Molecular phylogeny of Zeacarpa (Ralfsiales, Phaeophyceae) proposing a new family Zeacarpaceae and its transfer to Nemodermatales
Zeacarpa leiomorpha is a crustose brown alga endemic to South Africa. The species has been tentatively placed in Ralfsiaceae, but its ordinal assignment has been uncertain. The molecular phylogeny of brown algae based on concatenated DNA sequences of seven chloroplast and mitochondrial gene sequence...
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description | Zeacarpa leiomorpha is a crustose brown alga endemic to South Africa. The species has been tentatively placed in Ralfsiaceae, but its ordinal assignment has been uncertain. The molecular phylogeny of brown algae based on concatenated DNA sequences of seven chloroplast and mitochondrial gene sequences (atpB, psaA, psaB, psbA, psbC, rbcL, and cox1) of taxa covering most of the orders revealed the most related phylogenetic relationship of Z. leiomorpha to Nemoderma tingitanum (Nemodermatales) rather than Ralfsiaceae (Ralfsiales). Morphologically, Zeacarpa and Nemoderma share crustose thallus structure and multiple discoidal chloroplasts without pyrenoids in each cell, however, the formation of lateral unilocular zoidangia in tufts in loose upright filaments in Zeacarpa is distinctive in brown algae. Considering the relatively distant genetic divergence between the two taxa, comparable to that among families or orders in representative brown algae, in addition to the above‐mentioned unique morphological features, we propose the classification of Zeacarpa in a new family Zeacarpaceae in the order Nemodermatales. |
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The species has been tentatively placed in Ralfsiaceae, but its ordinal assignment has been uncertain. The molecular phylogeny of brown algae based on concatenated DNA sequences of seven chloroplast and mitochondrial gene sequences (atpB, psaA, psaB, psbA, psbC, rbcL, and cox1) of taxa covering most of the orders revealed the most related phylogenetic relationship of Z. leiomorpha to Nemoderma tingitanum (Nemodermatales) rather than Ralfsiaceae (Ralfsiales). Morphologically, Zeacarpa and Nemoderma share crustose thallus structure and multiple discoidal chloroplasts without pyrenoids in each cell, however, the formation of lateral unilocular zoidangia in tufts in loose upright filaments in Zeacarpa is distinctive in brown algae. Considering the relatively distant genetic divergence between the two taxa, comparable to that among families or orders in representative brown algae, in addition to the above‐mentioned unique morphological features, we propose the classification of Zeacarpa in a new family Zeacarpaceae in the order Nemodermatales.</description><identifier>ISSN: 0022-3646</identifier><identifier>EISSN: 1529-8817</identifier><identifier>DOI: 10.1111/jpy.12419</identifier><identifier>PMID: 27038002</identifier><language>eng</language><publisher>United States: Blackwell Publishing Ltd</publisher><subject>Chloroplasts - genetics ; Chloroplasts - ultrastructure ; molecular phylogeny ; Nemodermatales ; Phaeophyceae ; Phaeophyceae - classification ; Phaeophyceae - cytology ; Phylogeny ; Sequence Analysis, DNA ; South Africa ; Zeacarpa ; Zeacarpaceae fam. nov</subject><ispartof>Journal of phycology, 2016-08, Vol.52 (4), p.682-686</ispartof><rights>2016 Phycological Society of America</rights><rights>2016 Phycological Society of America.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c5649-c8472a5f6046cbac4b632dd8e99cfd9cfc740c92889f65d801d381d91254c3f73</citedby><cites>FETCH-LOGICAL-c5649-c8472a5f6046cbac4b632dd8e99cfd9cfc740c92889f65d801d381d91254c3f73</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1111%2Fjpy.12419$$EPDF$$P50$$Gwiley$$H</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1111%2Fjpy.12419$$EHTML$$P50$$Gwiley$$H</linktohtml><link.rule.ids>314,777,781,1412,27905,27906,45555,45556</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/27038002$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><contributor>Müller, K.</contributor><contributor>Müller, K.</contributor><creatorcontrib>Kawai, Hiroshi</creatorcontrib><creatorcontrib>Hanyuda, Takeaki</creatorcontrib><creatorcontrib>Bolton, John</creatorcontrib><creatorcontrib>Anderson, Robert</creatorcontrib><title>Molecular phylogeny of Zeacarpa (Ralfsiales, Phaeophyceae) proposing a new family Zeacarpaceae and its transfer to Nemodermatales</title><title>Journal of phycology</title><addtitle>J. Phycol</addtitle><description>Zeacarpa leiomorpha is a crustose brown alga endemic to South Africa. The species has been tentatively placed in Ralfsiaceae, but its ordinal assignment has been uncertain. The molecular phylogeny of brown algae based on concatenated DNA sequences of seven chloroplast and mitochondrial gene sequences (atpB, psaA, psaB, psbA, psbC, rbcL, and cox1) of taxa covering most of the orders revealed the most related phylogenetic relationship of Z. leiomorpha to Nemoderma tingitanum (Nemodermatales) rather than Ralfsiaceae (Ralfsiales). Morphologically, Zeacarpa and Nemoderma share crustose thallus structure and multiple discoidal chloroplasts without pyrenoids in each cell, however, the formation of lateral unilocular zoidangia in tufts in loose upright filaments in Zeacarpa is distinctive in brown algae. Considering the relatively distant genetic divergence between the two taxa, comparable to that among families or orders in representative brown algae, in addition to the above‐mentioned unique morphological features, we propose the classification of Zeacarpa in a new family Zeacarpaceae in the order Nemodermatales.