Investigation of resolution effects using a specialized diffusion tensor phantom
Purpose The clinical potential of the diffusion imaging‐based analysis of fine brain structures such as fornix or cingulum is high due to the central role of these structures in psychiatric diseases. However, the quantification of diffusion parameters in fine structures is especially prone to partia...
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Veröffentlicht in: | Magnetic resonance in medicine 2014-03, Vol.71 (3), p.1108-1116 |
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creator | Bach, Michael Fritzsche, Klaus H. Stieltjes, Bram Laun, Frederik B. |
description | Purpose
The clinical potential of the diffusion imaging‐based analysis of fine brain structures such as fornix or cingulum is high due to the central role of these structures in psychiatric diseases. However, the quantification of diffusion parameters in fine structures is especially prone to partial volume effects (PVEs).
Methods
In this study, a phantom for the investigation of PVEs and their influence on diffusion parameters in fine structures of different diameter is presented. The phantom is produced by winding wet polyester fibers onto a spindle. The resulting fiber strands have well defined square cross‐sections of 1–25 mm2 and provide a homogeneous and high fractional anisotropy (FA ≈ 0.9).
Results
Several PVEs are demonstrated and analyzed. It is shown that inferred results such as the fiber geometry and diffusion parameters strongly depend on the relative position of the structure of interest to the voxel‐grid. Several implications of PVEs on post‐processing methods such as Tract‐based Spatial Statistics and fiber tractography are demonstrated.
Conclusion
These results show that the handling of PVEs in common post‐processing tasks can be problematic, and that the presented phantom provides a valuable tool for the improvement and evaluation of these effects. Magn Reson Med 71:1108–1116, 2014. © 2013 Wiley Periodicals, Inc. |
doi_str_mv | 10.1002/mrm.24774 |
format | Article |
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The clinical potential of the diffusion imaging‐based analysis of fine brain structures such as fornix or cingulum is high due to the central role of these structures in psychiatric diseases. However, the quantification of diffusion parameters in fine structures is especially prone to partial volume effects (PVEs).
Methods
In this study, a phantom for the investigation of PVEs and their influence on diffusion parameters in fine structures of different diameter is presented. The phantom is produced by winding wet polyester fibers onto a spindle. The resulting fiber strands have well defined square cross‐sections of 1–25 mm2 and provide a homogeneous and high fractional anisotropy (FA ≈ 0.9).
Results
Several PVEs are demonstrated and analyzed. It is shown that inferred results such as the fiber geometry and diffusion parameters strongly depend on the relative position of the structure of interest to the voxel‐grid. Several implications of PVEs on post‐processing methods such as Tract‐based Spatial Statistics and fiber tractography are demonstrated.
Conclusion
These results show that the handling of PVEs in common post‐processing tasks can be problematic, and that the presented phantom provides a valuable tool for the improvement and evaluation of these effects. Magn Reson Med 71:1108–1116, 2014. © 2013 Wiley Periodicals, Inc.</description><identifier>ISSN: 0740-3194</identifier><identifier>EISSN: 1522-2594</identifier><identifier>DOI: 10.1002/mrm.24774</identifier><identifier>PMID: 23657980</identifier><identifier>CODEN: MRMEEN</identifier><language>eng</language><publisher>United States: Blackwell Publishing Ltd</publisher><subject>Algorithms ; Brain - cytology ; Diffusion Tensor Imaging - instrumentation ; Diffusion Tensor Imaging - methods ; DTI ; fiber tracking ; Humans ; Image Enhancement - methods ; Image Interpretation, Computer-Assisted - methods ; Nerve Fibers, Myelinated - ultrastructure ; partial volume effects ; Phantoms, Imaging ; Reproducibility of Results ; resolution phantom ; Sensitivity and Specificity ; TBSS</subject><ispartof>Magnetic resonance in medicine, 2014-03, Vol.71 (3), p.1108-1116</ispartof><rights>Copyright © 2013 Wiley Periodicals, Inc.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c3584-4f9abf78c4b687b60e2a5054f5ec5b631a1127ad0347aec7c032a0d07bab6bf53</citedby><cites>FETCH-LOGICAL-c3584-4f9abf78c4b687b60e2a5054f5ec5b631a1127ad0347aec7c032a0d07bab6bf53</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1002%2Fmrm.24774$$EPDF$$P50$$Gwiley$$H</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1002%2Fmrm.24774$$EHTML$$P50$$Gwiley$$H</linktohtml><link.rule.ids>314,780,784,1416,1432,27923,27924,45573,45574,46408,46832</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/23657980$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Bach, Michael</creatorcontrib><creatorcontrib>Fritzsche, Klaus H.</creatorcontrib><creatorcontrib>Stieltjes, Bram</creatorcontrib><creatorcontrib>Laun, Frederik B.</creatorcontrib><title>Investigation of resolution effects using a specialized diffusion tensor phantom</title><title>Magnetic resonance in medicine</title><addtitle>Magn. Reson. Med</addtitle><description>Purpose
The clinical potential of the diffusion imaging‐based analysis of fine brain structures such as fornix or cingulum is high due to the central role of these structures in psychiatric diseases. However, the quantification of diffusion parameters in fine structures is especially prone to partial volume effects (PVEs).
