Effects of nitrogen reduction combined with bio-organic fertilizer on soil bacterial community diversity of red raspberry orchard
Understanding soil bacterial diversity under nitrogen reduction is necessary for the crucial role in soil nitrogen cycling. However, the effects of combined fertilization on soil chemical properties, microbial community structure, and yield are unknown. This study was conducted to investigate the ef...
Gespeichert in:
Veröffentlicht in: | PloS one 2023-07, Vol.18 (7), p.e0283718-e0283718 |
---|---|
Hauptverfasser: | , , , , , , , |
Format: | Artikel |
Sprache: | eng |
Schlagworte: | |
Online-Zugang: | Volltext |
Tags: |
Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
|
container_end_page | e0283718 |
---|---|
container_issue | 7 |
container_start_page | e0283718 |
container_title | PloS one |
container_volume | 18 |
creator | Yuan, Xu Zhang, Jiaan Chang, Feiyang Wang, Xinyue Zhang, Xuemei Luan, Haoan Qi, Guohui Guo, Suping |
description | Understanding soil bacterial diversity under nitrogen reduction is necessary for the crucial role in soil nitrogen cycling. However, the effects of combined fertilization on soil chemical properties, microbial community structure, and yield are unknown. This study was conducted to investigate the effect of nitrogen fertilizer reduction with bio-organic fertilizer on soil bacterial community diversity of red raspberry orchard. Six treatments were set in this study: NF-100%, NF-75%, NF-50%, NF-25% and CF, no nitrogen fertilizer and bio-organic fertilizer for CK. The bacterial community structures of soil were analyzed by 16S rRNA gene amplification high-throughput sequencing technology. Nitrogen fertilizer reduction with bio-organic fertilizer increased soil organic matter (SOM), total nitrogen (TN), alkali-hydrolyzable nitrogen (AN), available phosphorus (AP), available potassium (AK), and reduced soil pH. NF-50% and NF-25% treatments increased the yield of red raspberry. Nitrogen reduction combined with bio-organic fertilizer increased the relative abundance of copiotrophic bacteria and decreased the relative abundance of oligotrophic bacteria. The increase in copiotrophic bacteria in the soil of red raspberry orchard could indicate an increase in soil nutrient availability, which have positive implications for soil fertility and production. However, nitrogen fertilizer reduction with bio-organic fertilizer altered the abundance and diversity of soil bacteria, which was reduced compared to CF treatments. The PCoA analysis of the soil bacterial community showed that the community structure of NF-25% treatment was more different from other treatments, indicating that the fertilization method changed the community structure of soil bacteria. The results of a redundancy analysis showed that SOM, pH, AN, TN, and AP were the main factors affecting the microbial community structure. Overall, the reduction of nitrogen fertilizer with bio-organic fertilizer significantly increased the soil nutrient content, reduced the relative abundance and diversity of soil bacteria, increased the relative abundance of beneficial bacteria in the soil, changed the bacterial community structure of soil, increased production and created suitable soil conditions for the red raspberry growth. |
doi_str_mv | 10.1371/journal.pone.0283718 |
format | Article |
fullrecord | <record><control><sourceid>gale_plos_</sourceid><recordid>TN_cdi_plos_journals_2835856056</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><galeid>A756792511</galeid><sourcerecordid>A756792511</sourcerecordid><originalsourceid>FETCH-LOGICAL-c627t-f25fd472cae37138ee29301548a57b2a1bf3eaf8869ca3cb78a57455eafa385c3</originalsourceid><addsrcrecordid>eNqNkt1r1jAYxYso7kP_A9GAMPSir23S9ONKxpg6GAz8ug1p-qTNSJN3STqdd_7npq4bb2UX0ouG0985T_v0JMmLPNvkpMrfXdrJGa43W2tgk-E6avWjZD9vCE5LnJHHO-e95MD7yyyjpC7Lp8keqQqCm7LaT36fSgkieGQlMio424NBDrpJBGUNEnZslYEO_VBhQK2yqXU9N0ogCS4orX6BQ5HzVmnUchHAKa5n2zjFuBvUqWtwfj7FATEXOe63LTgXBScG7rpnyRPJtYfny_0w-fbh9OvJp_T84uPZyfF5KkpchVRiKruiwoJD_FJSA-CGZDktak6rFvO8lQS4rOuyEZyItpr1gtKocVJTQQ6TV7e5W209W7bnWVwcrWmZ0TIS7xdiakfoBJjguGZbp0bubpjliq2fGDWw3l6zPCOEllUdE94sCc5eTeADG5UXoDU3YKe_w0rcxHkz-vof9OFXWqiea2DKSBsHizmUHVdxZINpnkdq8wAVrw5GJWI_pIr6yvB2ZYhMgJ-h55P37OzL5_9nL76v2aMddgCuw-CtnuYu-TVY3ILCWe8dyPst5xmb6323DTbXmy31jraXu3_o3nTXZ_IHO9X4Xg</addsrcrecordid><sourcetype>Open