</description><subject>Chloroplasts - genetics</subject><subject>Chloroplasts - ultrastructure</subject><subject>molecular phylogeny</subject><subject>Nemodermatales</subject><subject>Phaeophyceae</subject><subject>Phaeophyceae - classification</subject><subject>Phaeophyceae - cytology</subject><subject>Phylogeny</subject><subject>Sequence Analysis, DNA</subject><subject>South Africa</subject><subject>Zeacarpa</subject><subject>Zeacarpaceae fam. nov</subject><issn>0022-3646</issn><issn>1529-8817</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2016</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNp1kEFvFCEYhonR2G314B8wJF5s4rTAMAwcTaNbta4brbF6ISx8tLPODCPMps7Rfy7rtnuT5AuH73kfyIvQM0pOaD6n62E6oYxT9QDNaMVUISWtH6IZIYwVpeDiAB2mtCaE1KKij9EBq0kp83aG_nwMLdhNayIebqY2XEM_4eDxDzDWxMHgl59N61NjWkiv8PLGQMicBQPHeIhhCKnpr7HBPdxib7qmnfbRLYRN73AzJjxG0ycPEY8BL6ALDmJnxq31CXrkTZvg6d19hL6-fXN5dl5cfJq_O3t9UdhKcFVYyWtmKi8IF3ZlLF-JkjknQSnrXR5bc2IVk1J5UTlJqCsldYqyitvS1-URerHz5m__2kAa9TpsYp-f1FRSqpgSnGfqeEfZGFKK4PUQm87ESVOit2XrXLb-V3Zmn98ZN6sO3J68bzcDpzvgtmlh-r9Jv19-v1cWu0STRvi9T5j4U4u6rCv9bTHXl8urL_OrBdUfyr9JH5ms</recordid><startdate>201608</startdate><enddate>201608</enddate><creator>Kawai, Hiroshi</creator><creator>Hanyuda, Takeaki</creator><creator>Bolton, John</creator><creator>Anderson, Robert</creator><general>Blackwell Publishing Ltd</general><general>Wiley Subscription Services, Inc</general><scope>BSCLL</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7TN</scope><scope>F1W</scope><scope>H95</scope><scope>L.G</scope><scope>M7N</scope></search><sort><creationdate>201608</creationdate><title>Molecular phylogeny of Zeacarpa (Ralfsiales, Phaeophyceae) proposing a new family Zeacarpaceae and its transfer to Nemodermatales</title><author>Kawai, Hiroshi ; Hanyuda, Takeaki ; Bolton, John ; Anderson, Robert</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c5649-c8472a5f6046cbac4b632dd8e99cfd9cfc740c92889f65d801d381d91254c3f73</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2016</creationdate><topic>Chloroplasts - genetics</topic><topic>Chloroplasts - ultrastructure</topic><topic>molecular phylogeny</topic><topic>Nemodermatales</topic><topic>Phaeophyceae</topic><topic>Phaeophyceae - classification</topic><topic>Phaeophyceae - cytology</topic><topic>Phylogeny</topic><topic>Sequence Analysis, DNA</topic><topic>South Africa</topic><topic>Zeacarpa</topic><topic>Zeacarpaceae fam. nov</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Kawai, Hiroshi</creatorcontrib><creatorcontrib>Hanyuda, Takeaki</creatorcontrib><creatorcontrib>Bolton, John</creatorcontrib><creatorcontrib>Anderson, Robert</creatorcontrib><collection>Istex</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Oceanic Abstracts</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 1: Biological Sciences & Living Resources</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Professional</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><jtitle>Journal of phycology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Kawai, Hiroshi</au><au>Hanyuda, Takeaki</au><au>Bolton, John</au><au>Anderson, Robert</au><au>Müller, K.</au><au>Müller, K.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Molecular phylogeny of Zeacarpa (Ralfsiales, Phaeophyceae) proposing a new family Zeacarpaceae and its transfer to Nemodermatales</atitle><jtitle>Journal of phycology</jtitle><addtitle>J. Phycol</addtitle><date>2016-08</date><risdate>2016</risdate><volume>52</volume><issue>4</issue><spage>682</spage><epage>686</epage><pages>682-686</pages><issn>0022-3646</issn><eissn>1529-8817</eissn><abstract>Zeacarpa leiomorpha is a crustose brown alga endemic to South Africa. The species has been tentatively placed in Ralfsiaceae, but its ordinal assignment has been uncertain. The molecular phylogeny of brown algae based on concatenated DNA sequences of seven chloroplast and mitochondrial gene sequences (atpB, psaA, psaB, psbA, psbC, rbcL, and cox1) of taxa covering most of the orders revealed the most related phylogenetic relationship of Z. leiomorpha to Nemoderma tingitanum (Nemodermatales) rather than Ralfsiaceae (Ralfsiales). Morphologically, Zeacarpa and Nemoderma share crustose thallus structure and multiple discoidal chloroplasts without pyrenoids in each cell, however, the formation of lateral unilocular zoidangia in tufts in loose upright filaments in Zeacarpa is distinctive in brown algae. Considering the relatively distant genetic divergence between the two taxa, comparable to that among families or orders in representative brown algae, in addition to the above‐mentioned unique morphological features, we propose the classification of Zeacarpa in a new family Zeacarpaceae in the order Nemodermatales.</abstract><cop>United States</cop><pub>Blackwell Publishing Ltd</pub><pmid>27038002</pmid><doi>10.1111/jpy.12419</doi><tpages>5</tpages></addata></record> |
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subjects | Chloroplasts - genetics Chloroplasts - ultrastructure molecular phylogeny Nemodermatales Phaeophyceae Phaeophyceae - classification Phaeophyceae - cytology Phylogeny Sequence Analysis, DNA South Africa Zeacarpa Zeacarpaceae fam. nov |
title | Molecular phylogeny of Zeacarpa (Ralfsiales, Phaeophyceae) proposing a new family Zeacarpaceae and its transfer to Nemodermatales |
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