Methods
In this study, a phantom for the investigation of PVEs and their influence on diffusion parameters in fine structures of different diameter is presented. The phantom is produced by winding wet polyester fibers onto a spindle. The resulting fiber strands have well defined square cross‐sections of 1–25 mm2 and provide a homogeneous and high fractional anisotropy (FA ≈ 0.9).
Results
Several PVEs are demonstrated and analyzed. It is shown that inferred results such as the fiber geometry and diffusion parameters strongly depend on the relative position of the structure of interest to the voxel‐grid. Several implications of PVEs on post‐processing methods such as Tract‐based Spatial Statistics and fiber tractography are demonstrated.
Conclusion
These results show that the handling of PVEs in common post‐processing tasks can be problematic, and that the presented phantom provides a valuable tool for the improvement and evaluation of these effects. Magn Reson Med 71:1108–1116, 2014. © 2013 Wiley Periodicals, Inc.</description><subject>Algorithms</subject><subject>Brain - cytology</subject><subject>Diffusion Tensor Imaging - instrumentation</subject><subject>Diffusion Tensor Imaging - methods</subject><subject>DTI</subject><subject>fiber tracking</subject><subject>Humans</subject><subject>Image Enhancement - methods</subject><subject>Image Interpretation, Computer-Assisted - methods</subject><subject>Nerve Fibers, Myelinated - ultrastructure</subject><subject>partial volume effects</subject><subject>Phantoms, Imaging</subject><subject>Reproducibility of Results</subject><subject>resolution phantom</subject><subject>Sensitivity and Specificity</subject><subject>TBSS</subject><issn>0740-3194</issn><issn>1522-2594</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2014</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNp1kMtOwzAQRS0EglJY8AMoEisWoeNXnCwR0ILUFsRDLC0nsYshL-wEKF9PoIUdq9GMzpzRXIQOMJxgADIqXXlCmBBsAw0wJyQkPGGbaACCQUhxwnbQrvfPAJAkgm2jHUIjLpIYBujmqnrTvrUL1dq6CmoTOO3rovvptDE6a33QeVstAhX4RmdWFfZT50FujennPdXqytcuaJ5U1dblHtoyqvB6f12H6GF8cX92GU6vJ1dnp9MwozxmITOJSo2IM5ZGsUgj0ERx4MxwnfE0olhhTITKgTKhdCYyoERBDiJVaZQaTofoaOVtXP3a9S_I57pzVX9SYg4QE0oI6anjFZW52nunjWycLZVbSgzyOzvZZyd_suvZw7WxS0ud_5G_YfXAaAW820Iv_zfJ2e3sVxmuNqxv9cffhnIvMhJUcPk4n0jG7-bnj2Isx_QLpbCImA</recordid><startdate>201403</startdate><enddate>201403</enddate><creator>Bach, Michael</creator><creator>Fritzsche, Klaus H.</creator><creator>Stieltjes, Bram</creator><creator>Laun, Frederik B.</creator><general>Blackwell Publishing Ltd</general><general>Wiley Subscription Services, Inc</general><scope>BSCLL</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>8FD</scope><scope>FR3</scope><scope>K9.</scope><scope>M7Z</scope><scope>P64</scope></search><sort><creationdate>201403</creationdate><title>Investigation of resolution effects using a specialized diffusion tensor phantom</title><author>Bach, Michael ; Fritzsche, Klaus H. ; Stieltjes, Bram ; Laun, Frederik B.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c3584-4f9abf78c4b687b60e2a5054f5ec5b631a1127ad0347aec7c032a0d07bab6bf53</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2014</creationdate><topic>Algorithms</topic><topic>Brain - cytology</topic><topic>Diffusion Tensor Imaging - instrumentation</topic><topic>Diffusion Tensor Imaging - methods</topic><topic>DTI</topic><topic>fiber tracking</topic><topic>Humans</topic><topic>Image Enhancement - methods</topic><topic>Image Interpretation, Computer-Assisted - methods</topic><topic>Nerve Fibers, Myelinated - ultrastructure</topic><topic>partial volume effects</topic><topic>Phantoms, Imaging</topic><topic>Reproducibility of Results</topic><topic>resolution phantom</topic><topic>Sensitivity and Specificity</topic><topic>TBSS</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Bach, Michael</creatorcontrib><creatorcontrib>Fritzsche, Klaus H.