Engineered red Opto-mGluR6 Opsins, a red-shifted optogenetic excitation tool, an in vitro study
Degenerative eye diseases cause partial or complete blindness due to photoreceptor degeneration. Optogenetic gene therapy is a revolutionary technique combining genetics and optical methods to control the function of neurons. Due to the inherent risk of photochemical damage, the light intensity nece...
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creator | Shamsnajafabadi, Hoda Soheili, Zahra-Soheila Sadeghi, Mehdi Samiee, Shahram Ghasemi, Pouria Zibaii, Mohammad Ismail Gholami Pourbadie, Hamid Ahmadieh, Hamid Ranaei Pirmardan, Ehsan Salehi, Najmeh Samiee, Dorsa Kashanian, Ali |
description | Degenerative eye diseases cause partial or complete blindness due to photoreceptor degeneration. Optogenetic gene therapy is a revolutionary technique combining genetics and optical methods to control the function of neurons. Due to the inherent risk of photochemical damage, the light intensity necessary to activate Opto-mGluR6 surpasses the safe threshold for retinal illumination. Conversely, red-shifted lights pose a significantly lower risk of inducing such damage compared to blue lights. We designed red-shifted Opto-mGluR6 photopigments with a wide, red-shifted working spectrum compared to Opto-mGluR6 and examined their excitation capability in vitro. ROM19, ROM18 and ROM17, red-shifted variants of Opto-mGluR6, were designed by careful bioinformatics/computational studies. The predicted molecules with the best scores were selected, synthesised and cloned into the pAAV-CMV-IRES-EGFP vector. Expression of constructs was confirmed by functional assessment in engineered HEK-GIRK cells. Spectrophotometry and patch clamp experiments demonstrated that the candidate molecules were sensitive to the desired wavelengths of the light and directly coupled light stimuli to G-protein signalling. Herein, we introduce ROM17, ROM18 and ROM19 as newly generated, red-shifted variants with maximum excitation red-shifted of ~ 40nm, 70 nm and 126 nm compared to Opto-mGluR6. |
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Optogenetic gene therapy is a revolutionary technique combining genetics and optical methods to control the function of neurons. Due to the inherent risk of photochemical damage, the light intensity necessary to activate Opto-mGluR6 surpasses the safe threshold for retinal illumination. Conversely, red-shifted lights pose a significantly lower risk of inducing such damage compared to blue lights. We designed red-shifted Opto-mGluR6 photopigments with a wide, red-shifted working spectrum compared to Opto-mGluR6 and examined their excitation capability in vitro. ROM19, ROM18 and ROM17, red-shifted variants of Opto-mGluR6, were designed by careful bioinformatics/computational studies. The predicted molecules with the best scores were selected, synthesised and cloned into the pAAV-CMV-IRES-EGFP vector. Expression of constructs was confirmed by functional assessment in engineered HEK-GIRK cells. Spectrophotometry and patch clamp experiments demonstrated that the candidate molecules were sensitive to the desired wavelengths of the light and directly coupled light stimuli to G-protein signalling. Herein, we introduce ROM17, ROM18 and ROM19 as newly generated, red-shifted variants with maximum excitation red-shifted of ~ 40nm, 70 nm and 126 nm compared to Opto-mGluR6.</description><identifier>ISSN: 1932-6203</identifier><identifier>EISSN: 1932-6203</identifier><identifier>DOI: 10.1371/journal.pone.0311102</identifier><identifier>PMID: 39446870</identifier><language>eng</language><publisher>United States: Public Library of Science</publisher><subject>Amino acids ; Analysis ; Bioinformatics ; Biology and Life Sciences ; Blindness ; Care and treatment ; Chemical synthesis ; Computational neuroscience ; Control methods ; Damage ; Degeneration ; Design ; Development and progression ; Excitation ; Excitation spectra ; Eye diseases ; Gene expression ; Gene therapy ; Genetic aspects ; Genetics ; HEK293 Cells ; Humans ; Hypotheses ; In vitro methods and tests ; Ligands ; Light ; Light intensity ; Luminous intensity ; Membranes ; Opsins ; Opsins - genetics ; Opsins - metabolism ; Optics ; Optogenetics - methods ; Patient outcomes ; Photochemicals ; Photopigments ; Photoreceptors ; Physical Sciences ; Prevention ; Protein Engineering - methods ; Proteins ; Receptors, Metabotropic Glutamate - genetics ; Receptors, Metabotropic Glutamate - metabolism ; Research and Analysis Methods ; Retina ; Retinal degeneration ; Retinal diseases ; Risk factors ; Spectrophotometry ; Wavelengths</subject><ispartof>PloS one, 2024-10, Vol.19 (10), p.e0311102</ispartof><rights>Copyright: © 2024 Shamsnajafabadi et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.