Foci-forming regions of pyruvate kinase and enolase at the molecular surface incorporate proteins into yeast cytoplasmic metabolic enzymes transiently assembling (META) bodies

Spatial reorganization of metabolic enzymes to form the "metabolic enzymes transiently assembling (META) body" is increasingly recognized as a mechanism contributing to regulation of cellular metabolism in response to environmental changes. A number of META body-forming enzymes, including...

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Veröffentlicht in:PloS one 2023-04, Vol.18 (4), p.e0283002-e0283002
Hauptverfasser: Utsumi, Ryotaro, Murata, Yuki, Ito-Harashima, Sayoko, Akai, Misaki, Miura, Natsuko, Kuroda, Kouichi, Ueda, Mitsuyoshi, Kataoka, Michihiko
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container_title PloS one
container_volume 18
creator Utsumi, Ryotaro
Murata, Yuki
Ito-Harashima, Sayoko
Akai, Misaki
Miura, Natsuko
Kuroda, Kouichi
Ueda, Mitsuyoshi
Kataoka, Michihiko
description Spatial reorganization of metabolic enzymes to form the "metabolic enzymes transiently assembling (META) body" is increasingly recognized as a mechanism contributing to regulation of cellular metabolism in response to environmental changes. A number of META body-forming enzymes, including enolase (Eno2p) and phosphofructokinase, have been shown to contain condensate-forming regions. However, whether all META body-forming enzymes have condensate-forming regions or whether enzymes have multiple condensate-forming regions remains unknown. The condensate-forming regions of META body-forming enzymes have potential utility in the creation of artificial intracellular enzyme assemblies. In the present study, the whole sequence of yeast pyruvate kinase (Cdc19p) was searched for condensate-forming regions. Four peptide fragments comprising 27-42 amino acids were found to form condensates. Together with the fragment previously identified from Eno2p, these peptide regions were collectively termed "META body-forming sequences (METAfos)." METAfos-tagged yeast alcohol dehydrogenase (Adh1p) was found to co-localize with META bodies formed by endogenous Cdc19p under hypoxic conditions. The effect of Adh1p co-localization with META bodies on cell metabolism was further evaluated. Expression of Adh1p fused with a METAfos-tag increased production of ethanol compared to acetic acid, indicating that spatial reorganization of metabolic enzymes affects cell metabolism. These results contribute to understanding of the mechanisms and biological roles of META body formation.
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subjects Acetic acid
Alcohol dehydrogenase
Amino acids
Analysis
Biology and Life Sciences
Condensates
E coli
Electrolysis
Environmental changes
Enzymes
Ethanol
Evaluation
Genomes
Genomics
Glucose
Hypoxia
Kinases
Localization
Metabolism
Phosphofructokinase
Phosphopyruvate hydratase
Phosphopyruvate Hydratase - genetics
Phosphopyruvate Hydratase - metabolism
Physical Sciences
Plasmids
Properties
Proteins
Proteins - metabolism
Pyruvate kinase
Pyruvate Kinase - genetics
Pyruvate Kinase - metabolism
Pyruvic acid
Research and Analysis Methods
Saccharomyces cerevisiae - metabolism
Yeast
Yeasts
title Foci-forming regions of pyruvate kinase and enolase at the molecular surface incorporate proteins into yeast cytoplasmic metabolic enzymes transiently assembling (META) bodies
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