The viral packaging motor potentiates Kaposi's sarcoma-associated herpesvirus gene expression late in infection
β- and γ-herpesviruses transcribe their late genes in a manner distinct from host transcription. This process is directed by a complex of viral transcriptional activator proteins that hijack cellular RNA polymerase II and an unknown set of additional factors. We employed proximity labeling coupled w...
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description | β- and γ-herpesviruses transcribe their late genes in a manner distinct from host transcription. This process is directed by a complex of viral transcriptional activator proteins that hijack cellular RNA polymerase II and an unknown set of additional factors. We employed proximity labeling coupled with mass spectrometry, followed by CRISPR and siRNA screening to identify proteins functionally associated with the Kaposi's sarcoma-associated herpesvirus (KSHV) late gene transcriptional complex. These data revealed that the catalytic subunit of the viral DNA packaging motor, ORF29, is both dynamically associated with the viral transcriptional activator complex and potentiates gene expression late in infection. Through genetic mutation and deletion of ORF29, we establish that its catalytic activity potentiates viral transcription and is required for robust accumulation of essential late proteins during infection. Thus, we propose an expanded role for ORF29 that encompasses its established function in viral packaging and its newly discovered contributions to viral transcription and late gene expression in KSHV. |
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This process is directed by a complex of viral transcriptional activator proteins that hijack cellular RNA polymerase II and an unknown set of additional factors. We employed proximity labeling coupled with mass spectrometry, followed by CRISPR and siRNA screening to identify proteins functionally associated with the Kaposi's sarcoma-associated herpesvirus (KSHV) late gene transcriptional complex. These data revealed that the catalytic subunit of the viral DNA packaging motor, ORF29, is both dynamically associated with the viral transcriptional activator complex and potentiates gene expression late in infection. Through genetic mutation and deletion of ORF29, we establish that its catalytic activity potentiates viral transcription and is required for robust accumulation of essential late proteins during infection. Thus, we propose an expanded role for ORF29 that encompasses its established function in viral packaging and its newly discovered contributions to viral transcription and late gene expression in KSHV.</description><identifier>ISSN: 1553-7374</identifier><identifier>ISSN: 1553-7366</identifier><identifier>EISSN: 1553-7374</identifier><identifier>DOI: 10.1371/journal.ppat.1011163</identifier><identifier>PMID: 37068108</identifier><language>eng</language><publisher>United States: Public Library of Science</publisher><subject>Analysis ; Artificial chromosomes ; Biology and life sciences ; Care and treatment ; Catalytic activity ; Complications and side effects ; CRISPR ; Cytomegalovirus ; Deoxyribonucleic acid ; DNA ; DNA-directed RNA polymerase ; Engineering and Technology ; Flow cytometry ; Gene deletion ; Gene Expression ; Gene Expression Regulation, Viral ; Genes ; Genetic aspects ; Genetic research ; Genetic screening ; Genetic transcription ; Genomes ; Health aspects ; Herpes ; Herpes viruses ; Herpesvirus 8, Human - genetics ; Herpesvirus 8, Human - metabolism ; Herpesvirus diseases ; Infection ; Infections ; Kaposi's sarcoma ; Kaposis sarcoma ; Labeling ; Localization ; Mass spectrometry ; Mass spectroscopy ; Medicine and Health Sciences ; Ontology ; Packaging ; Prevention ; Proteins ; Research and Analysis Methods ; Risk factors ; RNA ; RNA polymerase ; RNA polymerase II ; Sarcoma ; Scientific imaging ; siRNA ; Transcription ; Viral Genome Packaging ; Viral Proteins - genetics ; Viral Proteins - metabolism ; Virus Replication ; Viruses</subject><ispartof>PLoS pathogens, 2023-04, Vol.19 (4), p.e1011163-e1011163</ispartof><rights>Copyright: © 2023 McCollum et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.