A comparative proteomics analysis of soybean leaves under biotic and abiotic treatments
A comparative proteomic study was made to explore the molecular mechanisms, which underlie soybean root and stem defense response caused by the oomycete Phytophthora sojae strain P6497. Soybean ( Glycine max cv. Xinyixiaoheidou) seedling roots were incubated in salicylic acid, methyl jasmonate, 1-am...
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| Veröffentlicht in: | Molecular biology reports 2013-02, Vol.40 (2), p.1553-1562 |
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| creator | Zhao, Jinming Zhang, Yumei Bian, Xiaochun Lei, Jun Sun, Jutao Guo, Na Gai, Junyi Xing, Han |
| description | A comparative proteomic study was made to explore the molecular mechanisms, which underlie soybean root and stem defense response caused by the oomycete
Phytophthora sojae
strain P6497. Soybean (
Glycine max
cv. Xinyixiaoheidou) seedling roots were incubated in salicylic acid, methyl jasmonate, 1-amino cyclopropane-1-carboxylic acid, hydrogen peroxide, sodium nitroprusside, vitamin B
1
and
P. sojae
zoosperm in order to determine whether the corresponding leaves play a role in the defense response at the proteomic level. The results showed that the proteome of leaves had no significant differences. Of the 21 identified proteins identified in the study, 62 % were involved in predominately in energy functions. Those involved in protein synthesis, secondary metabolism and metabolism categories followed in abundance, where proteins involved as transporters and in transcription were the least and represented only 5 %. Those related to energy were shown to be involved in photosynthesis and photorespiration activities. The present study provides important information with regards to proteomic methods aimed to study protein regulations of the soybean–
P. sojae
pathosystem, especially in terms of host resistance to this pathogen. |
| doi_str_mv | 10.1007/s11033-012-2203-x |
| format | Article |
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Phytophthora sojae
strain P6497. Soybean (
Glycine max
cv. Xinyixiaoheidou) seedling roots were incubated in salicylic acid, methyl jasmonate, 1-amino cyclopropane-1-carboxylic acid, hydrogen peroxide, sodium nitroprusside, vitamin B
1
and
P. sojae
zoosperm in order to determine whether the corresponding leaves play a role in the defense response at the proteomic level. The results showed that the proteome of leaves had no significant differences. Of the 21 identified proteins identified in the study, 62 % were involved in predominately in energy functions. Those involved in protein synthesis, secondary metabolism and metabolism categories followed in abundance, where proteins involved as transporters and in transcription were the least and represented only 5 %. Those related to energy were shown to be involved in photosynthesis and photorespiration activities. The present study provides important information with regards to proteomic methods aimed to study protein regulations of the soybean–
P. sojae
pathosystem, especially in terms of host resistance to this pathogen.</description><identifier>ISSN: 0301-4851</identifier><identifier>EISSN: 1573-4978</identifier><identifier>DOI: 10.1007/s11033-012-2203-x</identifier><identifier>PMID: 23100066</identifier><language>eng</language><publisher>Dordrecht: Springer Netherlands</publisher><subject>Abiotic stress ; Acetates - pharmacology ; Amino Acid Sequence ; Animal Anatomy ; Animal Biochemistry ; Biomedical and Life Sciences ; Cyclopentanes - pharmacology ; Glycine max - drug effects ; Glycine max - metabolism ; Glycine max - microbiology ; Histology ; Host-Pathogen Interactions ; Leaves ; Life Sciences ; Molecular biology ; Molecular Sequence Annotation ; Molecular Sequence Data ; Morphology ; Oxylipins - pharmacology ; Peptide Fragments - chemistry ; Phytophthora - physiology ; Plant Diseases - microbiology ; Plant Growth Regulators - pharmacology ; Plant Immunity ; Plant Leaves - metabolism ; Plant Leaves - microbiology ; Plant Proteins - chemistry ; Plant Proteins - metabolism ; Plant Roots - drug effects ; Plant Roots - metabolism ; Proteome - chemistry ; Proteome - metabolism ; Proteomics ; Soybeans ; Stress, Physiological</subject><ispartof>Molecular biology reports, 2013-02, Vol.40 (2), p.1553-1562</ispartof><rights>Springer Science+Business Media Dordrecht 2012</rights><rights>Springer Science+Business Media Dordrecht 2013</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c438t-112c30a75422c2675685abb871f757000a22822e04ddc586c38da803e64d12be3</citedby><cites>FETCH-LOGICAL-c438t-112c30a75422c2675685abb871f757000a22822e04ddc586c38da803e64d12be3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s11033-012-2203-x$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s11033-012-2203-x$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,780,784,27924,27925,41488,42557,51319</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/23100066$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Zhao, Jinming</creatorcontrib><creatorcontrib>Zhang, Yumei</creatorcontrib><creatorcontrib>Bian, Xiaochun</creatorcontrib><creatorcontrib>Lei, Jun</creatorcontrib><creatorcontrib>Sun, Jutao</creatorcontrib><creatorcontrib>Guo, Na</creatorcontrib><creatorcontrib>Gai, Junyi</creatorcontrib><creatorcontrib>Xing, Han</creatorcontrib><title>A comparative proteomics analysis of soybean leaves under biotic and abiotic treatments</title><title>Molecular biology reports</title><addtitle>Mol Biol Rep</addtitle><addtitle>Mol Biol Rep</addtitle><description>A comparative proteomic study was made to explore the molecular mechanisms, which underlie soybean root and stem defense response caused by the oomycete
