herbicide binding niche of photosystem II--a model
The Q(B) binding niche of photosystem II is also the binding site for many different herbicides. In order to understand the mode of binding of the herbicides, a 3-dimensional model of the binding niche was constructed. The model was based upon a comparison of the known structure of the Q(B) binding...
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| Veröffentlicht in: | Pesticide Science 1991, Vol.31 (1), p.65-72 |
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| creator | Tietjen, K.G Kluth, J.F Andree, R Haug, M Lindig, M Muller, K.H Wroblowsky, H.J Trebst, A |
| description | The Q(B) binding niche of photosystem II is also the binding site for many different herbicides. In order to understand the mode of binding of the herbicides, a 3-dimensional model of the binding niche was constructed. The model was based upon a comparison of the known structure of the Q(B) binding niche in purple bacteria with sequence and mutant data of the D-1 protein of photosystem II. Plastoquinone builds up hydrogen bonds to phenylalanine 265 backbone amide nitrogen, to serine 264 hydroxyl, and to histidine 215 delta-1 nitrogen. In addition to these hydrogen bond donors and acceptors, herbicides call build up hydrogen bonds to backbone carbonyl of alanine 263 and to serine 268 hydroxyl. This is supported by binding data of inhibitors in Chlamydomonas reinhardtii chloroplasts of wild type and of five D-I protein mutants (Ser264Ala, Ala251 Val, Phe255Tyr, Val2l9Ile, Leu275Phe). |
| doi_str_mv | 10.1002/ps.2780310108 |
| format | Article |
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In order to understand the mode of binding of the herbicides, a 3-dimensional model of the binding niche was constructed. The model was based upon a comparison of the known structure of the Q(B) binding niche in purple bacteria with sequence and mutant data of the D-1 protein of photosystem II. Plastoquinone builds up hydrogen bonds to phenylalanine 265 backbone amide nitrogen, to serine 264 hydroxyl, and to histidine 215 delta-1 nitrogen. In addition to these hydrogen bond donors and acceptors, herbicides call build up hydrogen bonds to backbone carbonyl of alanine 263 and to serine 268 hydroxyl. This is supported by binding data of inhibitors in Chlamydomonas reinhardtii chloroplasts of wild type and of five D-I protein mutants (Ser264Ala, Ala251 Val, Phe255Tyr, Val2l9Ile, Leu275Phe).</description><identifier>ISSN: 0031-613X</identifier><identifier>ISSN: 1526-498X</identifier><identifier>EISSN: 1096-9063</identifier><identifier>DOI: 10.1002/ps.2780310108</identifier><identifier>CODEN: PSSCBG</identifier><language>eng</language><publisher>London: John Wiley & Sons, Ltd</publisher><subject>Agronomy. Soil science and plant productions ; amino acids ; atrazine ; binding sites ; Biological and medical sciences ; Chemical control ; Chlamydomonas reinhardtii ; chloroplasts ; cyanoacrylate ; Fundamental and applied biological sciences. Psychology ; herbicides ; inhibitors ; interactions ; lenacil ; metribuzin ; molecular conformation ; Parasitic plants. Weeds ; photosystem II ; Phytopathology. Animal pests. Plant and forest protection ; proteins ; simulation models ; thiazoles ; triazine herbicides ; Weeds</subject><ispartof>Pesticide Science, 1991, Vol.31 (1), p.65-72</ispartof><rights>Copyright © 1991 John Wiley & Sons, Ltd</rights><rights>1992 INIST-CNRS</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c4048-9495e304aa56b28659ef8a318246d7425eecfeea68312053776ef7add86a00f13</citedby><cites>FETCH-LOGICAL-c4048-9495e304aa56b28659ef8a318246d7425eecfeea68312053776ef7add86a00f13</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1002%2Fps.2780310108$$EPDF$$P50$$Gwiley$$H</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1002%2Fps.2780310108$$EHTML$$P50$$Gwiley$$H</linktohtml><link.rule.ids>309,310,314,776,780,785,786,1411,4010,4036,4037,23909,23910,25118,27846,27900,27901,27902,45550,45551</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=5058851$$DView record in Pascal Francis$$Hfree_for_read</backlink></links><search><creatorcontrib>Tietjen, K.G</creatorcontrib><creatorcontrib>Kluth, J.F</creatorcontrib><creatorcontrib>Andree, R</creatorcontrib><creatorcontrib>Haug, M</creatorcontrib><creatorcontrib>Lindig, M</creatorcontrib><creatorcontrib>Muller, K.H</creatorcontrib><creatorcontrib>Wroblowsky, H.J</creatorcontrib><creatorcontrib>Trebst, A</creatorcontrib><title>herbicide