Fuzzy clustering of 24-2 visual field patterns can detect glaucoma progression
To represent 24-2 visual field (VF) losses of individual patients using a hybrid approach of archetypal analysis (AA) and fuzzy c-means (FCM) clustering. In this multicenter retrospective study, we classified characteristic patterns of 24-2 VF using AA and decomposed them with FCM clustering. We pre...
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creator | Kim, Hwayeong Moon, Sangwoo Lee, Joohwang Kim, EunAh Jin, Sang Wook Kim, Jung Lim Lee, Seung Uk Kim, Jinmi Yoo, Seungtae Lee, Jiwon Song, Giltae Lee, Jiwoong |
description | To represent 24-2 visual field (VF) losses of individual patients using a hybrid approach of archetypal analysis (AA) and fuzzy c-means (FCM) clustering.
In this multicenter retrospective study, we classified characteristic patterns of 24-2 VF using AA and decomposed them with FCM clustering. We predicted the change in mean deviation (MD) through supervised machine learning from decomposition coefficient change. In addition, we compared the areas under the receiver operating characteristic curves (AUCs) of the decomposition coefficient slopes to detect VF progression using three criteria: MD slope, Visual Field Index slope, and pointwise linear regression analysis.
We identified 16 characteristic patterns (archetypes or ATs) of 24-2 VF from 132,938 VFs of 18,033 participants using AA. The hybrid approach using FCM revealed a lower mean squared error and greater correlation coefficient than the AA single approach for predicting MD change (all P ≤ 0.001). Three of 16 AUCs of the FCM decomposition coefficient slopes outperformed the AA decomposition coefficient slopes in detecting VF progression for all three criteria (AT5, superior altitudinal defect; AT10, double arcuate defect; AT13, total loss) (all P ≤ 0.028).
A hybrid approach combining AA and FCM to analyze 24-2 VF can visualize VF tests in characteristic patterns and enhance detection of VF progression with lossless decomposition. |
doi_str_mv | 10.1371/journal.pone.0309011 |
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In this multicenter retrospective study, we classified characteristic patterns of 24-2 VF using AA and decomposed them with FCM clustering. We predicted the change in mean deviation (MD) through supervised machine learning from decomposition coefficient change. In addition, we compared the areas under the receiver operating characteristic curves (AUCs) of the decomposition coefficient slopes to detect VF progression using three criteria: MD slope, Visual Field Index slope, and pointwise linear regression analysis.
We identified 16 characteristic patterns (archetypes or ATs) of 24-2 VF from 132,938 VFs of 18,033 participants using AA. The hybrid approach using FCM revealed a lower mean squared error and greater correlation coefficient than the AA single approach for predicting MD change (all P ≤ 0.001). Three of 16 AUCs of the FCM decomposition coefficient slopes outperformed the AA decomposition coefficient slopes in detecting VF progression for all three criteria (AT5, superior altitudinal defect; AT10, double arcuate defect; AT13, total loss) (all P ≤ 0.028).
