Virus production in shallow groundwater at the bank of the Danube River
Viruses play a crucial role in regulating prokaryotic populations, yet their impact on subsurface environments, specifically groundwater habitats, remains poorly understood. In this study, we employed the virus-dilution approach to measure lytic virus production rates in shallow groundwater located...
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| Veröffentlicht in: | PloS one 2024-08, Vol.19 (8), p.e0306346 |
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| description | Viruses play a crucial role in regulating prokaryotic populations, yet their impact on subsurface environments, specifically groundwater habitats, remains poorly understood. In this study, we employed the virus-dilution approach to measure lytic virus production rates in shallow groundwater located near the city of Vienna (Austria) during the period from July-November 2020. Physico-chemical parameters (pH, electrical conductivity, water temperature, concentration of dissolved oxygen), prokaryotic, and viral abundance, and viral decay rates were monitored as well. Our findings revealed low virus-to-prokaryote ratios varying between 0.9-3.9 throughout the study period and a lack of correlation between prokaryotic and viral abundance in groundwater. Virus production rates varied between 9-12% of viral abundance h-1 in July-August and between 34-36% of viral abundance h-1 in October-November. Seasonal variations in virus production rates were found to be correlated with electrical conductivity, revealing ~3.5 times higher virus production rates during periods with high electrical conductivity and low groundwater recharge in October-November compared to July-August with higher groundwater recharge and lower electrical conductivity. Our data indicate that groundwater recharge disrupts the balance between virus and prokaryotic host communities, resulting in a deficiency of suitable prokaryotic host cells for viral proliferation. |
| doi_str_mv | 10.1371/journal.pone.0306346 |
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In this study, we employed the virus-dilution approach to measure lytic virus production rates in shallow groundwater located near the city of Vienna (Austria) during the period from July-November 2020. Physico-chemical parameters (pH, electrical conductivity, water temperature, concentration of dissolved oxygen), prokaryotic, and viral abundance, and viral decay rates were monitored as well. Our findings revealed low virus-to-prokaryote ratios varying between 0.9-3.9 throughout the study period and a lack of correlation between prokaryotic and viral abundance in groundwater. Virus production rates varied between 9-12% of viral abundance h-1 in July-August and between 34-36% of viral abundance h-1 in October-November. Seasonal variations in virus production rates were found to be correlated with electrical conductivity, revealing ~3.5 times higher virus production rates during periods with high electrical conductivity and low groundwater recharge in October-November compared to July-August with higher groundwater recharge and lower electrical conductivity. Our data indicate that groundwater recharge disrupts the balance between virus and prokaryotic host communities, resulting in a deficiency of suitable prokaryotic host cells for viral proliferation.</description><identifier>ISSN: 1932-6203</identifier><identifier>EISSN: 1932-6203</identifier><identifier>DOI: 10.1371/journal.pone.0306346</identifier><identifier>PMID: 39208231</identifier><language>eng</language><publisher>United States: Public Library of Science</publisher><subject>Abundance ; Aquifers ; Austria ; Biogeochemistry ; Biology and Life Sciences ; Carbon ; Cell proliferation ; Decay rate ; Dilution ; Dissolved oxygen ; Earth Sciences ; Ecology and Environmental Sciences ; Electric Conductivity ; Electric properties ; Electrical conductivity ; Electrical resistivity ; Environmental aspects ; Ethylenediaminetetraacetic acid ; Excommunication ; Groundwater - virology ; Groundwater data ; Groundwater discharge ; Groundwater recharge ; Habitats ; Host-virus relationships ; Infections ; Influence ; Physical Sciences ; Prokaryotes ; Rivers - virology ; Seasonal variations ; Seasons ; Temperature ; Viral infections ; Viruses ; Viruses - isolation & purification ; Water Microbiology ; Water temperature ; Water, Underground</subject><ispartof>PloS one, 2024-08, Vol.19 (8), p.e0306346</ispartof><rights>Copyright: © 2024 Pleyer et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.</rights><rights>COPYRIGHT 2024 Public Library of Science</rights><rights>2024 Pleyer et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>2024 Pleyer et al 2024 Pleyer et al</rights><rights>2024 Pleyer et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c572t-77d2eb613ed6ac49b0ca010ebdcfbbcf267069c58cbbcab418ed20176a16e7753</cites><orcidid>0000-0001-6327-0209</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC11361564/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC11361564/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,723,776,780,860,881,2096,2915,23845,27901,27902,53766,53768,79343,79344</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/39208231$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Pleyer, Daniel</creatorcontrib><creatorcontrib>Griebler, Christian</creatorcontrib><creatorcontrib>Winter, Christian</creatorcontrib><title>Virus production in shallow groundwater at the