seven (87) morpholine derivatives were evaluated for drug-likeness based on Lipinski’s rule of five and their ability to inhibit the activities of trypanosomal triosephosphate isomerase was assessed by molecular docking and calculation of free energy of binding. Analysis of the results revealed that 97.7 % of the dataset complied with Lipinski’s criteria for a molecule to be orally bioavailable. Also, 50.0 % of the studied compounds had a good total polar surface area profile, a parameter which is of great importance for the treatment of stage two
Trypanosoma
infections. Docking studies showed that all the dataset demonstrated affinity for triosephosphate isomerase. Moreover, six morpholines scored higher than the co-crystallized inhibitor of triosephosphate isomerase (2-phosphoglycerate). These derivatives inhibited the activity of triosephosphate isomerase by making significant interactions with Glu 167, Val 214, 233, Asn 11, Lys 13, Ser 213, Leu 232, Ile 172, Gly 211, 212, 234, 235 and His 92 in the active site of the protein. Furthermore, besides the acceptable pharmacokinetic profiles of the six morpholines, they also showed inhibitory potencies toward four other validated antitrypanosomal drug targets. In view of the foregoing findings, we propose that the six morpholine derivatives be given worthwhile attention to develop them into novel trypanocides.</abstract><cop>New York</cop><pub>Springer US</pub><doi>10.1007/s00044-016-1739-z</doi><tpages>10</tpages></addata></record> |
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subjects | African trypanosomiasis Bioavailability Biochemistry Biomedical and Life Sciences Biomedicine Cell Biology Crystallization Datasets Derivatives Free energy Mathematical analysis Molecular docking Morpholine Original Research Pharmacology/Toxicology Triose-phosphate isomerase Trypanocides |
title | In silico investigation of morpholines as novel class of trypanosomal triosephosphate isomerase inhibitors |
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