Early midcell localization of Escherichia coli PBP4 supports the function of peptidoglycan amidases
Insertion of new material into the Escherichia coli peptidoglycan (PG) sacculus between the cytoplasmic membrane and the outer membrane requires a well-organized balance between synthetic and hydrolytic activities to maintain cell shape and avoid lysis. Since most bacteria carry multiple enzymes car...
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creator | Verheul, Jolanda Lodge, Adam Yau, Hamish C L Liu, Xiaolong Boelter, Gabriela Liu, Xinwei Solovyova, Alexandra S Typas, Athanasios Banzhaf, Manuel Vollmer, Waldemar den Blaauwen, Tanneke |
description | Insertion of new material into the Escherichia coli peptidoglycan (PG) sacculus between the cytoplasmic membrane and the outer membrane requires a well-organized balance between synthetic and hydrolytic activities to maintain cell shape and avoid lysis. Since most bacteria carry multiple enzymes carrying the same type of PG hydrolytic activity, we know little about the specific function of given enzymes. Here we show that the DD-carboxy/endopeptidase PBP4 localizes in a PBP1A/LpoA and FtsEX dependent fashion at midcell during septal PG synthesis. Midcell localization of PBP4 requires its non-catalytic domain 3 of unknown function, but not the activity of PBP4 or FtsE. Microscale thermophoresis with isolated proteins shows that PBP4 interacts with NlpI and the FtsEX-interacting protein EnvC, an activator of amidases AmiA and AmiB, which are needed to generate denuded glycan strands to recruit the initiator of septal PG synthesis, FtsN. The domain 3 of PBP4 is needed for the interaction with NlpI and EnvC, but not PBP1A or LpoA. In vivo crosslinking experiments confirm the interaction of PBP4 with PBP1A and LpoA. We propose that the interaction of PBP4 with EnvC, whilst not absolutely necessary for mid-cell recruitment of either protein, coordinates the activities of PBP4 and the amidases, which affects the formation of denuded glycan strands that attract FtsN. Consistent with this model, we found that the divisome assembly at midcell was premature in cells lacking PBP4, illustrating how the complexity of interactions affect the timing of cell division initiation. |
doi_str_mv | 10.1371/journal.pgen.1010222 |
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Since most bacteria carry multiple enzymes carrying the same type of PG hydrolytic activity, we know little about the specific function of given enzymes. Here we show that the DD-carboxy/endopeptidase PBP4 localizes in a PBP1A/LpoA and FtsEX dependent fashion at midcell during septal PG synthesis. Midcell localization of PBP4 requires its non-catalytic domain 3 of unknown function, but not the activity of PBP4 or FtsE. Microscale thermophoresis with isolated proteins shows that PBP4 interacts with NlpI and the FtsEX-interacting protein EnvC, an activator of amidases AmiA and AmiB, which are needed to generate denuded glycan strands to recruit the initiator of septal PG synthesis, FtsN. The domain 3 of PBP4 is needed for the interaction with NlpI and EnvC, but not PBP1A or LpoA. In vivo crosslinking experiments confirm the interaction of PBP4 with PBP1A and LpoA. We propose that the interaction of PBP4 with EnvC, whilst not absolutely necessary for mid-cell recruitment of either protein, coordinates the activities of PBP4 and the amidases, which affects the formation of denuded glycan strands that attract FtsN. Consistent with this model, we found that the divisome assembly at midcell was premature in cells lacking PBP4, illustrating how the complexity of interactions affect the timing of cell division initiation.</description><identifier>ISSN: 1553-7404</identifier><identifier>ISSN: 1553-7390</identifier><identifier>EISSN: 1553-7404</identifier><identifier>DOI: 10.1371/journal.pgen.1010222</identifier><identifier>PMID: 35604931</identifier><language>eng</language><publisher>United States: Public Library of Science</publisher><subject>Age ; Antibodies ; Biology and Life Sciences ; Cell cycle ; Cell division ; Cell size ; Cytoplasmic membranes ; E coli ; Endopeptidase ; Enzymes ; Escherichia coli ; Genetic aspects ; Lipoproteins ; Localization ; Lysis ; Microbial enzymes ; Morphology ; Peptides ; Peptidoglycans ; Physical Sciences ; Physiological aspects ; Proteins ; Research and Analysis Methods ; Saccule</subject><ispartof>PLoS genetics, 2022-05, Vol.18 (5), p.e1010222-e1010222</ispartof><rights>COPYRIGHT 2022 Public Library of Science</rights><rights>2022 Verheul et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. 