bank of the Danube River</title><title>PloS one</title><addtitle>PLoS One</addtitle><description>Viruses play a crucial role in regulating prokaryotic populations, yet their impact on subsurface environments, specifically groundwater habitats, remains poorly understood. In this study, we employed the virus-dilution approach to measure lytic virus production rates in shallow groundwater located near the city of Vienna (Austria) during the period from July-November 2020. Physico-chemical parameters (pH, electrical conductivity, water temperature, concentration of dissolved oxygen), prokaryotic, and viral abundance, and viral decay rates were monitored as well. Our findings revealed low virus-to-prokaryote ratios varying between 0.9-3.9 throughout the study period and a lack of correlation between prokaryotic and viral abundance in groundwater. Virus production rates varied between 9-12% of viral abundance h-1 in July-August and between 34-36% of viral abundance h-1 in October-November. 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Our data indicate that groundwater recharge disrupts the balance between virus and prokaryotic host communities, resulting in a deficiency of suitable prokaryotic host cells for viral proliferation.</description><subject>Abundance</subject><subject>Aquifers</subject><subject>Austria</subject><subject>Biogeochemistry</subject><subject>Biology and Life Sciences</subject><subject>Carbon</subject><subject>Cell proliferation</subject><subject>Decay rate</subject><subject>Dilution</subject><subject>Dissolved oxygen</subject><subject>Earth Sciences</subject><subject>Ecology and Environmental Sciences</subject><subject>Electric Conductivity</subject><subject>Electric properties</subject><subject>Electrical conductivity</subject><subject>Electrical resistivity</subject><subject>Environmental aspects</subject><subject>Ethylenediaminetetraacetic acid</subject><subject>Excommunication</subject><subject>Groundwater - virology</subject><subject>Groundwater data</subject><subject>Groundwater discharge</subject><subject>Groundwater recharge</subject><subject>Habitats</subject><subject>Host-virus relationships</subject><subject>Infections</subject><subject>Influence</subject><subject>Physical Sciences</subject><subject>Prokaryotes</subject><subject>Rivers - 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Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>PloS one</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Pleyer, Daniel</au><au>Griebler, Christian</au><au>Winter, Christian</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Virus production in shallow groundwater at the bank of the Danube River</atitle><jtitle>PloS one</jtitle><addtitle>PLoS One</addtitle><date>2024-08-29</date><risdate>2024</risdate><volume>19</volume><issue>8</issue><spage>e0306346</spage><pages>e0306346-</pages><issn>1932-6203</issn><eissn>1932-6203</eissn><abstract>Viruses play a crucial role in regulating prokaryotic populations, yet their impact on subsurface environments, specifically groundwater habitats, remains poorly understood. In this study, we employed the virus-dilution approach to measure lytic virus production rates in shallow groundwater located near the city of Vienna (Austria) during the period from July-November 2020. Physico-chemical parameters (pH, electrical conductivity, water temperature, concentration of dissolved oxygen), prokaryotic, and viral abundance, and viral decay rates were monitored as well. Our findings revealed low virus-to-prokaryote ratios varying between 0.9-3.9 throughout the study period and a lack of correlation between prokaryotic and viral abundance in groundwater. Virus production rates varied between 9-12% of viral abundance h-1 in July-August and between 34-36% of viral abundance h-1 in October-November. Seasonal variations in virus production rates were found to be correlated with electrical conductivity, revealing ~3.5 times higher virus production rates during periods with high electrical conductivity and low groundwater recharge in October-November compared to July-August with higher groundwater recharge and lower electrical conductivity. Our data indicate that groundwater recharge disrupts the balance between virus and prokaryotic host communities, resulting in a deficiency of suitable prokaryotic host cells for viral proliferation.</abstract><cop>United States</cop><pub>Public Library of Science</pub><pmid>39208231</pmid><doi>10.1371/journal.pone.0306346</doi><tpages>e0306346</tpages><orcidid>https://orcid.org/0000-0001-6327-0209</orcidid><oa>free_for_read</oa></addata></record> |
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| subjects | Abundance Aquifers Austria Biogeochemistry Biology and Life Sciences Carbon Cell proliferation Decay rate Dilution Dissolved oxygen Earth Sciences Ecology and Environmental Sciences Electric Conductivity Electric properties Electrical conductivity Electrical resistivity Environmental aspects Ethylenediaminetetraacetic acid Excommunication Groundwater - virology Groundwater data Groundwater discharge Groundwater recharge Habitats Host-virus relationships Infections Influence Physical Sciences Prokaryotes Rivers - virology Seasonal variations Seasons Temperature Viral infections Viruses Viruses - isolation & purification Water Microbiology Water temperature Water, Underground |
| title | Virus production in shallow groundwater at the bank of the Danube River |
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