binding niche of photosystem II--a model</title><title>Pesticide Science</title><addtitle>Pestic. Sci</addtitle><description>The Q(B) binding niche of photosystem II is also the binding site for many different herbicides. In order to understand the mode of binding of the herbicides, a 3-dimensional model of the binding niche was constructed. The model was based upon a comparison of the known structure of the Q(B) binding niche in purple bacteria with sequence and mutant data of the D-1 protein of photosystem II. Plastoquinone builds up hydrogen bonds to phenylalanine 265 backbone amide nitrogen, to serine 264 hydroxyl, and to histidine 215 delta-1 nitrogen. In addition to these hydrogen bond donors and acceptors, herbicides call build up hydrogen bonds to backbone carbonyl of alanine 263 and to serine 268 hydroxyl. This is supported by binding data of inhibitors in Chlamydomonas reinhardtii chloroplasts of wild type and of five D-I protein mutants (Ser264Ala, Ala251 Val, Phe255Tyr, Val2l9Ile, Leu275Phe).</description><subject>Agronomy. Soil science and plant productions</subject><subject>amino acids</subject><subject>atrazine</subject><subject>binding sites</subject><subject>Biological and medical sciences</subject><subject>Chemical control</subject><subject>Chlamydomonas reinhardtii</subject><subject>chloroplasts</subject><subject>cyanoacrylate</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>herbicides</subject><subject>inhibitors</subject><subject>interactions</subject><subject>lenacil</subject><subject>metribuzin</subject><subject>molecular conformation</subject><subject>Parasitic plants. Weeds</subject><subject>photosystem II</subject><subject>Phytopathology. Animal pests. 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Soil science and plant productions</topic><topic>amino acids</topic><topic>atrazine</topic><topic>binding sites</topic><topic>Biological and medical sciences</topic><topic>Chemical control</topic><topic>Chlamydomonas reinhardtii</topic><topic>chloroplasts</topic><topic>cyanoacrylate</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>herbicides</topic><topic>inhibitors</topic><topic>interactions</topic><topic>lenacil</topic><topic>metribuzin</topic><topic>molecular conformation</topic><topic>Parasitic plants. Weeds</topic><topic>photosystem II</topic><topic>Phytopathology. Animal pests. Plant and forest protection</topic><topic>proteins</topic><topic>simulation models</topic><topic>thiazoles</topic><topic>triazine herbicides</topic><topic>Weeds</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Tietjen, K.G</creatorcontrib><creatorcontrib>Kluth, J.F</creatorcontrib><creatorcontrib>Andree, R</creatorcontrib><creatorcontrib>Haug, M</creatorcontrib><creatorcontrib>Lindig, M</creatorcontrib><creatorcontrib>Muller, K.H</creatorcontrib><creatorcontrib>Wroblowsky, H.J</creatorcontrib><creatorcontrib>Trebst, A</creatorcontrib><collection>AGRIS</collection><collection>Istex</collection><collection>Pascal-Francis</collection><collection>CrossRef</collection><collection>Periodicals Index Online Segment 50</collection><collection>Periodicals Index Online</collection><collection>Primary Sources Access—Foundation Edition (Plan E) - West</collection><collection>Primary Sources Access (Plan D) - International</collection><collection>Primary Sources Access & Build (Plan A) - MEA</collection><collection>Primary Sources Access—Foundation Edition (Plan E) - Midwest</collection><collection>Primary Sources Access—Foundation Edition (Plan E) - Northeast</collection><collection>Primary Sources Access (Plan D) - Southeast</collection><collection>Primary Sources Access (Plan D) - North Central</collection><collection>Primary Sources Access—Foundation Edition (Plan E) - Southeast</collection><collection>Primary Sources Access (Plan D) - South Central</collection><collection>Primary Sources Access & Build (Plan A) - UK / I</collection><collection>Primary Sources Access (Plan D) - Canada</collection><collection>Primary Sources Access (Plan D) - EMEALA</collection><collection>Primary Sources Access—Foundation Edition (Plan E) - North Central</collection><collection>Primary Sources Access—Foundation Edition (Plan E) - South