A hybrid approach combining AA and FCM to analyze 24-2 VF can visualize VF tests in characteristic patterns and enhance detection of VF progression with lossless decomposition.</description><identifier>ISSN: 1932-6203</identifier><identifier>EISSN: 1932-6203</identifier><identifier>DOI: 10.1371/journal.pone.0309011</identifier><identifier>PMID: 39231172</identifier><language>eng</language><publisher>United States: Public Library of Science</publisher><subject>Aged ; Algorithms ; Analysis ; Area Under Curve ; Artificial intelligence ; Automation ; Biology and Life Sciences ; Care and treatment ; Cluster Analysis ; Clustering ; Correlation coefficient ; Correlation coefficients ; Criteria ; Datasets ; Decomposition ; Defects ; Development and progression ; Disease Progression ; Error detection ; Female ; Fuzzy Logic ; Glaucoma ; Glaucoma - diagnosis ; Glaucoma - physiopathology ; Health aspects ; Hospitals ; Humans ; Machine learning ; Male ; Medicine and Health Sciences ; Methods ; Middle Aged ; Physical Sciences ; Quality of life ; Regression analysis ; Research and Analysis Methods ; Retrospective Studies ; ROC Curve ; Slopes ; Social Sciences ; Supervised learning ; Visual field ; Visual Field Tests - methods ; Visual fields ; Visual Fields - physiology</subject><ispartof>PloS one, 2024-09, Vol.19 (9), p.e0309011</ispartof><rights>Copyright: © 2024 Kim et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.</rights><rights>COPYRIGHT 2024 Public Library of Science</rights><rights>2024 Kim et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>2024 Kim et al 2024 Kim et al</rights><rights>2024 Kim et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c572t-85b83fc65f531fe60eb742a875f8b070efb37df374d7fcce2b390bb4405ac33d3</cites><orcidid>0000-0002-1053-612X</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC11373827/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC11373827/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,723,776,780,860,881,2096,2915,23845,27901,27902,53766,53768,79342,79343</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/39231172$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Kim, Hwayeong</creatorcontrib><creatorcontrib>Moon, Sangwoo</creatorcontrib><creatorcontrib>Lee, Joohwang</creatorcontrib><creatorcontrib>Kim, EunAh</creatorcontrib><creatorcontrib>Jin, Sang Wook</creatorcontrib><creatorcontrib>Kim, Jung Lim</creatorcontrib><creatorcontrib>Lee, Seung Uk</creatorcontrib><creatorcontrib>Kim, Jinmi</creatorcontrib><creatorcontrib>Yoo, Seungtae</creatorcontrib><creatorcontrib>Lee, Jiwon</creatorcontrib><creatorcontrib>Song, Giltae</creatorcontrib><creatorcontrib>Lee, Jiwoong</creatorcontrib><title>Fuzzy clustering of 24-2 visual field patterns can detect glaucoma progression</title><title>PloS one</title><addtitle>PLoS One</addtitle><description>To represent 24-2 visual field (VF) losses of individual patients using a hybrid approach of archetypal analysis (AA) and fuzzy c-means (FCM) clustering.
In this multicenter retrospective study, we classified characteristic patterns of 24-2 VF using AA and decomposed them with FCM clustering. We predicted the change in mean deviation (MD) through supervised machine learning from decomposition coefficient change. In addition, we compared the areas under the receiver operating characteristic curves (AUCs) of the decomposition coefficient slopes to detect VF progression using three criteria: MD slope, Visual Field Index slope, and pointwise linear regression analysis.
We identified 16 characteristic patterns (archetypes or ATs) of 24-2 VF from 132,938 VFs of 18,033 participants using AA. The hybrid approach using FCM revealed a lower mean squared error and greater correlation coefficient than the AA single approach for predicting MD change (all P ≤ 0.001). Three of 16 AUCs of the FCM decomposition coefficient slopes outperformed the AA decomposition coefficient slopes in detecting VF progression for all three criteria (AT5, superior altitudinal defect; AT10, double arcuate defect; AT13, total loss) (all P ≤ 0.028).