Website</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>2835856056</pqid></control><display><type>article</type><title>Effects of nitrogen reduction combined with bio-organic fertilizer on soil bacterial community diversity of red raspberry orchard</title><source>MEDLINE</source><source>DOAJ Directory of Open Access Journals</source><source>Public Library of Science (PLoS) Journals Open Access</source><source>EZB-FREE-00999 freely available EZB journals</source><source>PubMed Central</source><source>Free Full-Text Journals in Chemistry</source><creator>Yuan, Xu ; Zhang, Jiaan ; Chang, Feiyang ; Wang, Xinyue ; Zhang, Xuemei ; Luan, Haoan ; Qi, Guohui ; Guo, Suping</creator><contributor>Vergine, Marzia</contributor><creatorcontrib>Yuan, Xu ; Zhang, Jiaan ; Chang, Feiyang ; Wang, Xinyue ; Zhang, Xuemei ; Luan, Haoan ; Qi, Guohui ; Guo, Suping ; Vergine, Marzia</creatorcontrib><description>Understanding soil bacterial diversity under nitrogen reduction is necessary for the crucial role in soil nitrogen cycling. However, the effects of combined fertilization on soil chemical properties, microbial community structure, and yield are unknown. This study was conducted to investigate the effect of nitrogen fertilizer reduction with bio-organic fertilizer on soil bacterial community diversity of red raspberry orchard. Six treatments were set in this study: NF-100%, NF-75%, NF-50%, NF-25% and CF, no nitrogen fertilizer and bio-organic fertilizer for CK. The bacterial community structures of soil were analyzed by 16S rRNA gene amplification high-throughput sequencing technology. Nitrogen fertilizer reduction with bio-organic fertilizer increased soil organic matter (SOM), total nitrogen (TN), alkali-hydrolyzable nitrogen (AN), available phosphorus (AP), available potassium (AK), and reduced soil pH. NF-50% and NF-25% treatments increased the yield of red raspberry. Nitrogen reduction combined with bio-organic fertilizer increased the relative abundance of copiotrophic bacteria and decreased the relative abundance of oligotrophic bacteria. The increase in copiotrophic bacteria in the soil of red raspberry orchard could indicate an increase in soil nutrient availability, which have positive implications for soil fertility and production. However, nitrogen fertilizer reduction with bio-organic fertilizer altered the abundance and diversity of soil bacteria, which was reduced compared to CF treatments. The PCoA analysis of the soil bacterial community showed that the community structure of NF-25% treatment was more different from other treatments, indicating that the fertilization method changed the community structure of soil bacteria. The results of a redundancy analysis showed that SOM, pH, AN, TN, and AP were the main factors affecting the microbial community structure. Overall, the reduction of nitrogen fertilizer with bio-organic fertilizer significantly increased the soil nutrient content, reduced the relative abundance and diversity of soil bacteria, increased the relative abundance of beneficial bacteria in the soil, changed the bacterial community structure of soil, increased production and created suitable soil conditions for the red raspberry growth.</description><identifier>ISSN: 1932-6203</identifier><identifier>EISSN: 1932-6203</identifier><identifier>DOI: 10.1371/journal.pone.0283718</identifier><identifier>PMID: 37432967</identifier><language>eng</language><publisher>United States: Public Library of Science</publisher><subject>Abundance ; Agricultural production ; Alkalies ; Analysis ; Availability ; Bacteria ; Bacteria - genetics ; Biology and Life Sciences ; Chemical properties ; Community structure ; Data analysis ; Earth Sciences ; Ecology and Environmental Sciences ; Environmental aspects ; Fertilization ; Fertilizer use reduction ; Fertilizers ; Fruits ; Gene