</creatorcontrib><creatorcontrib>Stieltjes, Bram</creatorcontrib><creatorcontrib>Laun, Frederik B.</creatorcontrib><collection>Istex</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Biochemistry Abstracts 1</collection><collection>Biotechnology and BioEngineering Abstracts</collection><jtitle>Magnetic resonance in medicine</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Bach, Michael</au><au>Fritzsche, Klaus H.</au><au>Stieltjes, Bram</au><au>Laun, Frederik B.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Investigation of resolution effects using a specialized diffusion tensor phantom</atitle><jtitle>Magnetic resonance in medicine</jtitle><addtitle>Magn. Reson. Med</addtitle><date>2014-03</date><risdate>2014</risdate><volume>71</volume><issue>3</issue><spage>1108</spage><epage>1116</epage><pages>1108-1116</pages><issn>0740-3194</issn><eissn>1522-2594</eissn><coden>MRMEEN</coden><abstract>Purpose
The clinical potential of the diffusion imaging‐based analysis of fine brain structures such as fornix or cingulum is high due to the central role of these structures in psychiatric diseases. However, the quantification of diffusion parameters in fine structures is especially prone to partial volume effects (PVEs).
Methods
In this study, a phantom for the investigation of PVEs and their influence on diffusion parameters in fine structures of different diameter is presented. The phantom is produced by winding wet polyester fibers onto a spindle. The resulting fiber strands have well defined square cross‐sections of 1–25 mm2 and provide a homogeneous and high fractional anisotropy (FA ≈ 0.9).
Results
Several PVEs are demonstrated and analyzed. It is shown that inferred results such as the fiber geometry and diffusion parameters strongly depend on the relative position of the structure of interest to the voxel‐grid. Several implications of PVEs on post‐processing methods such as Tract‐based Spatial Statistics and fiber tractography are demonstrated.
Conclusion
These results show that the handling of PVEs in common post‐processing tasks can be problematic, and that the presented phantom provides a valuable tool for the improvement and evaluation of these effects. Magn Reson Med 71:1108–1116, 2014. © 2013 Wiley Periodicals, Inc.</abstract><cop>United States</cop><pub>Blackwell Publishing Ltd</pub><pmid>23657980</pmid><doi>10.1002/mrm.24774</doi><tpages>9</tpages></addata></record> |
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subjects | Algorithms Brain - cytology Diffusion Tensor Imaging - instrumentation Diffusion Tensor Imaging - methods DTI fiber tracking Humans Image Enhancement - methods Image Interpretation, Computer-Assisted - methods Nerve Fibers, Myelinated - ultrastructure partial volume effects Phantoms, Imaging Reproducibility of Results resolution phantom Sensitivity and Specificity TBSS |
title | Investigation of resolution effects using a specialized diffusion tensor phantom |
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