A hybrid approach combining AA and FCM to analyze 24-2 VF can visualize VF tests in characteristic patterns and enhance detection of VF progression with lossless decomposition.</description><subject>Aged</subject><subject>Algorithms</subject><subject>Analysis</subject><subject>Area Under Curve</subject><subject>Artificial intelligence</subject><subject>Automation</subject><subject>Biology and Life Sciences</subject><subject>Care and treatment</subject><subject>Cluster Analysis</subject><subject>Clustering</subject><subject>Correlation coefficient</subject><subject>Correlation coefficients</subject><subject>Criteria</subject><subject>Datasets</subject><subject>Decomposition</subject><subject>Defects</subject><subject>Development and progression</subject><subject>Disease Progression</subject><subject>Error detection</subject><subject>Female</subject><subject>Fuzzy Logic</subject><subject>Glaucoma</subject><subject>Glaucoma - diagnosis</subject><subject>Glaucoma - physiopathology</subject><subject>Health aspects</subject><subject>Hospitals</subject><subject>Humans</subject><subject>Machine learning</subject><subject>Male</subject><subject>Medicine and Health Sciences</subject><subject>Methods</subject><subject>Middle Aged</subject><subject>Physical Sciences</subject><subject>Quality of life</subject><subject>Regression analysis</subject><subject>Research and Analysis Methods</subject><subject>Retrospective Studies</subject><subject>ROC Curve</subject><subject>Slopes</subject><subject>Social Sciences</subject><subject>Supervised learning</subject><subject>Visual field</subject><subject>Visual Field Tests - methods</subject><subject>Visual fields</subject><subject>Visual Fields - physiology</subject><issn>1932-6203</issn><issn>1932-6203</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2024</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>BENPR</sourceid><sourceid>DOA</sourceid><recordid>eNqNkk1v1DAQhiMEoqXwDxBEQkJw2MUfSeycUFVRWKmiEl9Xy3HGWa-88dZ2Ktpfj8Om1Qb1gHyw5XnmHc_4zbKXGC0xZfjDxg2-l3a5cz0sEUU1wvhRdoxrShYVQfTxwfkoexbCBqGS8qp6mh3RmlCMGTnOvp4Pt7c3ubJDiOBN3-VO56RYkPzahEHaXBuwbb6TMYX7kCvZ5y1EUDHvrByU28p8513nIQTj-ufZEy1tgBfTfpL9PP_04-zL4uLy8-rs9GKhSkbigpcNp1pVpS4p1lAhaFhBJGel5g1iCHRDWaspK1qmlQLS0Bo1TVGgUipKW3qSvd7r7qwLYhpFEBQjxElZIZ6I1Z5ondyInTdb6W-Ek0b8vXC-E9JHoyyIihNScaC0rnXRFoQ3khFAuCk1AGZF0vo4VRuaLbQK-uilnYnOI71Zi85dC5x-inLCksK7ScG7qwFCFFsTFFgre3DD_uE1pgUa0Tf_oA-3N1GdTB2YXrtUWI2i4pQjRkpc1OPDlw9QabWwNSoZR5t0P0t4P0tITITfsZNDCGL1_dv_s5e_5uzbA3YN0sZ1cHaIyTNhDhZ7UHkXggd9P2WMxOj7u2mI0fdi8n1Ke3X4Q_dJd0anfwBWF_wa</recordid><startdate>20240904</startdate><enddate>20240904</enddate><creator>Kim, Hwayeong</creator><creator>Moon, Sangwoo</creator><creator>Lee, Joohwang</creator><creator>Kim, EunAh</creator><creator>Jin, Sang Wook</creator><creator>Kim, Jung Lim</creator><creator>Lee, Seung Uk</creator><creator>Kim, Jinmi</creator><creator>Yoo, Seungtae</creator><creator>Lee, Jiwon</creator><creator>Song, Giltae</creator><creator>Lee, Jiwoong</creator><general>Public Library of Science</general><general>Public Library of Science (PLoS)</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>IOV</scope><scope>ISR</scope><scope>3V.</scope><scope>7QG</scope><scope>7QL</scope><scope>7QO</scope><scope>7RV</scope><scope>7SN</scope><scope>7SS</scope><scope>7T5</scope><scope>7TG</scope><scope>7TM</scope><scope>7U9</scope><scope>7X2</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8AO</scope><scope>8C1</scope><scope>8FD</scope><scope>8FE</scope><scope>8FG</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABJCF</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>ARAPS</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BGLVJ</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>D1I</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>KB.</scope><scope>KB0</scope><scope>KL.