Infection, recovery and re-infection of farmed mink with SARS-CoV-2
Mink, on a farm with about 15,000 animals, became infected with SARS-CoV-2. Over 75% of tested animals were positive for SARS-CoV-2 RNA in throat swabs and 100% of tested animals were seropositive. The virus responsible had a deletion of nucleotides encoding residues H69 and V70 within the spike pro...
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creator | Rasmussen, Thomas Bruun Fonager, Jannik Jørgensen, Charlotte Sværke Lassaunière, Ria Hammer, Anne Sofie Quaade, Michelle Lauge Boklund, Anette Lohse, Louise Strandbygaard, Bertel Rasmussen, Morten Michaelsen, Thomas Yssing Mortensen, Sten Fomsgaard, Anders Belsham, Graham J Bøtner, Anette |
description | Mink, on a farm with about 15,000 animals, became infected with SARS-CoV-2. Over 75% of tested animals were positive for SARS-CoV-2 RNA in throat swabs and 100% of tested animals were seropositive. The virus responsible had a deletion of nucleotides encoding residues H69 and V70 within the spike protein gene as well as the A22920T mutation, resulting in the Y453F substitution within this protein, seen previously in mink. The infected mink recovered and after free-testing of 300 mink (a level giving 93% confidence of detecting a 1% prevalence), the animals remained seropositive. During further follow-up studies, after a period of more than 2 months without any virus detection, over 75% of tested animals again scored positive for SARS-CoV-2 RNA. Whole genome sequencing showed that the viruses circulating during this re-infection were most closely related to those identified in the first outbreak on this farm but additional sequence changes had occurred. Animals had much higher levels of anti-SARS-CoV-2 antibodies in serum samples after the second round of infection than at free-testing or during recovery from initial infection, consistent with a boosted immune response. Thus, it was concluded that following recovery from an initial infection, seropositive mink were readily re-infected by SARS-CoV-2. |
doi_str_mv | 10.1371/journal.ppat.1010068 |
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Over 75% of tested animals were positive for SARS-CoV-2 RNA in throat swabs and 100% of tested animals were seropositive. The virus responsible had a deletion of nucleotides encoding residues H69 and V70 within the spike protein gene as well as the A22920T mutation, resulting in the Y453F substitution within this protein, seen previously in mink. The infected mink recovered and after free-testing of 300 mink (a level giving 93% confidence of detecting a 1% prevalence), the animals remained seropositive. During further follow-up studies, after a period of more than 2 months without any virus detection, over 75% of tested animals again scored positive for SARS-CoV-2 RNA. Whole genome sequencing showed that the viruses circulating during this re-infection were most closely related to those identified in the first outbreak on this farm but additional sequence changes had occurred. Animals had much higher levels of anti-SARS-CoV-2 antibodies in serum samples after the second round of infection than at free-testing or during recovery from initial infection, consistent with a boosted immune response. Thus, it was concluded that following recovery from an initial infection, seropositive mink were readily re-infected by SARS-CoV-2.</description><identifier>ISSN: 1553-7374</identifier><identifier>ISSN: 1553-7366</identifier><identifier>EISSN: 1553-7374</identifier><identifier>DOI: 10.1371/journal.ppat.1010068</identifier><identifier>PMID: 34780574</identifier><language>eng</language><publisher>United States: Public Library of Science</publisher><subject>Animals ; Antibodies ; Antibodies, Neutralizing - immunology ; Antibodies, Viral - immunology ; Biology and life sciences ; COVID-19 ; COVID-19 - veterinary ; COVID-19 - virology ; COVID-19 Nucleic Acid Testing ; COVID-19 Serological Testing ; Diseases ; Farms ; Follow-Up Studies ; Gene deletion ; Gene sequencing ; Genomes ; Humans ; Immune response ; Infections ; Medicine and health sciences ; Mink - immunology ; Mink - virology ; Minks ; Mutation ; Nucleotides ; Pharynx - virology ; Phylogeny ; Proteins ; Recovery ; Reinfection - virology ; Research and Analysis Methods ; Ribonucleic acid ; RNA ; RNA, Viral ; SARS-CoV-2 - genetics ; SARS-CoV-2 - immunology ; Severe acute respiratory syndrome ; Severe acute respiratory syndrome coronavirus 2 ; Spike Glycoprotein, Coronavirus - genetics ; Spike protein ; Viral diseases ; Viruses ; Whole Genome Sequencing</subject><ispartof>PLoS pathogens, 2021-11, Vol.17 (11), p.e1010068-e1010068</ispartof><rights>COPYRIGHT 2021 Public Library of Science</rights><rights>2021 Rasmussen et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. 