Structures of Iridoid Synthase from Cantharanthus roseus with Bound NAD+, NADPH, or NAD+/10-Oxogeranial: Reaction Mechanisms

Structures of the iridoid synthase nepetalactol synthase in the presence of NAD+, NADPH or NAD+/10‐oxogeranial were solved. The 10‐oxogeranial substrate binds in a transoid‐O1‐C3 conformation and can be reduced by hydride addition to form the byproduct S‐10‐oxo‐citronellal. Tyr178 Oζ is positioned 2...

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Veröffentlicht in:Angewandte Chemie 2015-12, Vol.127 (51), p.15698-15702
Hauptverfasser: Hu, Yumei, Liu, Weidong, Malwal, Satish R., Zheng, Yingying, Feng, Xinxin, Ko, Tzu-Ping, Chen, Chun-Chi, Xu, Zhongxia, Liu, Meixia, Han, Xu, Gao, Jian, Oldfield, Eric, Guo, Rey-Ting
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container_issue 51
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container_title Angewandte Chemie
container_volume 127
creator Hu, Yumei
Liu, Weidong
Malwal, Satish R.
Zheng, Yingying
Feng, Xinxin
Ko, Tzu-Ping
Chen, Chun-Chi
Xu, Zhongxia
Liu, Meixia
Han, Xu
Gao, Jian
Oldfield, Eric
Guo, Rey-Ting
description Structures of the iridoid synthase nepetalactol synthase in the presence of NAD+, NADPH or NAD+/10‐oxogeranial were solved. The 10‐oxogeranial substrate binds in a transoid‐O1‐C3 conformation and can be reduced by hydride addition to form the byproduct S‐10‐oxo‐citronellal. Tyr178 Oζ is positioned 2.5 Å from the substrate O1 and provides the second proton required for reaction. Nepetalactol product formation requires rotation about C1–C2 to form the cisoid isomer, leading to formation of the cis‐enolate, together with rotation about C4–C5, which enables cyclization and lactol production. The structure is similar to that of progesterone‐5β‐reductase, with almost identical positioning of NADP, Lys146(147), Tyr178(179), and F342(343), but only Tyr178 and Phe342 appear to be essential for activity. The transoid 10‐oxogeranial structure also serves as a model for β‐face hydride attack in progesterone 5β‐reductases and is of general interest in the context of asymmetric synthesis. Enzym hat den Dreh raus: Röntgenstrukturen der Iridoid‐Synthase offenbaren die Bindung eines transoiden Substrats, das als Modell für den Katalysemechanismus der Progesteron‐Reduktase dient. Die Bildung des Iridoidprodukts erfordert eine Drehung um C1‐C2, um das cisoide Isomer zu bilden, sowie eine Drehung um C4‐C5, um die Cyclisierung und Lactolbildung zu ermöglichen.
doi_str_mv 10.1002/ange.201508310
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The 10‐oxogeranial substrate binds in a transoid‐O1‐C3 conformation and can be reduced by hydride addition to form the byproduct S‐10‐oxo‐citronellal. Tyr178 Oζ is positioned 2.5 Å from the substrate O1 and provides the second proton required for reaction. Nepetalactol product formation requires rotation about C1–C2 to form the cisoid isomer, leading to formation of the cis‐enolate, together with rotation about C4–C5, which enables cyclization and lactol production. The structure is similar to that of progesterone‐5β‐reductase, with almost identical positioning of NADP, Lys146(147), Tyr178(179), and F342(343), but only Tyr178 and Phe342 appear to be essential for activity. The transoid 10‐oxogeranial structure also serves as a model for β‐face hydride attack in progesterone 5β‐reductases and is of general interest in the context of asymmetric synthesis. Enzym hat den Dreh raus: Röntgenstrukturen der Iridoid‐Synthase offenbaren die Bindung eines transoiden Substrats, das als Modell für den Katalysemechanismus der Progesteron‐Reduktase dient. Die Bildung des Iridoidprodukts erfordert eine Drehung um C1‐C2, um das cisoide Isomer zu bilden, sowie eine Drehung um C4‐C5, um die Cyclisierung und Lactolbildung zu ermöglichen.