Stone decision engine accurately predicts stone removal and treatment complications for shock wave lithotripsy and laser ureterorenoscopy patients
Kidney stones form when mineral salts crystallize in the urinary tract. While most stones exit the body in the urine stream, some can block the ureteropelvic junction or ureters, leading to severe lower back pain, blood in the urine, vomiting, and painful urination. Imaging technologies, such as X-r...
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description | Kidney stones form when mineral salts crystallize in the urinary tract. While most stones exit the body in the urine stream, some can block the ureteropelvic junction or ureters, leading to severe lower back pain, blood in the urine, vomiting, and painful urination. Imaging technologies, such as X-rays or ureterorenoscopy (URS), are typically used to detect kidney stones. Subsequently, these stones are fragmented into smaller pieces using shock wave lithotripsy (SWL) or laser URS. Both treatments yield subtly different patient outcomes. To predict successful stone removal and complication outcomes, Artificial Neural Network models were trained on 15,126 SWL and 2,116 URS patient records. These records include patient metrics like Body Mass Index and age, as well as treatment outcomes obtained using various medical instruments and healthcare professionals. Due to the low number of outcome failures in the data (e.g., treatment complications), Nearest Neighbor and Synthetic Minority Oversampling Technique (SMOTE) models were implemented to improve prediction accuracies. To reduce noise in the predictions, ensemble modeling was employed. The average prediction accuracies based on Confusion Matrices for SWL stone removal and treatment complications were 84.8% and 95.0%, respectively, while those for URS were 89.0% and 92.2%, respectively. The average prediction accuracies for SWL based on Area-Under-the-Curve were 74.7% and 62.9%, respectively, while those for URS were 77.2% and 78.9%, respectively. Taken together, the approach yielded moderate to high accurate predictions, regardless of treatment or outcome. These models were incorporated into a Stone Decision Engine web application (http://peteranoble.com/webapps.html) that suggests the best interventions to healthcare providers based on individual patient metrics. |
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While most stones exit the body in the urine stream, some can block the ureteropelvic junction or ureters, leading to severe lower back pain, blood in the urine, vomiting, and painful urination. Imaging technologies, such as X-rays or ureterorenoscopy (URS), are typically used to detect kidney stones. Subsequently, these stones are fragmented into smaller pieces using shock wave lithotripsy (SWL) or laser URS. Both treatments yield subtly different patient outcomes. To predict successful stone removal and complication outcomes, Artificial Neural Network models were trained on 15,126 SWL and 2,116 URS patient records. These records include patient metrics like Body Mass Index and age, as well as treatment outcomes obtained using various medical instruments and healthcare professionals. Due to the low number of outcome failures in the data (e.g., treatment complications), Nearest Neighbor and Synthetic Minority Oversampling Technique (SMOTE) models were implemented to improve prediction accuracies. To reduce noise in the predictions, ensemble modeling was employed. The average prediction accuracies based on Confusion Matrices for SWL stone removal and treatment complications were 84.8% and 95.0%, respectively, while those for URS were 89.0% and 92.2%, respectively. The average prediction accuracies for SWL based on Area-Under-the-Curve were 74.7% and 62.9%, respectively, while those for URS were 77.2% and 78.9%, respectively. Taken together, the approach yielded moderate to high accurate predictions, regardless of treatment or outcome. These models were incorporated into a Stone Decision Engine web application (http://peteranoble.com/webapps.html) that suggests the best interventions to healthcare providers based on individual patient metrics.</description><identifier>ISSN: 1932-6203</identifier><identifier>EISSN: 1932-6203</identifier><identifier>DOI: 10.1371/journal.pone.0301812</identifier><identifier>PMID: 38696418</identifier><language>eng</language><publisher>United States: Public Library of Science</publisher><subject>Accuracy ; Adult ; Applications programs ; Artificial neural networks ; Back pain ; Backache ; Biology and Life Sciences ; Body mass index ; Body size ; Calculi ; Care and treatment ; Clinical outcomes ; Complications and side effects ; Computer and Information Sciences ; Datasets ; Decision support systems ; Diabetes ; Engineering and Technology ; Female ; Health aspects ; Health care ; Health care industry ; Health services ; Humans ; Imaging systems ; Intervention ; Kidney Calculi - surgery ; Kidney Calculi - therapy ; Kidney stones ; Kidneys ; Lasers ; Lithotripsy ; Lithotripsy - adverse effects ; Lithotripsy - methods ; Low back pain ; Male ; Medical equipment ; Medical instruments ; Medical personnel ; Medical records ; Medical research ; Medicine and Health Sciences ; Medicine, Experimental ; Middle Aged ; Nephrolithiasis ; Neural networks ; Neural Networks, Computer ; Neurons ; Noise control ; Noise prediction ; Noise reduction ; Patient outcomes ; Patients ; Physiological apparatus ; Predictions ; Prognosis ; Shock waves ; Treatment Outcome ; Ureteroscopy - adverse effects ; Ureteroscopy - methods ; Urinary tract ; Urination ; Urine ; Variables ; Vomiting</subject><ispartof>PloS one, 2024-05, Vol.19 (5), p.e0301812-e0301812</ispartof><rights>Copyright: © 2024 Noble et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.