amplification ; Gene sequencing ; Genetic aspects ; Genetic testing ; Growth ; Leaves ; Microbiomes ; Microorganisms ; Next-generation sequencing ; Nitrogen ; Nitrogen cycle ; Nitrogen fertilizers ; Nutrient availability ; Nutrient content ; Nutrients ; Oligotrophic microorganisms ; Organic fertilizers ; Organic matter ; Organic phosphorus ; Organic soils ; Phosphorus ; Physical Sciences ; Plant resistance ; Potassium ; Probiotics ; Product development ; Raspberries ; Reduction ; Redundancy ; Relative abundance ; RNA ; RNA, Ribosomal, 16S - genetics ; rRNA 16S ; Rubus ; Rubus idaeus strigosus ; Soil acidity ; Soil analysis ; Soil bacteria ; Soil chemistry ; Soil conditions ; Soil fertility ; Soil microbiology ; Soil microorganisms ; Soil nutrients ; Soil organic matter ; Soil pH ; Soil properties ; Soil sciences ; Soil structure ; Taxonomy ; Thermal cycling ; Variance analysis</subject><ispartof>PloS one, 2023-07, Vol.18 (7), p.e0283718-e0283718</ispartof><rights>Copyright: © 2023 Yuan et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.</rights><rights>COPYRIGHT 2023 Public Library of Science</rights><rights>2023 Yuan et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>2023 Yuan et al 2023 Yuan et al</rights><rights>2023 Yuan et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c627t-f25fd472cae37138ee29301548a57b2a1bf3eaf8869ca3cb78a57455eafa385c3</citedby><cites>FETCH-LOGICAL-c627t-f25fd472cae37138ee29301548a57b2a1bf3eaf8869ca3cb78a57455eafa385c3</cites><orcidid>0000-0002-8912-4880</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC10335678/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC10335678/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,864,885,2928,23866,27924,27925,53791,53793,79600,79601</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/37432967$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><contributor>Vergine, Marzia</contributor><creatorcontrib>Yuan, Xu</creatorcontrib><creatorcontrib>Zhang, Jiaan</creatorcontrib><creatorcontrib>Chang, Feiyang</creatorcontrib><creatorcontrib>Wang, Xinyue</creatorcontrib><creatorcontrib>Zhang, Xuemei</creatorcontrib><creatorcontrib>Luan, Haoan</creatorcontrib><creatorcontrib>Qi, Guohui</creatorcontrib><creatorcontrib>Guo, Suping</creatorcontrib><title>Effects of nitrogen reduction combined with bio-organic fertilizer on soil bacterial community diversity of red raspberry orchard</title><title>PloS one</title><addtitle>PLoS One</addtitle><description>Understanding soil bacterial diversity under nitrogen reduction is necessary for the crucial role in soil nitrogen cycling. However, the effects of combined fertilization on soil chemical properties, microbial community structure, and yield are unknown. This study was conducted to investigate the effect of nitrogen fertilizer reduction with bio-organic fertilizer on soil bacterial community diversity of red raspberry orchard. Six treatments were set in this study: NF-100%, NF-75%, NF-50%, NF-25% and CF, no nitrogen fertilizer and bio-organic fertilizer for CK. The bacterial community structures of soil were analyzed by 16S rRNA gene amplification high-throughput sequencing technology. Nitrogen fertilizer reduction with bio-organic fertilizer increased soil organic matter (SOM), total nitrogen (TN), alkali-hydrolyzable nitrogen (AN), available phosphorus (AP), available potassium (AK), and reduced soil pH. NF-50% and NF-25% treatments increased the yield of red raspberry. Nitrogen reduction combined with bio-organic fertilizer increased the relative abundance of copiotrophic bacteria and decreased the relative abundance of oligotrophic bacteria. The increase in copiotrophic bacteria in the soil of red raspberry orchard could indicate an increase in soil nutrient availability, which have positive implications for soil fertility and production. However, nitrogen fertilizer reduction with bio-organic fertilizer altered the abundance and diversity of soil bacteria, which was reduced compared to CF treatments. The PCoA analysis of the soil bacterial community showed that the community structure of NF-25% treatment