</rights><rights>COPYRIGHT 2023 Public Library of Science</rights><rights>2023 McCollum et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>2023 McCollum et al 2023 McCollum et al</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c728t-69d8c274f07a397dfc8943d24cc9d97428a4298ac3dd25287f06ed593ec13ec13</citedby><cites>FETCH-LOGICAL-c728t-69d8c274f07a397dfc8943d24cc9d97428a4298ac3dd25287f06ed593ec13ec13</cites><orcidid>0000-0001-7277-5233 ; 0000-0003-0479-9377</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC10138851/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC10138851/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,724,777,781,861,882,2096,2915,23847,27905,27906,53772,53774,79349,79350</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/37068108$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><contributor>Swaminathan, Sankar</contributor><creatorcontrib>McCollum, Chloe O</creatorcontrib><creatorcontrib>Didychuk, Allison L</creatorcontrib><creatorcontrib>Liu, Dawei</creatorcontrib><creatorcontrib>Murray-Nerger, Laura A</creatorcontrib><creatorcontrib>Cristea, Ileana M</creatorcontrib><creatorcontrib>Glaunsinger, Britt A</creatorcontrib><title>The viral packaging motor potentiates Kaposi's sarcoma-associated herpesvirus gene expression late in infection</title><title>PLoS pathogens</title><addtitle>PLoS Pathog</addtitle><description>β- and γ-herpesviruses transcribe their late genes in a manner distinct from host transcription. This process is directed by a complex of viral transcriptional activator proteins that hijack cellular RNA polymerase II and an unknown set of additional factors. We employed proximity labeling coupled with mass spectrometry, followed by CRISPR and siRNA screening to identify proteins functionally associated with the Kaposi's sarcoma-associated herpesvirus (KSHV) late gene transcriptional complex. These data revealed that the catalytic subunit of the viral DNA packaging motor, ORF29, is both dynamically associated with the viral transcriptional activator complex and potentiates gene expression late in infection. Through genetic mutation and deletion of ORF29, we establish that its catalytic activity potentiates viral transcription and is required for robust accumulation of essential late proteins during infection. Thus, we propose an expanded role for ORF29 that encompasses its established function in viral packaging and its newly discovered contributions to viral transcription and late gene expression in KSHV.</description><subject>Analysis</subject><subject>Artificial chromosomes</subject><subject>Biology and life sciences</subject><subject>Care and treatment</subject><subject>Catalytic activity</subject><subject>Complications and side effects</subject><subject>CRISPR</subject><subject>Cytomegalovirus</subject><subject>Deoxyribonucleic acid</subject><subject>DNA</subject><subject>DNA-directed RNA polymerase</subject><subject>Engineering and Technology</subject><subject>Flow cytometry</subject><subject>Gene deletion</subject><subject>Gene Expression</subject><subject>Gene Expression Regulation, Viral</subject><subject>Genes</subject><subject>Genetic aspects</subject><subject>Genetic research</subject><subject>Genetic screening</subject><subject>Genetic transcription</subject><subject>Genomes</subject><subject>Health aspects</subject><subject>Herpes</subject><subject>Herpes viruses</subject><subject>Herpesvirus 8, Human - 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genetics</topic><topic>Herpesvirus 8, Human - metabolism</topic><topic>Herpesvirus diseases</topic><topic>Infection</topic><topic>Infections</topic><topic>Kaposi's sarcoma</topic><topic>Kaposis sarcoma</topic><topic>Labeling</topic><topic>Localization</topic><topic>Mass spectrometry</topic><topic>Mass spectroscopy</topic><topic>Medicine and Health Sciences</topic><topic>Ontology</topic><topic>Packaging</topic><topic>Prevention</topic><topic>Proteins</topic><topic>Research and Analysis Methods</topic><topic>Risk factors</topic><topic>RNA</topic><topic>RNA polymerase</topic><topic>RNA polymerase II</topic><topic>Sarcoma</topic><topic>Scientific imaging</topic><topic>siRNA</topic><topic>Transcription</topic><topic>Viral Genome Packaging</topic><topic>Viral Proteins - genetics</topic><topic>Viral Proteins - metabolism</topic><topic>Virus Replication</topic><topic>Viruses</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>McCollum, Chloe O</creatorcontrib><creatorcontrib>Didychuk, Allison L</creatorcontrib><creatorcontrib>Liu, Dawei</creatorcontrib><creatorcontrib>Murray-Nerger, Laura A</creatorcontrib><creatorcontrib>Cristea, Ileana M</creatorcontrib><creatorcontrib>Glaunsinger, Britt A</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Gale In Context: Canada</collection><collection>Gale In Context: Science</collection><collection>ProQuest Central (Corporate)</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Virology and AIDS Abstracts</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Medical Database (Alumni Edition)</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest One Sustainability</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Biological Science Database</collection><collection>Publicly Available Content Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>PLoS pathogens</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>McCollum, Chloe O</au><au>Didychuk, Allison L</au><au>Liu, Dawei</au><au>Murray-Nerger, Laura A</au><au>Cristea, Ileana M</au><au>Glaunsinger, Britt A</au><au>Swaminathan, Sankar</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>The viral packaging motor potentiates Kaposi's sarcoma-associated herpesvirus gene expression late in infection</atitle><jtitle>PLoS pathogens</jtitle><addtitle>PLoS Pathog</addtitle><date>2023-04-17</date><risdate>2023</risdate><volume>19</volume><issue>4</issue><spage>e1011163</spage><epage>e1011163</epage><pages>e1011163-e1011163</pages><issn>1553-7374</issn><issn>1553-7366</issn><eissn>1553-7374</eissn><abstract>β- and γ-herpesviruses transcribe their late genes in a manner distinct from host transcription. This process is directed by a complex of viral transcriptional activator proteins that hijack cellular RNA polymerase II and an unknown set of additional factors. We employed proximity labeling coupled with mass spectrometry, followed by CRISPR and siRNA screening to identify proteins functionally associated with the Kaposi's sarcoma-associated herpesvirus (KSHV) late gene transcriptional complex. These data revealed that the catalytic subunit of the viral DNA packaging motor, ORF29, is both dynamically associated with the viral transcriptional activator complex and potentiates gene expression late in infection. Through genetic mutation and deletion of ORF29, we establish that its catalytic activity potentiates viral transcription and is required for robust accumulation of essential late proteins during infection. Thus, we propose an expanded role for ORF29 that encompasses its established function in viral packaging and its newly discovered contributions to viral transcription and late gene expression in KSHV.</abstract><cop>United States</cop><pub>Public Library of Science</pub><pmid>37068108</pmid><doi>10.1371/journal.ppat.1011163</doi><tpages>e1011163</tpages><orcidid>https://orcid.org/0000-0001-7277-5233</orcidid><orcidid>https://orcid.org/0000-0003-0479-9377</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Analysis Artificial chromosomes Biology and life sciences Care and treatment Catalytic activity Complications and side effects CRISPR Cytomegalovirus Deoxyribonucleic acid DNA DNA-directed RNA polymerase Engineering and Technology Flow cytometry Gene deletion Gene Expression Gene Expression Regulation, Viral Genes Genetic aspects Genetic research Genetic screening Genetic transcription Genomes Health aspects Herpes Herpes viruses Herpesvirus 8, Human - genetics Herpesvirus 8, Human - metabolism Herpesvirus diseases Infection Infections Kaposi's sarcoma Kaposis sarcoma Labeling Localization Mass spectrometry Mass spectroscopy Medicine and Health Sciences Ontology Packaging Prevention Proteins Research and Analysis Methods Risk factors RNA RNA polymerase RNA polymerase II Sarcoma Scientific imaging siRNA Transcription Viral Genome Packaging Viral Proteins - genetics Viral Proteins - metabolism Virus Replication Viruses |
title | The viral packaging motor potentiates Kaposi's sarcoma-associated herpesvirus gene expression late in infection |
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