The EIF4E1-4EIP cap-binding complex of Trypanosoma brucei interacts with the terminal uridylyl transferase TUT3
Most transcription in Trypanosoma brucei is constitutive and polycistronic. Consequently, the parasite relies on post-transcriptional mechanisms, especially affecting translation initiation and mRNA decay, to control gene expression both at steady-state and for adaptation to different environments....
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description | Most transcription in Trypanosoma brucei is constitutive and polycistronic. Consequently, the parasite relies on post-transcriptional mechanisms, especially affecting translation initiation and mRNA decay, to control gene expression both at steady-state and for adaptation to different environments. The parasite has six isoforms of the cap-binding protein EIF4E as well as five EIF4Gs. EIF4E1 does not bind to any EIF4G, instead being associated with a 4E-binding protein, 4EIP. 4EIP represses translation and reduces the stability of a reporter mRNA when artificially tethered to the 3'-UTR, whether or not EIF4E1 is present. 4EIP is essential during the transition from the mammalian bloodstream form to the procyclic form that lives in the Tsetse vector. In contrast, EIF4E1 is dispensable during differentiation, but is required for establishment of growing procyclic forms. In Leishmania, there is some evidence that EIF4E1 might be active in translation initiation, via direct recruitment of EIF3. However in T. brucei, EIF4E1 showed no detectable association with other translation initiation factors, even in the complete absence of 4EIP. There was some evidence for interactions with NOT complex components, but if these occur they must be weak and transient. We found that EIF4E1is less abundant in the absence of 4EIP, and RNA pull-down results suggested this might occur through co-translational complex assembly. We also report that 4EIP directly recruits the cytosolic terminal uridylyl transferase TUT3 to EIF4E1/4EIP complexes. There was, however, no evidence that TUT3 is essential for 4EIP function. |
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Consequently, the parasite relies on post-transcriptional mechanisms, especially affecting translation initiation and mRNA decay, to control gene expression both at steady-state and for adaptation to different environments. The parasite has six isoforms of the cap-binding protein EIF4E as well as five EIF4Gs. EIF4E1 does not bind to any EIF4G, instead being associated with a 4E-binding protein, 4EIP. 4EIP represses translation and reduces the stability of a reporter mRNA when artificially tethered to the 3'-UTR, whether or not EIF4E1 is present. 4EIP is essential during the transition from the mammalian bloodstream form to the procyclic form that lives in the Tsetse vector. In contrast, EIF4E1 is dispensable during differentiation, but is required for establishment of growing procyclic forms. In Leishmania, there is some evidence that EIF4E1 might be active in translation initiation, via direct recruitment of EIF3. However in T. brucei, EIF4E1 showed no detectable association with other translation initiation factors, even in the complete absence of 4EIP. There was some evidence for interactions with NOT complex components, but if these occur they must be weak and transient. We found that EIF4E1is less abundant in the absence of 4EIP, and RNA pull-down results suggested this might occur through co-translational complex assembly. We also report that 4EIP directly recruits the cytosolic terminal uridylyl transferase TUT3 to EIF4E1/4EIP complexes. There was, however, no evidence that TUT3 is essential for 4EIP function.</description><identifier>ISSN: 1932-6203</identifier><identifier>EISSN: 1932-6203</identifier><identifier>DOI: 10.1371/journal.pone.0258903</identifier><identifier>PMID: 34807934</identifier><language>eng</language><publisher>United States: Public Library of Science</publisher><subject>3' Untranslated regions ; Binding proteins ; Biology and Life Sciences ; Cap-binding protein ; Cell Differentiation ; Eukaryotic Initiation Factor-4E - metabolism ; Gene expression ; Genes, Reporter ; Genetic aspects ; Genetic transcription ; Genetic translation ; Initiation factor eIF-4E ; Initiation factor eIF-4G ; Initiation factors ; Isoforms ; Life Cycle Stages ; Mammals ; Metabolism ; Mitochondria - metabolism ; Molecular biology ; mRNA stability ; mRNA turnover ; Multiprotein Complexes - metabolism ; Parasites ; Parasitological research ; Post-transcription ; Protein Binding ; Proteins ; Protozoan Proteins - metabolism ; RNA Cap-Binding Proteins - metabolism ; RNA Caps - metabolism ; RNA Nucleotidyltransferases - metabolism ; RNA polymerase ; RNA, Messenger - genetics ; RNA, Messenger - metabolism ; Transferases ; Trypanosoma brucei ; Trypanosoma brucei brucei - growth & development ; Trypanosoma brucei brucei - metabolism ; Uridylyl transferase</subject><ispartof>PloS one, 2021-11, Vol.16 (11), p.e0258903-e0258903</ispartof><rights>COPYRIGHT 2021 Public Library of Science</rights><rights>2021 Falk et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. 