was more different from other treatments, indicating that the fertilization method changed the community structure of soil bacteria. The results of a redundancy analysis showed that SOM, pH, AN, TN, and AP were the main factors affecting the microbial community structure. Overall, the reduction of nitrogen fertilizer with bio-organic fertilizer significantly increased the soil nutrient content, reduced the relative abundance and diversity of soil bacteria, increased the relative abundance of beneficial bacteria in the soil, changed the bacterial community structure of soil, increased production and created suitable soil conditions for the red raspberry growth.</description><subject>Abundance</subject><subject>Agricultural production</subject><subject>Alkalies</subject><subject>Analysis</subject><subject>Availability</subject><subject>Bacteria</subject><subject>Bacteria - genetics</subject><subject>Biology and Life Sciences</subject><subject>Chemical properties</subject><subject>Community structure</subject><subject>Data analysis</subject><subject>Earth Sciences</subject><subject>Ecology and Environmental Sciences</subject><subject>Environmental aspects</subject><subject>Fertilization</subject><subject>Fertilizer use reduction</subject><subject>Fertilizers</subject><subject>Fruits</subject><subject>Gene amplification</subject><subject>Gene sequencing</subject><subject>Genetic aspects</subject><subject>Genetic testing</subject><subject>Growth</subject><subject>Leaves</subject><subject>Microbiomes</subject><subject>Microorganisms</subject><subject>Next-generation sequencing</subject><subject>Nitrogen</subject><subject>Nitrogen cycle</subject><subject>Nitrogen fertilizers</subject><subject>Nutrient availability</subject><subject>Nutrient content</subject><subject>Nutrients</subject><subject>Oligotrophic microorganisms</subject><subject>Organic fertilizers</subject><subject>Organic matter</subject><subject>Organic phosphorus</subject><subject>Organic soils</subject><subject>Phosphorus</subject><subject>Physical Sciences</subject><subject>Plant resistance</subject><subject>Potassium</subject><subject>Probiotics</subject><subject>Product development</subject><subject>Raspberries</subject><subject>Reduction</subject><subject>Redundancy</subject><subject>Relative abundance</subject><subject>RNA</subject><subject>RNA, Ribosomal, 16S - genetics</subject><subject>rRNA 16S</subject><subject>Rubus</subject><subject>Rubus idaeus strigosus</subject><subject>Soil acidity</subject><subject>Soil analysis</subject><subject>Soil bacteria</subject><subject>Soil chemistry</subject><subject>Soil conditions</subject><subject>Soil fertility</subject><subject>Soil microbiology</subject><subject>Soil microorganisms</subject><subject>Soil nutrients</subject><subject>Soil organic matter</subject><subject>Soil pH</subject><subject>Soil properties</subject><subject>Soil sciences</subject><subject>Soil structure</subject><subject>Taxonomy</subject><subject>Thermal cycling</subject><subject>Variance analysis</subject><issn>1932-6203</issn><issn>1932-6203</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2023</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNqNkt1r1jAYxYso7kP_A9GAMPSir23S9ONKxpg6GAz8ug1p-qTNSJN3STqdd_7npq4bb2UX0ouG0985T_v0JMmLPNvkpMrfXdrJGa43W2tgk-E6avWjZD9vCE5LnJHHO-e95MD7yyyjpC7Lp8keqQqCm7LaT36fSgkieGQlMio424NBDrpJBGUNEnZslYEO_VBhQK2yqXU9N0ogCS4orX6BQ5HzVmnUchHAKa5n2zjFuBvUqWtwfj7FATEXOe63LTgXBScG7rpnyRPJtYfny_0w-fbh9OvJp_T84uPZyfF5KkpchVRiKruiwoJD_FJSA-CGZDktak6rFvO8lQS4rOuyEZyItpr1gtKocVJTQQ6TV7e5W209W7bnWVwcrWmZ0TIS7xdiakfoBJjguGZbp0bubpjliq2fGDWw3l6zPCOEllUdE94sCc5eTeADG5UXoDU3YKe_w0rcxHkz-vof9OFXWqiea2DKSBsHizmUHVdxZINpnkdq8wAVrw5GJWI_pIr6yvB2ZYhMgJ-h55P37OzL5_9nL76v2aMddgCuw-CtnuYu-TVY3ILCWe8dyPst5xmb6323DTbXmy31jraXu3_o3nTXZ_IHO9X4Xg</recordid><startdate>20230711</startdate><enddate>20230711</enddate><creator>Yuan, Xu</creator><creator>Zhang, Jiaan</creator><creator>Chang, Feiyang</creator><creator>Wang, Xinyue</creator><creator>Zhang, Xuemei</creator><creator>Luan, Haoan</creator><creator>Qi, Guohui</creator><creator>Guo, Suping</creator><general>Public Library of Science</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>IOV</scope><scope>ISR</scope><scope>3V.