Phytophthora sojae
strain P6497. Soybean (
Glycine max
cv. Xinyixiaoheidou) seedling roots were incubated in salicylic acid, methyl jasmonate, 1-amino cyclopropane-1-carboxylic acid, hydrogen peroxide, sodium nitroprusside, vitamin B
1
and
P. sojae
zoosperm in order to determine whether the corresponding leaves play a role in the defense response at the proteomic level. The results showed that the proteome of leaves had no significant differences. Of the 21 identified proteins identified in the study, 62 % were involved in predominately in energy functions. Those involved in protein synthesis, secondary metabolism and metabolism categories followed in abundance, where proteins involved as transporters and in transcription were the least and represented only 5 %. Those related to energy were shown to be involved in photosynthesis and photorespiration activities. The present study provides important information with regards to proteomic methods aimed to study protein regulations of the soybean–
P. sojae
pathosystem, especially in terms of host resistance to this pathogen.</description><subject>Abiotic stress</subject><subject>Acetates - pharmacology</subject><subject>Amino Acid Sequence</subject><subject>Animal Anatomy</subject><subject>Animal Biochemistry</subject><subject>Biomedical and Life Sciences</subject><subject>Cyclopentanes - pharmacology</subject><subject>Glycine max - drug effects</subject><subject>Glycine max - metabolism</subject><subject>Glycine max - microbiology</subject><subject>Histology</subject><subject>Host-Pathogen Interactions</subject><subject>Leaves</subject><subject>Life Sciences</subject><subject>Molecular biology</subject><subject>Molecular Sequence Annotation</subject><subject>Molecular Sequence Data</subject><subject>Morphology</subject><subject>Oxylipins - pharmacology</subject><subject>Peptide Fragments - chemistry</subject><subject>Phytophthora - physiology</subject><subject>Plant Diseases - microbiology</subject><subject>Plant Growth Regulators - pharmacology</subject><subject>Plant Immunity</subject><subject>Plant Leaves - metabolism</subject><subject>Plant Leaves - microbiology</subject><subject>Plant Proteins - chemistry</subject><subject>Plant Proteins - metabolism</subject><subject>Plant Roots - drug effects</subject><subject>Plant Roots - metabolism</subject><subject>Proteome - chemistry</subject><subject>Proteome - metabolism</subject><subject>Proteomics</subject><subject>Soybeans</subject><subject>Stress, Physiological</subject><issn>0301-4851</issn><issn>1573-4978</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2013</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNp1kMtKAzEARYMotlY_wI0EXEfzTlyW4gsKbhSXIZPJyJTOpCaZYv_elKnixlUCOffmcgC4JPiGYKxuEyGYMYQJRZRihr6OwJQIxRC_U_oYTDHDBHEtyAScpbTCGHOixCmYUFbyWMopeJ9DF7qNjTa3Ww83MWQfutYlaHu73qU2wdDAFHaVtz1ce7v1CQ597SOs2pBbV7ga2sM9R29z5_uczsFJY9fJXxzOGXh7uH9dPKHly-PzYr5EjjOdESHUMWyV4JQ6KpWQWtiq0oo0Sqiy0VKqKfWY17UTWjqma6sx85LXhFaezcD12FuWfw4-ZbMKQyzTkyFUSq50aSkUGSkXQ0rRN2YT287GnSHY7FWaUaUpKs1epfkqmatD81B1vv5N_LgrAB2BVJ76Dx__fP1v6zcI2X5e</recordid><startdate>20130201</startdate><enddate>20130201</enddate><creator>Zhao, Jinming</creator><creator>Zhang, Yumei</creator><creator>Bian, Xiaochun</creator><creator>Lei, Jun</creator><creator>Sun, Jutao</creator><creator>Guo, Na</creator><creator>Gai, Junyi</creator><creator>Xing, Han</creator><general>Springer Netherlands</general><general>Springer Nature B.V</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7TK</scope><scope>7TM</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>88I</scope><scope>8AO</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M2P</scope><scope>M7P</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>Q9U</scope><scope>RC3</scope></search><sort><creationdate>20130201</creationdate><title>A comparative proteomics analysis of soybean leaves under biotic and abiotic treatments</title><author>Zhao, Jinming ; Zhang, Yumei ; Bian, Xiaochun ; Lei, Jun ; Sun, Jutao ; Guo, Na ; Gai, Junyi ; Xing, Han</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c438t-112c30a75422c2675685abb871f757000a22822e04ddc586c38da803e64d12be3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2013</creationdate><topic>Abiotic stress</topic><topic>Acetates - pharmacology</topic><topic>Amino