</scope><scope>L6V</scope><scope>LK8</scope><scope>M0K</scope><scope>M0S</scope><scope>M1P</scope><scope>M7N</scope><scope>M7P</scope><scope>M7S</scope><scope>NAPCQ</scope><scope>P5Z</scope><scope>P62</scope><scope>P64</scope><scope>PATMY</scope><scope>PDBOC</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>PTHSS</scope><scope>PYCSY</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope><orcidid>https://orcid.org/0000-0002-1053-612X</orcidid></search><sort><creationdate>20240904</creationdate><title>Fuzzy clustering of 24-2 visual field patterns can detect glaucoma progression</title><author>Kim, Hwayeong ; Moon, Sangwoo ; Lee, Joohwang ; Kim, EunAh ; Jin, Sang Wook ; Kim, Jung Lim ; Lee, Seung Uk ; Kim, Jinmi ; Yoo, Seungtae ; Lee, Jiwon ; Song, Giltae ; Lee, Jiwoong</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c572t-85b83fc65f531fe60eb742a875f8b070efb37df374d7fcce2b390bb4405ac33d3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2024</creationdate><topic>Aged</topic><topic>Algorithms</topic><topic>Analysis</topic><topic>Area Under Curve</topic><topic>Artificial intelligence</topic><topic>Automation</topic><topic>Biology and Life Sciences</topic><topic>Care and treatment</topic><topic>Cluster Analysis</topic><topic>Clustering</topic><topic>Correlation coefficient</topic><topic>Correlation coefficients</topic><topic>Criteria</topic><topic>Datasets</topic><topic>Decomposition</topic><topic>Defects</topic><topic>Development and progression</topic><topic>Disease Progression</topic><topic>Error detection</topic><topic>Female</topic><topic>Fuzzy Logic</topic><topic>Glaucoma</topic><topic>Glaucoma - 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In this multicenter retrospective study, we classified characteristic patterns of 24-2 VF using AA and decomposed them with FCM clustering. We predicted the change in mean deviation (MD) through supervised machine learning from decomposition coefficient change. In addition, we compared the areas under the receiver operating characteristic curves (AUCs) of the decomposition coefficient slopes to detect VF progression using three criteria: MD slope, Visual Field Index slope, and pointwise linear regression analysis.
We identified 16 characteristic patterns (archetypes or ATs) of 24-2 VF from 132,938 VFs of 18,033 participants using AA. The hybrid approach using FCM revealed a lower mean squared error and greater correlation coefficient than the AA single approach for predicting MD change (all P ≤ 0.001). Three of 16 AUCs of the FCM decomposition coefficient slopes outperformed the AA decomposition coefficient slopes in detecting VF progression for all three criteria (AT5, superior altitudinal defect; AT10, double arcuate defect; AT13, total loss) (all P ≤ 0.028).
A hybrid approach combining AA and FCM to analyze 24-2 VF can visualize VF tests in characteristic patterns and enhance detection of VF progression with lossless decomposition.</abstract><cop>United States</cop><pub>Public Library of Science</pub><pmid>39231172</pmid><doi>10.1371/journal.pone.0309011</doi><tpages>e0309011</tpages><orcidid>https://orcid.org/0000-0002-1053-612X</orcidid><oa>free_for_read</oa></addata></record> |
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source | Public Library of Science (PLoS) Journals Open Access; MEDLINE; DOAJ Directory of Open Access Journals; EZB-FREE-00999 freely available EZB journals; PubMed Central; Free Full-Text Journals in Chemistry |
subjects | Aged Algorithms Analysis Area Under Curve Artificial intelligence Automation Biology and Life Sciences Care and treatment Cluster Analysis Clustering Correlation coefficient Correlation coefficients Criteria Datasets Decomposition Defects Development and progression Disease Progression Error detection Female Fuzzy Logic Glaucoma Glaucoma - diagnosis Glaucoma - physiopathology Health aspects Hospitals Humans Machine learning Male Medicine and Health Sciences Methods Middle Aged Physical Sciences Quality of life Regression analysis Research and Analysis Methods Retrospective Studies ROC Curve Slopes Social Sciences Supervised learning Visual field Visual Field Tests - methods Visual fields Visual Fields - physiology |
title | Fuzzy clustering of 24-2 visual field patterns can detect glaucoma progression |
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