</rights><rights>COPYRIGHT 2024 Public Library of Science</rights><rights>2024 Noble et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>2024 Noble et al 2024 Noble et al</rights><rights>2024 Noble et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c642t-bbd4bcd8be131e1b7cb84a0a9bfdb42570a9876bceec626adba91aaddfc180af3</cites><orcidid>0000-0002-6013-2588</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC11065282/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC11065282/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,315,729,782,786,866,887,2106,2932,23875,27933,27934,53800,53802</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/38696418$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><contributor>Eissa, Ahmed Abdelmotteleb Taha</contributor><creatorcontrib>Noble, Peter A</creatorcontrib><creatorcontrib>Hamilton, Blake D</creatorcontrib><creatorcontrib>Gerber, Glenn</creatorcontrib><title>Stone decision engine accurately predicts stone removal and treatment complications for shock wave lithotripsy and laser ureterorenoscopy patients</title><title>PloS one</title><addtitle>PLoS One</addtitle><description>Kidney stones form when mineral salts crystallize in the urinary tract. While most stones exit the body in the urine stream, some can block the ureteropelvic junction or ureters, leading to severe lower back pain, blood in the urine, vomiting, and painful urination. Imaging technologies, such as X-rays or ureterorenoscopy (URS), are typically used to detect kidney stones. Subsequently, these stones are fragmented into smaller pieces using shock wave lithotripsy (SWL) or laser URS. Both treatments yield subtly different patient outcomes. To predict successful stone removal and complication outcomes, Artificial Neural Network models were trained on 15,126 SWL and 2,116 URS patient records. These records include patient metrics like Body Mass Index and age, as well as treatment outcomes obtained using various medical instruments and healthcare professionals. Due to the low number of outcome failures in the data (e.g., treatment complications), Nearest Neighbor and Synthetic Minority Oversampling Technique (SMOTE) models were implemented to improve prediction accuracies. To reduce noise in the predictions, ensemble modeling was employed. The average prediction accuracies based on Confusion Matrices for SWL stone removal and treatment complications were 84.8% and 95.0%, respectively, while those for URS were 89.0% and 92.2%, respectively. The average prediction accuracies for SWL based on Area-Under-the-Curve were 74.7% and 62.9%, respectively, while those for URS were 77.2% and 78.9%, respectively. Taken together, the approach yielded moderate to high accurate predictions, regardless of treatment or outcome. These models were incorporated into a Stone Decision Engine web application (http://peteranoble.com/webapps.html) that suggests the best interventions to healthcare providers based on individual patient metrics.</description><subject>Accuracy</subject><subject>Adult</subject><subject>Applications programs</subject><subject>Artificial neural networks</subject><subject>Back pain</subject><subject>Backache</subject><subject>Biology and Life Sciences</subject><subject>Body mass index</subject><subject>Body size</subject><subject>Calculi</subject><subject>Care and treatment</subject><subject>Clinical outcomes</subject><subject>Complications and side effects</subject><subject>Computer and Information Sciences</subject><subject>Datasets</subject><subject>Decision support systems</subject><subject>Diabetes</subject><subject>Engineering and Technology</subject><subject>Female</subject><subject>Health aspects</subject><subject>Health care</subject><subject>Health care industry</subject><subject>Health services</subject><subject>Humans</subject><subject>Imaging systems</subject><subject>Intervention</subject><subject>Kidney Calculi - surgery</subject><subject>Kidney Calculi - therapy</subject><subject>Kidney stones</subject><subject>Kidneys</subject><subject>Lasers</subject><subject>Lithotripsy</subject><subject>Lithotripsy - adverse effects</subject><subject>Lithotripsy - methods</subject><subject>Low back pain</subject><subject>Male</subject><subject>Medical equipment</subject><subject>Medical instruments</subject><subject>Medical personnel</subject><subject>Medical records</subject><subject>Medical research</subject><subject>Medicine and Health Sciences</subject><subject>Medicine, Experimental</subject><subject>Middle Aged</subject><subject>Nephrolithiasis</subject><subject>Neural networks</subject><subject>Neural Networks, Computer</subject><subject>Neurons</subject><subject>Noise control</subject><subject>Noise prediction</subject><subject>Noise reduction</subject><subject>Patient outcomes</subject><subject>Patients</subject><subject>Physiological apparatus</subject><subject>Predictions</subject><subject>Prognosis</subject><subject>Shock