</rights><rights>COPYRIGHT 2024 Public Library of Science</rights><rights>2024 Shamsnajafabadi et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>2024 Shamsnajafabadi et al 2024 Shamsnajafabadi et al</rights><rights>2024 Shamsnajafabadi et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c506t-9efd53bdd4fd239c99ba8eb227fa952310553d672dc0ab1b466efdc5345abe7d3</cites><orcidid>0000-0002-7043-3835 ; 0000-0003-1292-465X</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC11500960/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC11500960/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,723,776,780,860,881,2915,23845,27901,27902,53766,53768,79343,79344</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/39446870$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Shamsnajafabadi, Hoda</creatorcontrib><creatorcontrib>Soheili, Zahra-Soheila</creatorcontrib><creatorcontrib>Sadeghi, Mehdi</creatorcontrib><creatorcontrib>Samiee, Shahram</creatorcontrib><creatorcontrib>Ghasemi, Pouria</creatorcontrib><creatorcontrib>Zibaii, Mohammad Ismail</creatorcontrib><creatorcontrib>Gholami Pourbadie, Hamid</creatorcontrib><creatorcontrib>Ahmadieh, Hamid</creatorcontrib><creatorcontrib>Ranaei Pirmardan, Ehsan</creatorcontrib><creatorcontrib>Salehi, Najmeh</creatorcontrib><creatorcontrib>Samiee, Dorsa</creatorcontrib><creatorcontrib>Kashanian, Ali</creatorcontrib><title>Engineered red Opto-mGluR6 Opsins, a red-shifted optogenetic excitation tool, an in vitro study</title><title>PloS one</title><addtitle>PLoS One</addtitle><description>Degenerative eye diseases cause partial or complete blindness due to photoreceptor degeneration. Optogenetic gene therapy is a revolutionary technique combining genetics and optical methods to control the function of neurons. Due to the inherent risk of photochemical damage, the light intensity necessary to activate Opto-mGluR6 surpasses the safe threshold for retinal illumination. Conversely, red-shifted lights pose a significantly lower risk of inducing such damage compared to blue lights. We designed red-shifted Opto-mGluR6 photopigments with a wide, red-shifted working spectrum compared to Opto-mGluR6 and examined their excitation capability in vitro. ROM19, ROM18 and ROM17, red-shifted variants of Opto-mGluR6, were designed by careful bioinformatics/computational studies. The predicted molecules with the best scores were selected, synthesised and cloned into the pAAV-CMV-IRES-EGFP vector. Expression of constructs was confirmed by functional assessment in engineered HEK-GIRK cells. Spectrophotometry and patch clamp experiments demonstrated that the candidate molecules were sensitive to the desired wavelengths of the light and directly coupled light stimuli to G-protein signalling. 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red Opto-mGluR6 Opsins, a red-shifted optogenetic excitation tool, an in vitro study</title><author>Shamsnajafabadi, Hoda ; Soheili, Zahra-Soheila ; Sadeghi, Mehdi ; Samiee, Shahram ; Ghasemi, Pouria ; Zibaii, Mohammad Ismail ; Gholami Pourbadie, Hamid ; Ahmadieh, Hamid ; Ranaei Pirmardan, Ehsan ; Salehi, Najmeh ; Samiee, Dorsa ; Kashanian, Ali</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c506t-9efd53bdd4fd239c99ba8eb227fa952310553d672dc0ab1b466efdc5345abe7d3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2024</creationdate><topic>Amino acids</topic><topic>Analysis</topic><topic>Bioinformatics</topic><topic>Biology and Life Sciences</topic><topic>Blindness</topic><topic>Care and treatment</topic><topic>Chemical synthesis</topic><topic>Computational