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Since most bacteria carry multiple enzymes carrying the same type of PG hydrolytic activity, we know little about the specific function of given enzymes. Here we show that the DD-carboxy/endopeptidase PBP4 localizes in a PBP1A/LpoA and FtsEX dependent fashion at midcell during septal PG synthesis. Midcell localization of PBP4 requires its non-catalytic domain 3 of unknown function, but not the activity of PBP4 or FtsE. Microscale thermophoresis with isolated proteins shows that PBP4 interacts with NlpI and the FtsEX-interacting protein EnvC, an activator of amidases AmiA and AmiB, which are needed to generate denuded glycan strands to recruit the initiator of septal PG synthesis, FtsN. The domain 3 of PBP4 is needed for the interaction with NlpI and EnvC, but not PBP1A or LpoA. In vivo crosslinking experiments confirm the interaction of PBP4 with PBP1A and LpoA. We propose that the interaction of PBP4 with EnvC, whilst not absolutely necessary for mid-cell recruitment of either protein, coordinates the activities of PBP4 and the amidases, which affects the formation of denuded glycan strands that attract FtsN. Consistent with this model, we found that the divisome assembly at midcell was premature in cells lacking PBP4, illustrating how the complexity of interactions affect the timing of cell division initiation.</description><subject>Age</subject><subject>Antibodies</subject><subject>Biology and Life Sciences</subject><subject>Cell cycle</subject><subject>Cell division</subject><subject>Cell size</subject><subject>Cytoplasmic membranes</subject><subject>E coli</subject><subject>Endopeptidase</subject><subject>Enzymes</subject><subject>Escherichia coli</subject><subject>Genetic aspects</subject><subject>Lipoproteins</subject><subject>Localization</subject><subject>Lysis</subject><subject>Microbial enzymes</subject><subject>Morphology</subject><subject>Peptides</subject><subject>Peptidoglycans</subject><subject>Physical Sciences</subject><subject>Physiological aspects</subject><subject>Proteins</subject><subject>Research and Analysis 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midcell localization of Escherichia coli PBP4 supports the function of peptidoglycan amidases</title><author>Verheul, Jolanda ; Lodge, Adam ; Yau, Hamish C L ; Liu, Xiaolong ; Boelter, Gabriela ; Liu, Xinwei ; Solovyova, Alexandra S ; Typas, Athanasios ; Banzhaf, Manuel ; Vollmer, Waldemar ; den Blaauwen, Tanneke</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c656t-762d50c2457aa02d772ee7b952d491cc9d3387f9d69914274139aecb0de03c7f3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2022</creationdate><topic>Age</topic><topic>Antibodies</topic><topic>Biology and Life Sciences</topic><topic>Cell cycle</topic><topic>Cell division</topic><topic>Cell size</topic><topic>Cytoplasmic membranes</topic><topic>E coli</topic><topic>Endopeptidase</topic><topic>Enzymes</topic><topic>Escherichia coli</topic><topic>Genetic aspects</topic><topic>Lipoproteins</topic><topic>Localization</topic><topic>Lysis</topic><topic>Microbial enzymes</topic><topic>Morphology</topic><topic>Peptides</topic><topic>Peptidoglycans</topic><topic>Physical Sciences</topic><topic>Physiological aspects</topic><topic>Proteins</topic><topic>Research and Analysis Methods</topic><topic>Saccule</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Verheul, Jolanda</creatorcontrib><creatorcontrib>Lodge, Adam</creatorcontrib><creatorcontrib>Yau, Hamish C L</creatorcontrib><creatorcontrib>Liu, Xiaolong</creatorcontrib><creatorcontrib>Boelter, Gabriela</creatorcontrib><creatorcontrib>Liu, Xinwei</creatorcontrib><creatorcontrib>Solovyova, Alexandra S</creatorcontrib><creatorcontrib>Typas, Athanasios</creatorcontrib><creatorcontrib>Banzhaf, Manuel</creatorcontrib><creatorcontrib>Vollmer, Waldemar</creatorcontrib><creatorcontrib>den Blaauwen, 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Adam</au><au>Yau, Hamish