SEC14-like condensate phase transitions at plasma membranes regulate root growth in Arabidopsis
Protein function can be modulated by phase transitions in their material properties, which can range from liquid- to solid-like; yet, the mechanisms that drive these transitions and whether they are important for physiology are still unknown. In the model plant Arabidopsis, we show that developmenta...
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creator | Liu, Chen Mentzelopoulou, Andriani Papagavriil, Fotini Ramachandran, Prashanth Perraki, Artemis Claus, Lucas Barg, Sebastian Dörmann, Peter Jaillais, Yvon Johnen, Philipp Russinova, Eugenia Gizeli, Electra Schaaf, Gabriel Moschou, Panagiotis Nikolaou |
description | Protein function can be modulated by phase transitions in their material properties, which can range from liquid- to solid-like; yet, the mechanisms that drive these transitions and whether they are important for physiology are still unknown. In the model plant Arabidopsis, we show that developmental robustness is reinforced by phase transitions of the plasma membrane-bound lipid-binding protein SEC14-like. Using imaging, genetics, and in vitro reconstitution experiments, we show that SEC14-like undergoes liquid-like phase separation in the root stem cells. Outside the stem cell niche, SEC14-like associates with the caspase-like protease separase and conserved microtubule motors at unique polar plasma membrane interfaces. In these interfaces, SEC14-like undergoes processing by separase, which promotes its liquid-to-solid transition. This transition is important for root development, as lines expressing an uncleavable SEC14-like variant or mutants of separase and associated microtubule motors show similar developmental phenotypes. Furthermore, the processed and solidified but not the liquid form of SEC14-like interacts with and regulates the polarity of the auxin efflux carrier PINFORMED2. This work demonstrates that robust development can involve liquid-to-solid transitions mediated by proteolysis at unique plasma membrane interfaces. |
doi_str_mv | 10.1371/journal.pbio.3002305 |
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In the model plant Arabidopsis, we show that developmental robustness is reinforced by phase transitions of the plasma membrane-bound lipid-binding protein SEC14-like. Using imaging, genetics, and in vitro reconstitution experiments, we show that SEC14-like undergoes liquid-like phase separation in the root stem cells. Outside the stem cell niche, SEC14-like associates with the caspase-like protease separase and conserved microtubule motors at unique polar plasma membrane interfaces. In these interfaces, SEC14-like undergoes processing by separase, which promotes its liquid-to-solid transition. This transition is important for root development, as lines expressing an uncleavable SEC14-like variant or mutants of separase and associated microtubule motors show similar developmental phenotypes. Furthermore, the processed and solidified but not the liquid form of SEC14-like interacts with and regulates the polarity of the auxin efflux carrier PINFORMED2. This work demonstrates that robust development can involve liquid-to-solid transitions mediated by proteolysis at unique plasma membrane interfaces.</description><identifier>ISSN: 1545-7885</identifier><identifier>ISSN: 1544-9173</identifier><identifier>EISSN: 1545-7885</identifier><identifier>DOI: 10.1371/journal.pbio.3002305</identifier><identifier>PMID: 37721949</identifier><language>eng</language><publisher>San Francisco: Public Library of Science</publisher><subject>Analysis ; Arabidopsis ; Arabidopsis thaliana ; Biochemistry and Molecular Biology ; Biokemi och molekylärbiologi ; Biology and Life Sciences ; Botanics ; Caspase ; Development Biology ; Efflux ; Experiments ; Genetic aspects ; Genetics ; Identification and classification ; Interfaces ; Life Sciences ; Lipid-binding protein ; Lipids ; Localization ; Material properties ; Medicine and Health Sciences ; Membrane proteins ; Membranes ; Motors ; Phase separation ; Phase transitions ; Phenotypes ; Plant Biotechnology ; Plant growth ; Plasma ; Plasma membranes ; Properties ; Proteins ; Proteolysis ; Research and Analysis Methods ; Root development ; Separase ; Stem cells ; Vegetal Biology ; Växtbioteknologi</subject><ispartof>PLoS biology, 2023-09, Vol.21 (9), p.e3002305-e3002305</ispartof><rights>COPYRIGHT 2023 Public Library of Science</rights><rights>2023 Liu et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>Attribution</rights><rights>2023 Liu et al 2023 Liu et