neuroscience</topic><topic>Control methods</topic><topic>Damage</topic><topic>Degeneration</topic><topic>Design</topic><topic>Development and 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Ali</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Engineered red Opto-mGluR6 Opsins, a red-shifted optogenetic excitation tool, an in vitro study</atitle><jtitle>PloS one</jtitle><addtitle>PLoS One</addtitle><date>2024-10-24</date><risdate>2024</risdate><volume>19</volume><issue>10</issue><spage>e0311102</spage><pages>e0311102-</pages><issn>1932-6203</issn><eissn>1932-6203</eissn><abstract>Degenerative eye diseases cause partial or complete blindness due to photoreceptor degeneration. Optogenetic gene therapy is a revolutionary technique combining genetics and optical methods to control the function of neurons. Due to the inherent risk of photochemical damage, the light intensity necessary to activate Opto-mGluR6 surpasses the safe threshold for retinal illumination. Conversely, red-shifted lights pose a significantly lower risk of inducing such damage compared to blue lights. We designed red-shifted Opto-mGluR6 photopigments with a wide, red-shifted working spectrum compared to Opto-mGluR6 and examined their excitation capability in vitro. ROM19, ROM18 and ROM17, red-shifted variants of Opto-mGluR6, were designed by careful bioinformatics/computational studies. The predicted molecules with the best scores were selected, synthesised and cloned into the pAAV-CMV-IRES-EGFP vector. Expression of constructs was confirmed by functional assessment in engineered HEK-GIRK cells. Spectrophotometry and patch clamp experiments demonstrated that the candidate molecules were sensitive to the desired wavelengths of the light and directly coupled light stimuli to G-protein signalling. Herein, we introduce ROM17, ROM18 and ROM19 as newly generated, red-shifted variants with maximum excitation red-shifted of ~ 40nm, 70 nm and 126 nm compared to Opto-mGluR6.</abstract><cop>United States</cop><pub>Public Library of Science</pub><pmid>39446870</pmid><doi>10.1371/journal.pone.0311102</doi><tpages>e0311102</tpages><orcidid>https://orcid.org/0000-0002-7043-3835</orcidid><orcidid>https://orcid.org/0000-0003-1292-465X</orcidid><oa>free_for_read</oa></addata></record> |
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source | MEDLINE; DOAJ Directory of Open Access Journals; Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals; PubMed Central; Free Full-Text Journals in Chemistry; Public Library of Science (PLoS) |
subjects | Amino acids Analysis Bioinformatics Biology and Life Sciences Blindness Care and treatment Chemical synthesis Computational neuroscience Control methods Damage Degeneration Design Development and progression Excitation Excitation spectra Eye diseases Gene expression Gene therapy Genetic aspects Genetics HEK293 Cells Humans Hypotheses In vitro methods and tests Ligands Light Light intensity Luminous intensity Membranes Opsins Opsins - genetics Opsins - metabolism Optics Optogenetics - methods Patient outcomes Photochemicals Photopigments Photoreceptors Physical Sciences Prevention Protein Engineering - methods Proteins Receptors, Metabotropic Glutamate - genetics Receptors, Metabotropic Glutamate - metabolism Research and Analysis Methods Retina Retinal degeneration Retinal diseases Risk factors Spectrophotometry Wavelengths |
title | Engineered red Opto-mGluR6 Opsins, a red-shifted optogenetic excitation tool, an in vitro study |
url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-02-01T20%3A35%3A44IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-gale_plos_&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Engineered%20red%20Opto-mGluR6%20Opsins,%20a%20red-shifted%20optogenetic%20excitation%20tool,%20an%20in%20vitro%20study&rft.jtitle=PloS%20one&rft.au=Shamsnajafabadi,%20Hoda&rft.date=2024-10-24&rft.volume=19&rft.issue=10&rft.spage=e0311102&rft.pages=e0311102-&rft.issn=1932-6203&rft.eissn=1932-6203&rft_id=info:doi/10.1371/journal.pone.0311102&rft_dat=%3Cgale_plos_%3EA813480689%3C/gale_plos_%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=3120495211&rft_id=info:pmid/39446870&rft_galeid=A813480689&rfr_iscdi=true |