C L</au><au>Liu, Xiaolong</au><au>Boelter, Gabriela</au><au>Liu, Xinwei</au><au>Solovyova, Alexandra S</au><au>Typas, Athanasios</au><au>Banzhaf, Manuel</au><au>Vollmer, Waldemar</au><au>den Blaauwen, Tanneke</au><au>Levin, Petra Anne</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Early midcell localization of Escherichia coli PBP4 supports the function of peptidoglycan amidases</atitle><jtitle>PLoS genetics</jtitle><addtitle>PLoS Genet</addtitle><date>2022-05-23</date><risdate>2022</risdate><volume>18</volume><issue>5</issue><spage>e1010222</spage><epage>e1010222</epage><pages>e1010222-e1010222</pages><issn>1553-7404</issn><issn>1553-7390</issn><eissn>1553-7404</eissn><abstract>Insertion of new material into the Escherichia coli peptidoglycan (PG) sacculus between the cytoplasmic membrane and the outer membrane requires a well-organized balance between synthetic and hydrolytic activities to maintain cell shape and avoid lysis. Since most bacteria carry multiple enzymes carrying the same type of PG hydrolytic activity, we know little about the specific function of given enzymes. Here we show that the DD-carboxy/endopeptidase PBP4 localizes in a PBP1A/LpoA and FtsEX dependent fashion at midcell during septal PG synthesis. Midcell localization of PBP4 requires its non-catalytic domain 3 of unknown function, but not the activity of PBP4 or FtsE. Microscale thermophoresis with isolated proteins shows that PBP4 interacts with NlpI and the FtsEX-interacting protein EnvC, an activator of amidases AmiA and AmiB, which are needed to generate denuded glycan strands to recruit the initiator of septal PG synthesis, FtsN. The domain 3 of PBP4 is needed for the interaction with NlpI and EnvC, but not PBP1A or LpoA. In vivo crosslinking experiments confirm the interaction of PBP4 with PBP1A and LpoA. We propose that the interaction of PBP4 with EnvC, whilst not absolutely necessary for mid-cell recruitment of either protein, coordinates the activities of PBP4 and the amidases, which affects the formation of denuded glycan strands that attract FtsN. Consistent with this model, we found that the divisome assembly at midcell was premature in cells lacking PBP4, illustrating how the complexity of interactions affect the timing of cell division initiation.</abstract><cop>United States</cop><pub>Public Library of Science</pub><pmid>35604931</pmid><doi>10.1371/journal.pgen.1010222</doi><tpages>e1010222</tpages><orcidid>https://orcid.org/0000-0002-6066-4226</orcidid><orcidid>https://orcid.org/0000-0002-5403-5597</orcidid><orcidid>https://orcid.org/0000-0002-3448-7406</orcidid><orcidid>https://orcid.org/0000-0002-0797-9018</orcidid><orcidid>https://orcid.org/0000-0002-5682-7037</orcidid><orcidid>https://orcid.org/0000-0003-0408-8567</orcidid><orcidid>https://orcid.org/0000-0001-6704-580X</orcidid><orcidid>https://orcid.org/0000-0002-1812-8681</orcidid><orcidid>https://orcid.org/0000-0002-4682-1037</orcidid><orcidid>https://orcid.org/0000-0002-5576-1566</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Age Antibodies Biology and Life Sciences Cell cycle Cell division Cell size Cytoplasmic membranes E coli Endopeptidase Enzymes Escherichia coli Genetic aspects Lipoproteins Localization Lysis Microbial enzymes Morphology Peptides Peptidoglycans Physical Sciences Physiological aspects Proteins Research and Analysis Methods Saccule |
title | Early midcell localization of Escherichia coli PBP4 supports the function of peptidoglycan amidases |
url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-29T21%3A08%3A31IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-gale_plos_&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Early%20midcell%20localization%20of%20Escherichia%20coli%20PBP4%20supports%20the%20function%20of%20peptidoglycan%20amidases&rft.jtitle=PLoS%20genetics&rft.au=Verheul,%20Jolanda&rft.date=2022-05-23&rft.volume=18&rft.issue=5&rft.spage=e1010222&rft.epage=e1010222&rft.pages=e1010222-e1010222&rft.issn=1553-7404&rft.eissn=1553-7404&rft_id=info:doi/10.1371/journal.pgen.1010222&rft_dat=%3Cgale_plos_%3EA705776893%3C/gale_plos_%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=2677633046&rft_id=info:pmid/35604931&rft_galeid=A705776893&rft_doaj_id=oai_doaj_org_article_644229ffa5944acca71e1a893fb03c59&rfr_iscdi=true |