Acid Sequence</topic><topic>Animal Anatomy</topic><topic>Animal Biochemistry</topic><topic>Biomedical and Life Sciences</topic><topic>Cyclopentanes - pharmacology</topic><topic>Glycine max - drug effects</topic><topic>Glycine max - metabolism</topic><topic>Glycine max - microbiology</topic><topic>Histology</topic><topic>Host-Pathogen Interactions</topic><topic>Leaves</topic><topic>Life Sciences</topic><topic>Molecular biology</topic><topic>Molecular Sequence Annotation</topic><topic>Molecular Sequence Data</topic><topic>Morphology</topic><topic>Oxylipins - pharmacology</topic><topic>Peptide Fragments - chemistry</topic><topic>Phytophthora - physiology</topic><topic>Plant Diseases - microbiology</topic><topic>Plant Growth Regulators - pharmacology</topic><topic>Plant Immunity</topic><topic>Plant Leaves - metabolism</topic><topic>Plant Leaves - microbiology</topic><topic>Plant Proteins - chemistry</topic><topic>Plant Proteins - metabolism</topic><topic>Plant Roots - drug effects</topic><topic>Plant Roots - metabolism</topic><topic>Proteome - chemistry</topic><topic>Proteome - metabolism</topic><topic>Proteomics</topic><topic>Soybeans</topic><topic>Stress, Physiological</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Zhao, Jinming</creatorcontrib><creatorcontrib>Zhang, Yumei</creatorcontrib><creatorcontrib>Bian, Xiaochun</creatorcontrib><creatorcontrib>Lei, Jun</creatorcontrib><creatorcontrib>Sun, Jutao</creatorcontrib><creatorcontrib>Guo, Na</creatorcontrib><creatorcontrib>Gai, Junyi</creatorcontrib><creatorcontrib>Xing, Han</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Neurosciences Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Science Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Science Database</collection><collection>Biological Science Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>ProQuest Central Basic</collection><collection>Genetics Abstracts</collection><jtitle>Molecular biology reports</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Zhao, Jinming</au><au>Zhang, Yumei</au><au>Bian, Xiaochun</au><au>Lei, Jun</au><au>Sun, Jutao</au><au>Guo, Na</au><au>Gai, Junyi</au><au>Xing, Han</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>A comparative proteomics analysis of soybean leaves under biotic and abiotic treatments</atitle><jtitle>Molecular biology reports</jtitle><stitle>Mol Biol Rep</stitle><addtitle>Mol Biol Rep</addtitle><date>2013-02-01</date><risdate>2013</risdate><volume>40</volume><issue>2</issue><spage>1553</spage><epage>1562</epage><pages>1553-1562</pages><issn>0301-4851</issn><eissn>1573-4978</eissn><abstract>A comparative proteomic study was made to explore the molecular mechanisms, which underlie soybean root and stem defense response caused by the oomycete
Phytophthora sojae
strain P6497. Soybean (
Glycine max
cv. Xinyixiaoheidou) seedling roots were incubated in salicylic acid, methyl jasmonate, 1-amino cyclopropane-1-carboxylic acid, hydrogen peroxide, sodium nitroprusside, vitamin B
1
and
P. sojae
zoosperm in order to determine whether the corresponding leaves play a role in the defense response at the proteomic level. The results showed that the proteome of leaves had no significant differences. Of the 21 identified proteins identified in the study, 62 % were involved in predominately in energy functions. Those involved in protein synthesis, secondary metabolism and metabolism categories followed in abundance, where proteins involved as transporters and in transcription were the least and represented only 5 %. Those related to energy were shown to be involved in photosynthesis and photorespiration activities. The present study provides important information with regards to proteomic methods aimed to study protein regulations of the soybean–
P. sojae
pathosystem, especially in terms of host resistance to this pathogen.</abstract><cop>Dordrecht</cop><pub>Springer Netherlands</pub><pmid>23100066</pmid><doi>10.1007/s11033-012-2203-x</doi><tpages>10</tpages></addata></record> |
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| subjects | Abiotic stress Acetates - pharmacology Amino Acid Sequence Animal Anatomy Animal Biochemistry Biomedical and Life Sciences Cyclopentanes - pharmacology Glycine max - drug effects Glycine max - metabolism Glycine max - microbiology Histology Host-Pathogen Interactions Leaves Life Sciences Molecular biology Molecular Sequence Annotation Molecular Sequence Data Morphology Oxylipins - pharmacology Peptide Fragments - chemistry Phytophthora - physiology Plant Diseases - microbiology Plant Growth Regulators - pharmacology Plant Immunity Plant Leaves - metabolism Plant Leaves - microbiology Plant Proteins - chemistry Plant Proteins - metabolism Plant Roots - drug effects Plant Roots - metabolism Proteome - chemistry Proteome - metabolism Proteomics Soybeans Stress, Physiological |
| title | A comparative proteomics analysis of soybean leaves under biotic and abiotic treatments |
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