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Over 75% of tested animals were positive for SARS-CoV-2 RNA in throat swabs and 100% of tested animals were seropositive. The virus responsible had a deletion of nucleotides encoding residues H69 and V70 within the spike protein gene as well as the A22920T mutation, resulting in the Y453F substitution within this protein, seen previously in mink. The infected mink recovered and after free-testing of 300 mink (a level giving 93% confidence of detecting a 1% prevalence), the animals remained seropositive. During further follow-up studies, after a period of more than 2 months without any virus detection, over 75% of tested animals again scored positive for SARS-CoV-2 RNA. Whole genome sequencing showed that the viruses circulating during this re-infection were most closely related to those identified in the first outbreak on this farm but additional sequence changes had occurred. Animals had much higher levels of anti-SARS-CoV-2 antibodies in serum samples after the second round of infection than at free-testing or during recovery from initial infection, consistent with a boosted immune response. Thus, it was concluded that following recovery from an initial infection, seropositive mink were readily re-infected by SARS-CoV-2.</description><subject>Animals</subject><subject>Antibodies</subject><subject>Antibodies, Neutralizing - immunology</subject><subject>Antibodies, Viral - immunology</subject><subject>Biology and life sciences</subject><subject>COVID-19</subject><subject>COVID-19 - veterinary</subject><subject>COVID-19 - virology</subject><subject>COVID-19 Nucleic Acid Testing</subject><subject>COVID-19 Serological Testing</subject><subject>Diseases</subject><subject>Farms</subject><subject>Follow-Up Studies</subject><subject>Gene deletion</subject><subject>Gene sequencing</subject><subject>Genomes</subject><subject>Humans</subject><subject>Immune response</subject><subject>Infections</subject><subject>Medicine and health sciences</subject><subject>Mink - immunology</subject><subject>Mink - virology</subject><subject>Minks</subject><subject>Mutation</subject><subject>Nucleotides</subject><subject>Pharynx - virology</subject><subject>Phylogeny</subject><subject>Proteins</subject><subject>Recovery</subject><subject>Reinfection - virology</subject><subject>Research and Analysis Methods</subject><subject>Ribonucleic acid</subject><subject>RNA</subject><subject>RNA, Viral</subject><subject>SARS-CoV-2 - genetics</subject><subject>SARS-CoV-2 - immunology</subject><subject>Severe acute respiratory syndrome</subject><subject>Severe acute respiratory syndrome coronavirus 2</subject><subject>Spike Glycoprotein, Coronavirus - genetics</subject><subject>Spike protein</subject><subject>Viral diseases</subject><subject>Viruses</subject><subject>Whole Genome Sequencing</subject><issn>1553-7374</issn><issn>1553-7366</issn><issn>1553-7374</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2021</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>BENPR</sourceid><sourceid>DOA</sourceid><recordid>eNqVkstu1DAUhiMEoqXwBggisQGJDHZ83yCNRlxGqkDqAFvLceyphySe2kmhb4_DZKoGdYO88O07__F_fLLsOQQLiBh8t_ND6FSz2O9Vv4AAAkD5g-wUEoIKhhh-eGd9kj2JcQcAhgjSx9kJwowDwvBptlp31uje-e5tHoz21ybc5Kqr06Zwx6vc29yq0Jo6b133M__l-st8s7zYFCv_oyifZo-saqJ5Ns1n2fePH76tPhfnXz-tV8vzQlMK-wIxzllVcWYwtMZalN6iGSJIY1vWrCTQUmCghSXHGopaWKuFQiUQFaoBFegse3nQ3Tc-ysl_lCWFQCABIEnE-kDUXu3kPrhWhRvplZN_D3zYShV6pxsjsWYUUVtCAg22dSWQQtwSiipUVVbXSev9lG2oknNtuj6oZiY6v-ncpdz6a8lpKZLXJPB6Egj-ajCxl62L2jSN6owf0ruJ4IDxEo7oq3_Q-91N1FYlA-l3fMqrR1G5pBwTiks0VmlxD5VGbVqnfWesS-ezgDezgMT05ne_VUOMcr25-A_2y5zFB1YHH2Mw9rZ2EMixhY8m5djCcmrhFPbibt1vg449i_4AJqbp9g</recordid><startdate>20211101</startdate><enddate>20211101</enddate><creator>Rasmussen, Thomas