</description><identifier>ISSN: 0044-8249</identifier><identifier>EISSN: 1521-3757</identifier><identifier>DOI: 10.1002/ange.201508310</identifier><language>eng ; ger</language><publisher>Weinheim: WILEY-VCH Verlag</publisher><subject>Biosynthese ; Chemistry ; Enzymmechanismen ; Monoterpene ; Naturstoffe ; Röntgenkristallographie</subject><ispartof>Angewandte Chemie, 2015-12, Vol.127 (51), p.15698-15702</ispartof><rights>2015 WILEY‐VCH Verlag GmbH &amp; Co. KGaA, Weinheim</rights><rights>2015 WILEY-VCH Verlag GmbH &amp; Co. 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Chem</addtitle><description>Structures of the iridoid synthase nepetalactol synthase in the presence of NAD+, NADPH or NAD+/10‐oxogeranial were solved. The 10‐oxogeranial substrate binds in a transoid‐O1‐C3 conformation and can be reduced by hydride addition to form the byproduct S‐10‐oxo‐citronellal. Tyr178 Oζ is positioned 2.5 Å from the substrate O1 and provides the second proton required for reaction. Nepetalactol product formation requires rotation about C1–C2 to form the cisoid isomer, leading to formation of the cis‐enolate, together with rotation about C4–C5, which enables cyclization and lactol production. The structure is similar to that of progesterone‐5β‐reductase, with almost identical positioning of NADP, Lys146(147), Tyr178(179), and F342(343), but only Tyr178 and Phe342 appear to be essential for activity. The transoid 10‐oxogeranial structure also serves as a model for β‐face hydride attack in progesterone 5β‐reductases and is of general interest in the context of asymmetric synthesis. Enzym hat den Dreh raus: Röntgenstrukturen der Iridoid‐Synthase offenbaren die Bindung eines transoiden Substrats, das als Modell für den Katalysemechanismus der Progesteron‐Reduktase dient. Die Bildung des Iridoidprodukts erfordert eine Drehung um C1‐C2, um das cisoide Isomer zu bilden, sowie eine Drehung um C4‐C5, um die Cyclisierung und Lactolbildung zu ermöglichen.</description><subject>Biosynthese</subject><subject>Chemistry</subject><subject>Enzymmechanismen</subject><subject>Monoterpene</subject><subject>Naturstoffe</subject><subject>Röntgenkristallographie</subject><issn>0044-8249</issn><issn>1521-3757</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2015</creationdate><recordtype>article</recordtype><recordid>eNqFkd9PwjAQxxujiYi--tzERxm03a_ON0QEEhxGVB6brutgCCu2W4DEP95ODPHNXHKXu3w_1_ZbAK4xamOESIcXc9kmCPuIuhidgAb2CXbc0A9PQQMhz3Mo8aJzcGHMEiEUkDBqgK9pqStRVloaqDI40nmq8hRO90W54EbCTKs17PG603WuDNTKSFu2ebmA96oqUhh3H25bdX4etqDSP30HI2eyU3NpsZyv7uCL5KLMVQGfpFjYmVmbS3CW8ZWRV7-1Cd4e-6-9oTOeDEa97tgRxF7UybxQupnHwwhj4ntRGngRTjCNRGinVPqUZ0KkNkKU4IQmEnFBKcqIm9iQbhPcHPZutPqspCnZUlW6sEcybO2xVkQutqr2QSXsC42WGdvofM31nmHEaodZ7TA7OmyB6ABs85Xc_6Nm3XjQ_8s6BzY3pdwdWa4_WBDaP2OzeMBocE9m73GPue4376aOKg</recordid><startdate>20151214</startdate><enddate>20151214</enddate><creator>Hu, Yumei</creator><creator>Liu, Weidong</creator><creator>Malwal, Satish R.</creator><creator>Zheng, Yingying</creator><creator>Feng, Xinxin</creator><creator>Ko, Tzu-Ping</creator><creator>Chen, Chun-Chi</creator><creator>Xu, Zhongxia</creator><creator>Liu, Meixia</creator><creator>Han, Xu</creator><creator>Gao, Jian</creator><creator>Oldfield, Eric</creator><creator>Guo, Rey-Ting</creator><general>WILEY-VCH Verlag</general><general>WILEY‐VCH Verlag</general><general>Wiley Subscription Services, Inc</general><scope>BSCLL</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7SR</scope><scope>7U5</scope><scope>8BQ</scope><scope>8FD</scope><scope>JG9</scope><scope>L7M</scope></search><sort><creationdate>20151214</creationdate><title>Structures of Iridoid Synthase from Cantharanthus roseus with Bound NAD+, NADPH, or NAD+/10-Oxogeranial: Reaction Mechanisms</title><author>Hu, Yumei ; Liu, Weidong ; Malwal, Satish R. ; Zheng, Yingying ; Feng, Xinxin ; Ko, Tzu-Ping ; Chen, Chun-Chi ; Xu, Zhongxia ; Liu, Meixia ; Han, Xu ; Gao, Jian ; Oldfield, Eric ; Guo, Rey-Ting</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c2000-f47e3f4a79112549d6491b189c7f4a8e58afccdcdc70b1b8be0ac880f23b3b3e3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng ; ger</language><creationdate>2015</creationdate><topic>Biosynthese</topic><topic>Chemistry</topic><topic>Enzymmechanismen</topic><topic>Monoterpene</topic><topic>Naturstoffe</topic><topic>Röntgenkristallographie</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Hu, Yumei</creatorcontrib><creatorcontrib>Liu, Weidong</creatorcontrib><creatorcontrib>Malwal, Satish R.