</scope><scope>7QG</scope><scope>7QL</scope><scope>7QO</scope><scope>7RV</scope><scope>7SN</scope><scope>7SS</scope><scope>7T5</scope><scope>7TG</scope><scope>7TM</scope><scope>7U9</scope><scope>7X2</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8AO</scope><scope>8C1</scope><scope>8FD</scope><scope>8FE</scope><scope>8FG</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABJCF</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>ARAPS</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BGLVJ</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>D1I</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>KB.</scope><scope>KB0</scope><scope>KL.</scope><scope>L6V</scope><scope>LK8</scope><scope>M0K</scope><scope>M0S</scope><scope>M1P</scope><scope>M7N</scope><scope>M7P</scope><scope>M7S</scope><scope>NAPCQ</scope><scope>P5Z</scope><scope>P62</scope><scope>P64</scope><scope>PATMY</scope><scope>PDBOC</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PTHSS</scope><scope>PYCSY</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0002-8912-4880</orcidid></search><sort><creationdate>20230711</creationdate><title>Effects of nitrogen reduction combined with bio-organic fertilizer on soil bacterial community diversity of red raspberry orchard</title><author>Yuan, Xu ; Zhang, Jiaan ; Chang, Feiyang ; Wang, Xinyue ; Zhang, Xuemei ; Luan, Haoan ; Qi, Guohui ; Guo, Suping</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c627t-f25fd472cae37138ee29301548a57b2a1bf3eaf8869ca3cb78a57455eafa385c3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2023</creationdate><topic>Abundance</topic><topic>Agricultural production</topic><topic>Alkalies</topic><topic>Analysis</topic><topic>Availability</topic><topic>Bacteria</topic><topic>Bacteria - genetics</topic><topic>Biology and Life Sciences</topic><topic>Chemical properties</topic><topic>Community structure</topic><topic>Data analysis</topic><topic>Earth Sciences</topic><topic>Ecology and Environmental Sciences</topic><topic>Environmental aspects</topic><topic>Fertilization</topic><topic>Fertilizer use reduction</topic><topic>Fertilizers</topic><topic>Fruits</topic><topic>Gene amplification</topic><topic>Gene sequencing</topic><topic>Genetic aspects</topic><topic>Genetic testing</topic><topic>Growth</topic><topic>Leaves</topic><topic>Microbiomes</topic><topic>Microorganisms</topic><topic>Next-generation sequencing</topic><topic>Nitrogen</topic><topic>Nitrogen cycle</topic><topic>Nitrogen fertilizers</topic><topic>Nutrient availability</topic><topic>Nutrient content</topic><topic>Nutrients</topic><topic>Oligotrophic microorganisms</topic><topic>Organic fertilizers</topic><topic>Organic matter</topic><topic>Organic phosphorus</topic><topic>Organic soils</topic><topic>Phosphorus</topic><topic>Physical Sciences</topic><topic>Plant resistance</topic><topic>Potassium</topic><topic>Probiotics</topic><topic>Product development</topic><topic>Raspberries</topic><topic>Reduction</topic><topic>Redundancy</topic><topic>Relative abundance</topic><topic>RNA</topic><topic>RNA, Ribosomal, 16S - genetics</topic><topic>rRNA 16S</topic><topic>Rubus</topic><topic>Rubus idaeus strigosus</topic><topic>Soil acidity</topic><topic>Soil analysis</topic><topic>Soil bacteria</topic><topic>Soil chemistry</topic><topic>Soil conditions</topic><topic>Soil fertility</topic><topic>Soil microbiology</topic><topic>Soil microorganisms</topic><topic>Soil nutrients</topic><topic>Soil organic matter</topic><topic>Soil pH</topic><topic>Soil properties</topic><topic>Soil sciences</topic><topic>Soil structure</topic><topic>Taxonomy</topic><topic>Thermal cycling</topic><topic>Variance analysis</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Yuan, Xu</creatorcontrib><creatorcontrib>Zhang, Jiaan</creatorcontrib><creatorcontrib>Chang, Feiyang</creatorcontrib><creatorcontrib>Wang, Xinyue</creatorcontrib><creatorcontrib>Zhang, Xuemei</creatorcontrib><creatorcontrib>Luan, Haoan</creatorcontrib><creatorcontrib>Qi, Guohui</creatorcontrib><creatorcontrib>Guo, Suping</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Gale