Bruun</creator><creator>Fonager, Jannik</creator><creator>Jørgensen, Charlotte Sværke</creator><creator>Lassaunière, Ria</creator><creator>Hammer, Anne Sofie</creator><creator>Quaade, Michelle Lauge</creator><creator>Boklund, Anette</creator><creator>Lohse, Louise</creator><creator>Strandbygaard, Bertel</creator><creator>Rasmussen, Morten</creator><creator>Michaelsen, Thomas Yssing</creator><creator>Mortensen, Sten</creator><creator>Fomsgaard, Anders</creator><creator>Belsham, Graham J</creator><creator>Bøtner, Anette</creator><general>Public Library of Science</general><general>Public Library of Science (PLoS)</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>ISN</scope><scope>ISR</scope><scope>3V.</scope><scope>7QL</scope><scope>7U9</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M7P</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope><orcidid>https://orcid.org/0000-0003-1187-4873</orcidid><orcidid>https://orcid.org/0000-0001-7603-1004</orcidid><orcidid>https://orcid.org/0000-0002-7254-1661</orcidid><orcidid>https://orcid.org/0000-0002-4241-1559</orcidid><orcidid>https://orcid.org/0000-0002-7156-1986</orcidid><orcidid>https://orcid.org/0000-0001-7491-4137</orcidid><orcidid>https://orcid.org/0000-0001-8399-7640</orcidid><orcidid>https://orcid.org/0000-0002-3910-7185</orcidid><orcidid>https://orcid.org/0000-0003-4304-0603</orcidid><orcidid>https://orcid.org/0000-0001-6359-3403</orcidid><orcidid>https://orcid.org/0000-0002-6769-5447</orcidid></search><sort><creationdate>20211101</creationdate><title>Infection, recovery and re-infection of farmed mink with SARS-CoV-2</title><author>Rasmussen, Thomas Bruun ; Fonager, Jannik ; Jørgensen, Charlotte Sværke ; Lassaunière, Ria ; Hammer, Anne Sofie ; Quaade, Michelle Lauge ; Boklund, Anette ; Lohse, Louise ; Strandbygaard, Bertel ; Rasmussen, Morten ; Michaelsen, Thomas Yssing ; Mortensen, Sten ; Fomsgaard, Anders ; Belsham, Graham J ; Bøtner, Anette</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c661t-37887bb87e41feff3316c7353c4f2d7251f60e1f1284c19d9ffc9a3209b3d0693</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2021</creationdate><topic>Animals</topic><topic>Antibodies</topic><topic>Antibodies, Neutralizing - 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recordid | cdi_plos_journals_2610939015 |
source | MEDLINE; DOAJ Directory of Open Access Journals; Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals; PubMed Central; PubMed Central Open Access; Public Library of Science (PLoS) |
subjects | Animals Antibodies Antibodies, Neutralizing - immunology Antibodies, Viral - immunology Biology and life sciences COVID-19 COVID-19 - veterinary COVID-19 - virology COVID-19 Nucleic Acid Testing COVID-19 Serological Testing Diseases Farms Follow-Up Studies Gene deletion Gene sequencing Genomes Humans Immune response Infections Medicine and health sciences Mink - immunology Mink - virology Minks Mutation Nucleotides Pharynx - virology Phylogeny Proteins Recovery Reinfection - virology Research and Analysis Methods Ribonucleic acid RNA RNA, Viral SARS-CoV-2 - genetics SARS-CoV-2 - immunology Severe acute respiratory syndrome Severe acute respiratory syndrome coronavirus 2 Spike Glycoprotein, Coronavirus - genetics Spike protein Viral diseases Viruses Whole Genome Sequencing |
title | Infection, recovery and re-infection of farmed mink with SARS-CoV-2 |
url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-02-09T15%3A20%3A21IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-gale_plos_&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Infection,%20recovery%20and%20re-infection%20of%20farmed%20mink%20with%20SARS-CoV-2&rft.jtitle=PLoS%20pathogens&rft.au=Rasmussen,%20Thomas%20Bruun&rft.date=2021-11-01&rft.volume=17&rft.issue=11&rft.spage=e1010068&rft.epage=e1010068&rft.pages=e1010068-e1010068&rft.issn=1553-7374&rft.eissn=1553-7374&rft_id=info:doi/10.1371/journal.ppat.1010068&rft_dat=%3Cgale_plos_%3EA684564239%3C/gale_plos_%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=2610939015&rft_id=info:pmid/34780574&rft_galeid=A684564239&rft_doaj_id=oai_doaj_org_article_4c7636f2151e4fdb93a38f563b3bbfcd&rfr_iscdi=true |