Cryptococcus neoformans Slu7 ensures nuclear positioning during mitotic progression through RNA splicing
The position of the nucleus before it divides during mitosis is variable in different budding yeasts. Studies in the pathogenic intron-rich fungus Cryptococcus neoformans reveal that the nucleus moves entirely into the daughter bud before its division. Here, we report functions of a zinc finger moti...
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description | The position of the nucleus before it divides during mitosis is variable in different budding yeasts. Studies in the pathogenic intron-rich fungus Cryptococcus neoformans reveal that the nucleus moves entirely into the daughter bud before its division. Here, we report functions of a zinc finger motif containing spliceosome protein C. neoformans Slu7 (CnSlu7) in cell cycle progression. The budding yeast and fission yeast homologs of Slu7 have predominant roles for intron 3' splice site definition during pre-mRNA splicing. Using a conditional knockdown strategy, we show CnSlu7 is an essential factor for viability and is required for efficient cell cycle progression with major role during mitosis. Aberrant nuclear migration, including improper positioning of the nucleus as well as the spindle, were frequently observed in cells depleted of CnSlu7. However, cell cycle delays observed due to Slu7 depletion did not activate the Mad2-dependent spindle assembly checkpoint (SAC). Mining of the global transcriptome changes in the Slu7 knockdown strain identified downregulation of transcripts encoding several cell cycle regulators and cytoskeletal factors for nuclear migration, and the splicing of specific introns of these genes was CnSlu7 dependent. To test the importance of splicing activity of CnSlu7 on nuclear migration, we complemented Slu7 knockdown cells with an intron less PAC1 minigene and demonstrated that the nuclear migration defects were significantly rescued. These findings show that CnSlu7 regulates the functions of diverse cell cycle regulators and cytoskeletal components, ensuring timely cell cycle transitions and nuclear division during mitosis. |
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Studies in the pathogenic intron-rich fungus Cryptococcus neoformans reveal that the nucleus moves entirely into the daughter bud before its division. Here, we report functions of a zinc finger motif containing spliceosome protein C. neoformans Slu7 (CnSlu7) in cell cycle progression. The budding yeast and fission yeast homologs of Slu7 have predominant roles for intron 3' splice site definition during pre-mRNA splicing. Using a conditional knockdown strategy, we show CnSlu7 is an essential factor for viability and is required for efficient cell cycle progression with major role during mitosis. Aberrant nuclear migration, including improper positioning of the nucleus as well as the spindle, were frequently observed in cells depleted of CnSlu7. However, cell cycle delays observed due to Slu7 depletion did not activate the Mad2-dependent spindle assembly checkpoint (SAC). Mining of the global transcriptome changes in the Slu7 knockdown strain identified downregulation of transcripts encoding several cell cycle regulators and cytoskeletal factors for nuclear migration, and the splicing of specific introns of these genes was CnSlu7 dependent. To test the importance of splicing activity of CnSlu7 on nuclear migration, we complemented Slu7 knockdown cells with an intron less PAC1 minigene and demonstrated that the nuclear migration defects were significantly rescued. These findings show that CnSlu7 regulates the functions of diverse cell cycle regulators and cytoskeletal components, ensuring timely cell cycle transitions and nuclear division during mitosis.</description><identifier>ISSN: 1553-7404</identifier><identifier>ISSN: 1553-7390</identifier><identifier>EISSN: 1553-7404</identifier><identifier>DOI: 10.1371/journal.pgen.1011272</identifier><identifier>PMID: 38768219</identifier><language>eng</language><publisher>United States: Public Library of Science</publisher><subject>Analysis ; Cell cycle ; Cell Cycle - genetics ; Cell division ; Cell Nucleus - genetics ; Cell Nucleus - metabolism ; Chromosomes ; Cryptococcus ; Cryptococcus neoformans ; Cryptococcus neoformans - genetics ; Cytoskeleton ; DNA binding proteins ; Flow cytometry ; Fungal Proteins - genetics ; Fungal Proteins - metabolism ; Fungi ; Gene expression ; Gene Expression Regulation, Fungal ; Genetic aspects ; Genomes ; Glucose ; Identification and classification ; Introns ; Maximum likelihood method ; Mitosis ; Mitosis - genetics ; Nuclear division ; PAC1 protein ; Protein C ; Proteins ; RNA ; RNA splicing ; RNA Splicing - genetics ; Roles ; Spindle Apparatus - genetics ; Spindle Apparatus - metabolism ; Spliceosomes - genetics ; Spliceosomes - metabolism ; Splicing ; Transcriptomes ; Yeast ; Zinc finger proteins</subject><ispartof>PLoS genetics, 2024-05, Vol.20 (5), p.e1011272</ispartof><rights>Copyright: © 2024 Krishnan et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.</rights><rights>COPYRIGHT 2024 Public Library of Science</rights><rights>2024 Krishnan et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>2024 Krishnan et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c620t-e0f2acee20c77d1c86176000a3a5523e9ac250c1a749b03c49c0a0615c6b95983</cites><orcidid>0000-0003-2499-863X ; 0000-0001-8572-2886 ; 0000-0003-3060-625X</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://journals.plos.org/plosone/article/file?id=10.1371/journal.pgen.1011272&type=printable$$EPDF$$P50$$Gplos$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://journals.plos.org/plosone/article?id=10.1371/journal.pgen.1011272$$EHTML$$P50$$Gplos$$Hfree_for_read</linktohtml><link.rule.ids>314,776,780,860,2095,2914,23846,27903,27904,79346,79347</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/38768219$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><contributor>Haase, Steven B.