In Context: Opposing Viewpoints</collection><collection>Gale In Context: Science</collection><collection>ProQuest Central (Corporate)</collection><collection>Animal Behavior Abstracts</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Biotechnology Research Abstracts</collection><collection>Nursing & Allied Health Database</collection><collection>Ecology Abstracts</collection><collection>Entomology Abstracts (Full archive)</collection><collection>Immunology Abstracts</collection><collection>Meteorological & Geoastrophysical Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Agricultural Science Collection</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Medical Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Public Health Database</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Technology Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>Materials Science & Engineering Collection</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>Advanced Technologies & Aerospace Collection</collection><collection>Agricultural & Environmental Science Collection</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Technology Collection</collection><collection>Natural Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Materials Science Collection</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Materials Science Database</collection><collection>Nursing & Allied Health Database (Alumni Edition)</collection><collection>Meteorological & Geoastrophysical Abstracts - Academic</collection><collection>ProQuest Engineering Collection</collection><collection>ProQuest Biological Science Collection</collection><collection>Agricultural Science Database</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biological Science Database</collection><collection>Engineering Database</collection><collection>Nursing & Allied Health Premium</collection><collection>Advanced Technologies & Aerospace Database</collection><collection>ProQuest Advanced Technologies & Aerospace Collection</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Environmental Science Database</collection><collection>Materials Science Collection</collection><collection>Publicly Available Content Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>Engineering Collection</collection><collection>Environmental Science Collection</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>PloS one</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Yuan, Xu</au><au>Zhang, Jiaan</au><au>Chang, Feiyang</au><au>Wang, Xinyue</au><au>Zhang, Xuemei</au><au>Luan, Haoan</au><au>Qi, Guohui</au><au>Guo, Suping</au><au>Vergine, Marzia</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Effects of nitrogen reduction combined with bio-organic fertilizer on soil bacterial community diversity of red raspberry orchard</atitle><jtitle>PloS one</jtitle><addtitle>PLoS One</addtitle><date>2023-07-11</date><risdate>2023</risdate><volume>18</volume><issue>7</issue><spage>e0283718</spage><epage>e0283718</epage><pages>e0283718-e0283718</pages><issn>1932-6203</issn><eissn>1932-6203</eissn><abstract>Understanding soil bacterial diversity under nitrogen reduction is necessary for the crucial role in soil nitrogen cycling. However, the effects of combined fertilization on soil chemical properties, microbial community structure, and yield are unknown. This study was conducted to investigate the effect of nitrogen fertilizer reduction with bio-organic fertilizer on soil bacterial community diversity of red raspberry orchard. Six treatments were set in this study: NF-100%, NF-75%, NF-50%, NF-25% and CF, no nitrogen fertilizer and bio-organic fertilizer for CK. The bacterial community structures of soil were analyzed by 16S rRNA gene amplification high-throughput sequencing technology. Nitrogen fertilizer reduction with bio-organic fertilizer increased soil organic matter (SOM), total nitrogen (TN), alkali-hydrolyzable nitrogen (AN), available phosphorus (AP), available potassium (AK), and reduced soil pH. NF-50% and NF-25% treatments increased the yield of red raspberry. Nitrogen reduction combined with bio-organic fertilizer increased the relative abundance of copiotrophic bacteria and decreased the relative abundance of oligotrophic bacteria. The increase in copiotrophic bacteria in the soil of red raspberry orchard could indicate an increase in soil nutrient availability, which have positive implications for soil fertility and production. However, nitrogen fertilizer reduction with bio-organic fertilizer altered the abundance and diversity of soil bacteria, which was reduced compared to CF treatments. The PCoA analysis of the soil bacterial community showed that the community structure of NF-25% treatment was more different from other treatments, indicating that the fertilization method changed the community structure of soil bacteria. The results of a redundancy analysis showed that SOM, pH, AN, TN, and AP were the main factors affecting the microbial community structure. Overall, the reduction of nitrogen fertilizer with bio-organic fertilizer significantly increased the soil nutrient content, reduced the relative abundance and diversity of soil bacteria, increased the relative abundance of beneficial bacteria in the soil, changed the bacterial community structure of soil, increased production and created suitable soil conditions for the red raspberry growth.</abstract><cop>United States</cop><pub>Public Library of Science</pub><pmid>37432967</pmid><doi>10.1371/journal.pone.0283718</doi><tpages>e0283718</tpages><orcidid>https://orcid.org/0000-0002-8912-4880</orcidid><oa>free_for_read</oa></addata></record> |
fulltext | fulltext |
identifier | ISSN: 1932-6203 |
ispartof | PloS one, 2023-07, Vol.18 (7), p.e0283718-e0283718 |
issn | 1932-6203 1932-6203 |
language | eng |
recordid | cdi_plos_journals_2835856056 |
source | MEDLINE; DOAJ Directory of Open Access Journals; Public Library of Science (PLoS) Journals Open Access; EZB-FREE-00999 freely available EZB journals; PubMed Central; Free Full-Text Journals in Chemistry |
subjects | Abundance Agricultural production Alkalies Analysis Availability Bacteria Bacteria - genetics Biology and Life Sciences Chemical properties Community structure Data analysis Earth Sciences Ecology and Environmental Sciences Environmental aspects Fertilization Fertilizer use reduction Fertilizers Fruits Gene amplification Gene sequencing Genetic aspects Genetic testing Growth Leaves Microbiomes Microorganisms Next-generation sequencing Nitrogen Nitrogen cycle Nitrogen fertilizers Nutrient availability Nutrient content Nutrients Oligotrophic microorganisms Organic fertilizers Organic matter Organic phosphorus Organic soils Phosphorus Physical Sciences Plant resistance Potassium Probiotics Product development Raspberries Reduction Redundancy Relative abundance RNA RNA, Ribosomal, 16S - genetics rRNA 16S Rubus Rubus idaeus strigosus Soil acidity Soil analysis Soil bacteria Soil chemistry Soil conditions Soil fertility Soil microbiology Soil microorganisms Soil nutrients Soil organic matter Soil pH Soil properties Soil sciences Soil structure Taxonomy Thermal cycling Variance analysis |
title | Effects of nitrogen reduction combined with bio-organic fertilizer on soil bacterial community diversity of red raspberry orchard |
url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2024-12-26T01%3A26%3A29IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-gale_plos_&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Effects%20of%20nitrogen%20reduction%20combined%20with%20bio-organic%20fertilizer%20on%20soil%20bacterial%20community%20diversity%20of%20red%20raspberry%20orchard&rft.jtitle=PloS%20one&rft.au=Yuan,%20Xu&rft.date=2023-07-11&rft.volume=18&rft.issue=7&rft.spage=e0283718&rft.epage=e0283718&rft.pages=e0283718-e0283718&rft.issn=1932-6203&rft.eissn=1932-6203&rft_id=info:doi/10.1371/journal.pone.0283718&rft_dat=%3Cgale_plos_%3EA756792511%3C/gale_plos_%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=2835856056&rft_id=info:pmid/37432967&rft_galeid=A756792511&rfr_iscdi=true |