</creatorcontrib><creatorcontrib>Zheng, Yingying</creatorcontrib><creatorcontrib>Feng, Xinxin</creatorcontrib><creatorcontrib>Ko, Tzu-Ping</creatorcontrib><creatorcontrib>Chen, Chun-Chi</creatorcontrib><creatorcontrib>Xu, Zhongxia</creatorcontrib><creatorcontrib>Liu, Meixia</creatorcontrib><creatorcontrib>Han, Xu</creatorcontrib><creatorcontrib>Gao, Jian</creatorcontrib><creatorcontrib>Oldfield, Eric</creatorcontrib><creatorcontrib>Guo, Rey-Ting</creatorcontrib><collection>Istex</collection><collection>CrossRef</collection><collection>Engineered Materials Abstracts</collection><collection>Solid State and Superconductivity Abstracts</collection><collection>METADEX</collection><collection>Technology Research Database</collection><collection>Materials Research Database</collection><collection>Advanced Technologies Database with Aerospace</collection><jtitle>Angewandte Chemie</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Hu, Yumei</au><au>Liu, Weidong</au><au>Malwal, Satish R.</au><au>Zheng, Yingying</au><au>Feng, Xinxin</au><au>Ko, Tzu-Ping</au><au>Chen, Chun-Chi</au><au>Xu, Zhongxia</au><au>Liu, Meixia</au><au>Han, Xu</au><au>Gao, Jian</au><au>Oldfield, Eric</au><au>Guo, Rey-Ting</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Structures of Iridoid Synthase from Cantharanthus roseus with Bound NAD+, NADPH, or NAD+/10-Oxogeranial: Reaction Mechanisms</atitle><jtitle>Angewandte Chemie</jtitle><addtitle>Angew. Chem</addtitle><date>2015-12-14</date><risdate>2015</risdate><volume>127</volume><issue>51</issue><spage>15698</spage><epage>15702</epage><pages>15698-15702</pages><issn>0044-8249</issn><eissn>1521-3757</eissn><abstract>Structures of the iridoid synthase nepetalactol synthase in the presence of NAD+, NADPH or NAD+/10‐oxogeranial were solved. The 10‐oxogeranial substrate binds in a transoid‐O1‐C3 conformation and can be reduced by hydride addition to form the byproduct S‐10‐oxo‐citronellal. Tyr178 Oζ is positioned 2.5 Å from the substrate O1 and provides the second proton required for reaction. Nepetalactol product formation requires rotation about C1–C2 to form the cisoid isomer, leading to formation of the cis‐enolate, together with rotation about C4–C5, which enables cyclization and lactol production. The structure is similar to that of progesterone‐5β‐reductase, with almost identical positioning of NADP, Lys146(147), Tyr178(179), and F342(343), but only Tyr178 and Phe342 appear to be essential for activity. The transoid 10‐oxogeranial structure also serves as a model for β‐face hydride attack in progesterone 5β‐reductases and is of general interest in the context of asymmetric synthesis. Enzym hat den Dreh raus: Röntgenstrukturen der Iridoid‐Synthase offenbaren die Bindung eines transoiden Substrats, das als Modell für den Katalysemechanismus der Progesteron‐Reduktase dient. Die Bildung des Iridoidprodukts erfordert eine Drehung um C1‐C2, um das cisoide Isomer zu bilden, sowie eine Drehung um C4‐C5, um die Cyclisierung und Lactolbildung zu ermöglichen.</abstract><cop>Weinheim</cop><pub>WILEY-VCH Verlag</pub><doi>10.1002/ange.201508310</doi><tpages>5</tpages></addata></record>
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subjects Biosynthese
Chemistry
Enzymmechanismen
Monoterpene
Naturstoffe
Röntgenkristallographie
title Structures of Iridoid Synthase from Cantharanthus roseus with Bound NAD+, NADPH, or NAD+/10-Oxogeranial: Reaction Mechanisms
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