</contributor><creatorcontrib>Krishnan, Vishnu Priya</creatorcontrib><creatorcontrib>Negi, Manendra Singh</creatorcontrib><creatorcontrib>Peesapati, Raghavaram</creatorcontrib><creatorcontrib>Vijayraghavan, Usha</creatorcontrib><title>Cryptococcus neoformans Slu7 ensures nuclear positioning during mitotic progression through RNA splicing</title><title>PLoS genetics</title><addtitle>PLoS Genet</addtitle><description>The position of the nucleus before it divides during mitosis is variable in different budding yeasts. Studies in the pathogenic intron-rich fungus Cryptococcus neoformans reveal that the nucleus moves entirely into the daughter bud before its division. Here, we report functions of a zinc finger motif containing spliceosome protein C. neoformans Slu7 (CnSlu7) in cell cycle progression. The budding yeast and fission yeast homologs of Slu7 have predominant roles for intron 3' splice site definition during pre-mRNA splicing. Using a conditional knockdown strategy, we show CnSlu7 is an essential factor for viability and is required for efficient cell cycle progression with major role during mitosis. Aberrant nuclear migration, including improper positioning of the nucleus as well as the spindle, were frequently observed in cells depleted of CnSlu7. However, cell cycle delays observed due to Slu7 depletion did not activate the Mad2-dependent spindle assembly checkpoint (SAC). Mining of the global transcriptome changes in the Slu7 knockdown strain identified downregulation of transcripts encoding several cell cycle regulators and cytoskeletal factors for nuclear migration, and the splicing of specific introns of these genes was CnSlu7 dependent. To test the importance of splicing activity of CnSlu7 on nuclear migration, we complemented Slu7 knockdown cells with an intron less PAC1 minigene and demonstrated that the nuclear migration defects were significantly rescued. 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Academic</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>PLoS genetics</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Krishnan, Vishnu Priya</au><au>Negi, Manendra Singh</au><au>Peesapati, Raghavaram</au><au>Vijayraghavan, Usha</au><au>Haase, Steven B.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Cryptococcus neoformans Slu7 ensures nuclear positioning during mitotic progression through RNA splicing</atitle><jtitle>PLoS genetics</jtitle><addtitle>PLoS Genet</addtitle><date>2024-05-20</date><risdate>2024</risdate><volume>20</volume><issue>5</issue><spage>e1011272</spage><pages>e1011272-</pages><issn>1553-7404</issn><issn>1553-7390</issn><eissn>1553-7404</eissn><abstract>The position of the nucleus before it divides during mitosis is variable in different budding yeasts. Studies in the pathogenic intron-rich fungus Cryptococcus neoformans reveal that the nucleus moves entirely into the daughter bud before its division. Here, we report functions of a zinc finger motif containing spliceosome protein C. neoformans Slu7 (CnSlu7) in cell cycle progression. The budding yeast and fission yeast homologs of Slu7 have predominant roles for intron 3' splice site definition during pre-mRNA splicing. Using a conditional knockdown strategy, we show CnSlu7 is an essential factor for viability and is required for efficient cell cycle progression with major role during mitosis. Aberrant nuclear migration, including improper positioning of the nucleus as well as the spindle, were frequently observed in cells depleted of CnSlu7. However, cell cycle delays observed due to Slu7 depletion did not activate the Mad2-dependent spindle assembly checkpoint (SAC). Mining of the global transcriptome changes in the Slu7 knockdown strain identified downregulation of transcripts encoding several cell cycle regulators and cytoskeletal factors for nuclear migration, and the splicing of specific introns of these genes was CnSlu7 dependent. To test the importance of splicing activity of CnSlu7 on nuclear migration, we complemented Slu7 knockdown cells with an intron less PAC1 minigene and demonstrated that the nuclear migration defects were significantly rescued. These findings show that CnSlu7 regulates the functions of diverse cell cycle regulators and cytoskeletal components, ensuring timely cell cycle transitions and nuclear division during mitosis.</abstract><cop>United States</cop><pub>Public Library of Science</pub><pmid>38768219</pmid><doi>10.1371/journal.pgen.1011272</doi><tpages>e1011272</tpages><orcidid>https://orcid.org/0000-0003-2499-863X</orcidid><orcidid>https://orcid.org/0000-0001-8572-2886</orcidid><orcidid>https://orcid.org/0000-0003-3060-625X</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Analysis Cell cycle Cell Cycle - genetics Cell division Cell Nucleus - genetics Cell Nucleus - metabolism Chromosomes Cryptococcus Cryptococcus neoformans Cryptococcus neoformans - genetics Cytoskeleton DNA binding proteins Flow cytometry Fungal Proteins - genetics Fungal Proteins - metabolism Fungi Gene expression Gene Expression Regulation, Fungal Genetic aspects Genomes Glucose Identification and classification Introns Maximum likelihood method Mitosis Mitosis - genetics Nuclear division PAC1 protein Protein C Proteins RNA RNA splicing RNA Splicing - genetics Roles Spindle Apparatus - genetics Spindle Apparatus - metabolism Spliceosomes - genetics Spliceosomes - metabolism Splicing Transcriptomes Yeast Zinc finger proteins |
title | Cryptococcus neoformans Slu7 ensures nuclear positioning during mitotic progression through RNA splicing |
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