Central</collection><collection>Primary Sources Access & Build (Plan A) - International</collection><collection>Primary Sources Access—Foundation Edition (Plan E) - International</collection><collection>Primary Sources Access (Plan D) - West</collection><collection>Periodicals Index Online Segments 1-50</collection><collection>Primary Sources Access (Plan D) - APAC</collection><collection>Primary Sources Access (Plan D) - Midwest</collection><collection>Primary Sources Access (Plan D) - MEA</collection><collection>Primary Sources Access—Foundation Edition (Plan E) - Canada</collection><collection>Primary Sources Access—Foundation Edition (Plan E) - UK / I</collection><collection>Primary Sources Access—Foundation Edition (Plan E) - EMEALA</collection><collection>Primary Sources Access & Build (Plan A) - APAC</collection><collection>Primary Sources Access & Build (Plan A) - Canada</collection><collection>Primary Sources Access & Build (Plan A) - West</collection><collection>Primary Sources Access & Build (Plan A) - EMEALA</collection><collection>Primary Sources Access (Plan D) - Northeast</collection><collection>Primary Sources Access & Build (Plan A) - Midwest</collection><collection>Primary Sources Access & Build (Plan A) - North Central</collection><collection>Primary Sources Access & Build (Plan A) - Northeast</collection><collection>Primary Sources Access & Build (Plan A) - South Central</collection><collection>Primary Sources Access & Build (Plan A) - Southeast</collection><collection>Primary Sources Access (Plan D) - UK / I</collection><collection>Primary Sources Access—Foundation Edition (Plan E) - APAC</collection><collection>Primary Sources Access—Foundation Edition (Plan E) - MEA</collection><jtitle>Pesticide Science</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Tietjen, K.G</au><au>Kluth, J.F</au><au>Andree, R</au><au>Haug, M</au><au>Lindig, M</au><au>Muller, K.H</au><au>Wroblowsky, H.J</au><au>Trebst, A</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>herbicide binding niche of photosystem II--a model</atitle><jtitle>Pesticide Science</jtitle><addtitle>Pestic. Sci</addtitle><date>1991</date><risdate>1991</risdate><volume>31</volume><issue>1</issue><spage>65</spage><epage>72</epage><pages>65-72</pages><issn>0031-613X</issn><issn>1526-498X</issn><eissn>1096-9063</eissn><coden>PSSCBG</coden><abstract>The Q(B) binding niche of photosystem II is also the binding site for many different herbicides. In order to understand the mode of binding of the herbicides, a 3-dimensional model of the binding niche was constructed. The model was based upon a comparison of the known structure of the Q(B) binding niche in purple bacteria with sequence and mutant data of the D-1 protein of photosystem II. Plastoquinone builds up hydrogen bonds to phenylalanine 265 backbone amide nitrogen, to serine 264 hydroxyl, and to histidine 215 delta-1 nitrogen. In addition to these hydrogen bond donors and acceptors, herbicides call build up hydrogen bonds to backbone carbonyl of alanine 263 and to serine 268 hydroxyl. This is supported by binding data of inhibitors in Chlamydomonas reinhardtii chloroplasts of wild type and of five D-I protein mutants (Ser264Ala, Ala251 Val, Phe255Tyr, Val2l9Ile, Leu275Phe).</abstract><cop>London</cop><pub>John Wiley & Sons, Ltd</pub><doi>10.1002/ps.2780310108</doi><tpages>8</tpages></addata></record> |
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| identifier | ISSN: 0031-613X |
| ispartof | Pesticide Science, 1991, Vol.31 (1), p.65-72 |
| issn | 0031-613X 1526-498X 1096-9063 |
| language | eng |
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| source | Wiley Online Library Journals Frontfile Complete; Periodicals Index Online |
| subjects | Agronomy. Soil science and plant productions amino acids atrazine binding sites Biological and medical sciences Chemical control Chlamydomonas reinhardtii chloroplasts cyanoacrylate Fundamental and applied biological sciences. Psychology herbicides inhibitors interactions lenacil metribuzin molecular conformation Parasitic plants. Weeds photosystem II Phytopathology. Animal pests. Plant and forest protection proteins simulation models thiazoles triazine herbicides Weeds |
| title | herbicide binding niche of photosystem II--a model |
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