al</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c783t-bd22c5a69da5cccfdad9fd3c96a535ec74c77a56f5f31a633c1f1ce06928822a3</citedby><cites>FETCH-LOGICAL-c783t-bd22c5a69da5cccfdad9fd3c96a535ec74c77a56f5f31a633c1f1ce06928822a3</cites><orcidid>0000-0001-7212-0595 ; 0000-0003-4923-883X</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC10538751/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC10538751/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,552,727,780,784,864,885,2102,2928,23866,27924,27925,53791,53793</link.rule.ids><backlink>$$Uhttps://hal.science/hal-04237928$$DView record in HAL$$Hfree_for_read</backlink><backlink>$$Uhttps://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-513339$$DView record from Swedish Publication Index$$Hfree_for_read</backlink><backlink>$$Uhttps://res.slu.se/id/publ/126444$$DView record from Swedish Publication Index$$Hfree_for_read</backlink></links><search><contributor>Estelle, Mark</contributor><creatorcontrib>Liu, Chen</creatorcontrib><creatorcontrib>Mentzelopoulou, Andriani</creatorcontrib><creatorcontrib>Papagavriil, Fotini</creatorcontrib><creatorcontrib>Ramachandran, Prashanth</creatorcontrib><creatorcontrib>Perraki, Artemis</creatorcontrib><creatorcontrib>Claus, Lucas</creatorcontrib><creatorcontrib>Barg, Sebastian</creatorcontrib><creatorcontrib>Dörmann, Peter</creatorcontrib><creatorcontrib>Jaillais, Yvon</creatorcontrib><creatorcontrib>Johnen, Philipp</creatorcontrib><creatorcontrib>Russinova, Eugenia</creatorcontrib><creatorcontrib>Gizeli, Electra</creatorcontrib><creatorcontrib>Schaaf, Gabriel</creatorcontrib><creatorcontrib>Moschou, Panagiotis Nikolaou</creatorcontrib><creatorcontrib>Sveriges lantbruksuniversitet</creatorcontrib><title>SEC14-like condensate phase transitions at plasma membranes regulate root growth in Arabidopsis</title><title>PLoS biology</title><description>Protein function can be modulated by phase transitions in their material properties, which can range from liquid- to solid-like; yet, the mechanisms that drive these transitions and whether they are important for physiology are still unknown. In the model plant Arabidopsis, we show that developmental robustness is reinforced by phase transitions of the plasma membrane-bound lipid-binding protein SEC14-like. Using imaging, genetics, and in vitro reconstitution experiments, we show that SEC14-like undergoes liquid-like phase separation in the root stem cells. Outside the stem cell niche, SEC14-like associates with the caspase-like protease separase and conserved microtubule motors at unique polar plasma membrane interfaces. In these interfaces, SEC14-like undergoes processing by separase, which promotes its liquid-to-solid transition. This transition is important for root development, as lines expressing an uncleavable SEC14-like variant or mutants of separase and associated microtubule motors show similar developmental phenotypes. Furthermore, the processed and solidified but not the liquid form of SEC14-like interacts with and regulates the polarity of the auxin efflux carrier PINFORMED2. This work demonstrates that robust development can involve liquid-to-solid transitions mediated by proteolysis at unique plasma membrane interfaces.</description><subject>Analysis</subject><subject>Arabidopsis</subject><subject>Arabidopsis thaliana</subject><subject>Biochemistry and Molecular Biology</subject><subject>Biokemi och molekylärbiologi</subject><subject>Biology and Life Sciences</subject><subject>Botanics</subject><subject>Caspase</subject><subject>Development Biology</subject><subject>Efflux</subject><subject>Experiments</subject><subject>Genetic aspects</subject><subject>Genetics</subject><subject>Identification and classification</subject><subject>Interfaces</subject><subject>Life Sciences</subject><subject>Lipid-binding protein</subject><subject>Lipids</subject><subject>Localization</subject><subject>Material properties</subject><subject>Medicine and Health Sciences</subject><subject>Membrane proteins</subject><subject>Membranes</subject><subject>Motors</subject><subject>Phase separation</subject><subject>Phase transitions</subject><subject>Phenotypes</subject><subject>Plant Biotechnology</subject><subject>Plant growth</subject><subject>Plasma</subject><subject>Plasma membranes</subject><subject>Properties</subject><subject>Proteins</subject><subject>Proteolysis</subject><subject>Research and Analysis Methods</subject><subject>Root development</subject><subject>Separase</subject><subject>Stem cells</subject><subject>Vegetal 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condensate phase transitions at plasma membranes regulate root growth in Arabidopsis</title><author>Liu, Chen ; Mentzelopoulou, Andriani ; Papagavriil, Fotini ; Ramachandran, Prashanth ; Perraki, Artemis ; Claus, Lucas ; Barg, Sebastian ; Dörmann, Peter ; Jaillais, Yvon ; Johnen, Philipp ; Russinova, Eugenia ; Gizeli, Electra ; Schaaf, Gabriel ; Moschou, Panagiotis Nikolaou</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c783t-bd22c5a69da5cccfdad9fd3c96a535ec74c77a56f5f31a633c1f1ce06928822a3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2023</creationdate><topic>Analysis</topic><topic>Arabidopsis</topic><topic>Arabidopsis thaliana</topic><topic>Biochemistry and Molecular Biology</topic><topic>Biokemi och molekylärbiologi</topic><topic>Biology and Life Sciences</topic><topic>Botanics</topic><topic>Caspase</topic><topic>Development Biology</topic><topic>Efflux</topic><topic>Experiments</topic><topic>Genetic aspects</topic><topic>Genetics</topic><topic>Identification and classification</topic><topic>Interfaces</topic><topic>Life Sciences</topic><topic>Lipid-binding protein</topic><topic>Lipids</topic><topic>Localization</topic><topic>Material properties</topic><topic>Medicine and Health Sciences</topic><topic>Membrane proteins</topic><topic>Membranes</topic><topic>Motors</topic><topic>Phase separation</topic><topic>Phase transitions</topic><topic>Phenotypes</topic><topic>Plant Biotechnology</topic><topic>Plant growth</topic><topic>Plasma</topic><topic>Plasma membranes</topic><topic>Properties</topic><topic>Proteins</topic><topic>Proteolysis</topic><topic>Research and Analysis Methods</topic><topic>Root development</topic><topic>Separase</topic><topic>Stem cells</topic><topic>Vegetal 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Mark</au><aucorp>Sveriges lantbruksuniversitet</aucorp><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>SEC14-like condensate phase transitions at plasma membranes regulate root growth in Arabidopsis</atitle><jtitle>PLoS biology</jtitle><date>2023-09-18</date><risdate>2023</risdate><volume>21</volume><issue>9</issue><spage>e3002305</spage><epage>e3002305</epage><pages>e3002305-e3002305</pages><issn>1545-7885</issn><issn>1544-9173</issn><eissn>1545-7885</eissn><abstract>Protein function can be modulated by phase transitions in their material properties, which can range from liquid- to solid-like; yet, the mechanisms that drive these transitions and whether they are important for physiology are still unknown. In the model plant Arabidopsis, we show that developmental robustness is reinforced by phase transitions of the plasma membrane-bound lipid-binding protein SEC14-like. Using imaging, genetics, and in vitro reconstitution experiments, we show that SEC14-like undergoes liquid-like phase separation in the root stem cells. Outside the stem cell niche, SEC14-like associates with the caspase-like protease separase and conserved microtubule motors at unique polar plasma membrane interfaces. In these interfaces, SEC14-like undergoes processing by separase, which promotes its liquid-to-solid transition. This transition is important for root development, as lines expressing an uncleavable SEC14-like variant or mutants of separase and associated microtubule motors show similar developmental phenotypes. Furthermore, the processed and solidified but not the liquid form of SEC14-like interacts with and regulates the polarity of the auxin efflux carrier PINFORMED2. This work demonstrates that robust development can involve liquid-to-solid transitions mediated by proteolysis at unique plasma membrane interfaces.</abstract><cop>San Francisco</cop><pub>Public Library of Science</pub><pmid>37721949</pmid><doi>10.1371/journal.pbio.3002305</doi><orcidid>https://orcid.org/0000-0001-7212-0595</orcidid><orcidid>https://orcid.org/0000-0003-4923-883X</orcidid><oa>free_for_read</oa></addata></record> |
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source | DOAJ Directory of Open Access Journals; SWEPUB Freely available online; Public Library of Science (PLoS) Journals Open Access; EZB-FREE-00999 freely available EZB journals; PubMed Central |
subjects | Analysis Arabidopsis Arabidopsis thaliana Biochemistry and Molecular Biology Biokemi och molekylärbiologi Biology and Life Sciences Botanics Caspase Development Biology Efflux Experiments Genetic aspects Genetics Identification and classification Interfaces Life Sciences Lipid-binding protein Lipids Localization Material properties Medicine and Health Sciences Membrane proteins Membranes Motors Phase separation Phase transitions Phenotypes Plant Biotechnology Plant growth Plasma Plasma membranes Properties Proteins Proteolysis Research and Analysis Methods Root development Separase Stem cells Vegetal Biology Växtbioteknologi |
title | SEC14-like condensate phase transitions at plasma membranes regulate root growth in Arabidopsis |
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