waves</subject><subject>Treatment Outcome</subject><subject>Ureteroscopy - 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Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>PloS one</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Noble, Peter A</au><au>Hamilton, Blake D</au><au>Gerber, Glenn</au><au>Eissa, Ahmed Abdelmotteleb Taha</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Stone decision engine accurately predicts stone removal and treatment complications for shock wave lithotripsy and laser ureterorenoscopy patients</atitle><jtitle>PloS one</jtitle><addtitle>PLoS One</addtitle><date>2024-05-02</date><risdate>2024</risdate><volume>19</volume><issue>5</issue><spage>e0301812</spage><epage>e0301812</epage><pages>e0301812-e0301812</pages><issn>1932-6203</issn><eissn>1932-6203</eissn><abstract>Kidney stones form when mineral salts crystallize in the urinary tract. While most stones exit the body in the urine stream, some can block the ureteropelvic junction or ureters, leading to severe lower back pain, blood in the urine, vomiting, and painful urination. Imaging technologies, such as X-rays or ureterorenoscopy (URS), are typically used to detect kidney stones. Subsequently, these stones are fragmented into smaller pieces using shock wave lithotripsy (SWL) or laser URS. Both treatments yield subtly different patient outcomes. To predict successful stone removal and complication outcomes, Artificial Neural Network models were trained on 15,126 SWL and 2,116 URS patient records. These records include patient metrics like Body Mass Index and age, as well as treatment outcomes obtained using various medical instruments and healthcare professionals. Due to the low number of outcome failures in the data (e.g., treatment complications), Nearest Neighbor and Synthetic Minority Oversampling Technique (SMOTE) models were implemented to improve prediction accuracies. To reduce noise in the predictions, ensemble modeling was employed. The average prediction accuracies based on Confusion Matrices for SWL stone removal and treatment complications were 84.8% and 95.0%, respectively, while those for URS were 89.0% and 92.2%, respectively. The average prediction accuracies for SWL based on Area-Under-the-Curve were 74.7% and 62.9%, respectively, while those for URS were 77.2% and 78.9%, respectively. Taken together, the approach yielded moderate to high accurate predictions, regardless of treatment or outcome. These models were incorporated into a Stone Decision Engine web application (http://peteranoble.com/webapps.html) that suggests the best interventions to healthcare providers based on individual patient metrics.</abstract><cop>United States</cop><pub>Public Library of Science</pub><pmid>38696418</pmid><doi>10.1371/journal.pone.0301812</doi><tpages>e0301812</tpages><orcidid>https://orcid.org/0000-0002-6013-2588</orcidid><oa>free_for_read</oa></addata></record> |
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recordid | cdi_plos_journals_3069285388 |
source | MEDLINE; DOAJ Directory of Open Access Journals; Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals; Public Library of Science (PLoS) Journals Open Access; PubMed Central; Free Full-Text Journals in Chemistry |
subjects | Accuracy Adult Applications programs Artificial neural networks Back pain Backache Biology and Life Sciences Body mass index Body size Calculi Care and treatment Clinical outcomes Complications and side effects Computer and Information Sciences Datasets Decision support systems Diabetes Engineering and Technology Female Health aspects Health care Health care industry Health services Humans Imaging systems Intervention Kidney Calculi - surgery Kidney Calculi - therapy Kidney stones Kidneys Lasers Lithotripsy Lithotripsy - adverse effects Lithotripsy - methods Low back pain Male Medical equipment Medical instruments Medical personnel Medical records Medical research Medicine and Health Sciences Medicine, Experimental Middle Aged Nephrolithiasis Neural networks Neural Networks, Computer Neurons Noise control Noise prediction Noise reduction Patient outcomes Patients Physiological apparatus Predictions Prognosis Shock waves Treatment Outcome Ureteroscopy - adverse effects Ureteroscopy - methods Urinary tract Urination Urine Variables Vomiting |
title | Stone decision engine accurately predicts stone removal and treatment complications for shock wave lithotripsy and laser ureterorenoscopy patients |
url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2024-12-01T23%3A52%3A03IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-gale_plos_&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Stone%20decision%20engine%20accurately%20predicts%20stone%20removal%20and%20treatment%20complications%20for%20shock%20wave%20lithotripsy%20and%20laser%20ureterorenoscopy%20patients&rft.jtitle=PloS%20one&rft.au=Noble,%20Peter%20A&rft.date=2024-05-02&rft.volume=19&rft.issue=5&rft.spage=e0301812&rft.epage=e0301812&rft.pages=e0301812-e0301812&rft.issn=1932-6203&rft.eissn=1932-6203&rft_id=info:doi/10.1371/journal.pone.0301812&rft_dat=%3Cgale_plos_%3EA792379557%3C/gale_plos_%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=3069285388&rft_id=info:pmid/38696418&rft_galeid=A792379557&rft_doaj_id=oai_doaj_org_article_b9ac4c28aaed4df49000e76f2664c77d&rfr_iscdi=true |