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There was, however, no evidence that TUT3 is essential for 4EIP function.</description><subject>3' Untranslated regions</subject><subject>Binding proteins</subject><subject>Biology and Life Sciences</subject><subject>Cap-binding protein</subject><subject>Cell Differentiation</subject><subject>Eukaryotic Initiation Factor-4E - metabolism</subject><subject>Gene expression</subject><subject>Genes, Reporter</subject><subject>Genetic aspects</subject><subject>Genetic transcription</subject><subject>Genetic translation</subject><subject>Initiation factor eIF-4E</subject><subject>Initiation factor eIF-4G</subject><subject>Initiation factors</subject><subject>Isoforms</subject><subject>Life Cycle Stages</subject><subject>Mammals</subject><subject>Metabolism</subject><subject>Mitochondria - metabolism</subject><subject>Molecular biology</subject><subject>mRNA stability</subject><subject>mRNA turnover</subject><subject>Multiprotein Complexes - metabolism</subject><subject>Parasites</subject><subject>Parasitological research</subject><subject>Post-transcription</subject><subject>Protein Binding</subject><subject>Proteins</subject><subject>Protozoan Proteins - 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Consequently, the parasite relies on post-transcriptional mechanisms, especially affecting translation initiation and mRNA decay, to control gene expression both at steady-state and for adaptation to different environments. The parasite has six isoforms of the cap-binding protein EIF4E as well as five EIF4Gs. EIF4E1 does not bind to any EIF4G, instead being associated with a 4E-binding protein, 4EIP. 4EIP represses translation and reduces the stability of a reporter mRNA when artificially tethered to the 3'-UTR, whether or not EIF4E1 is present. 4EIP is essential during the transition from the mammalian bloodstream form to the procyclic form that lives in the Tsetse vector. In contrast, EIF4E1 is dispensable during differentiation, but is required for establishment of growing procyclic forms. In Leishmania, there is some evidence that EIF4E1 might be active in translation initiation, via direct recruitment of EIF3. However in T. brucei, EIF4E1 showed no detectable association with other translation initiation factors, even in the complete absence of 4EIP. There was some evidence for interactions with NOT complex components, but if these occur they must be weak and transient. We found that EIF4E1is less abundant in the absence of 4EIP, and RNA pull-down results suggested this might occur through co-translational complex assembly. We also report that 4EIP directly recruits the cytosolic terminal uridylyl transferase TUT3 to EIF4E1/4EIP complexes. There was, however, no evidence that TUT3 is essential for 4EIP function.</abstract><cop>United States</cop><pub>Public Library of Science</pub><pmid>34807934</pmid><doi>10.1371/journal.pone.0258903</doi><tpages>e0258903</tpages><orcidid>https://orcid.org/0000-0002-6384-0731</orcidid><orcidid>https://orcid.org/0000-0003-1438-2735</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | 3' Untranslated regions Binding proteins Biology and Life Sciences Cap-binding protein Cell Differentiation Eukaryotic Initiation Factor-4E - metabolism Gene expression Genes, Reporter Genetic aspects Genetic transcription Genetic translation Initiation factor eIF-4E Initiation factor eIF-4G Initiation factors Isoforms Life Cycle Stages Mammals Metabolism Mitochondria - metabolism Molecular biology mRNA stability mRNA turnover Multiprotein Complexes - metabolism Parasites Parasitological research Post-transcription Protein Binding Proteins Protozoan Proteins - metabolism RNA Cap-Binding Proteins - metabolism RNA Caps - metabolism RNA Nucleotidyltransferases - metabolism RNA polymerase RNA, Messenger - genetics RNA, Messenger - metabolism Transferases Trypanosoma brucei Trypanosoma brucei brucei - growth & development Trypanosoma brucei brucei - metabolism Uridylyl transferase |
title | The EIF4E1-4EIP cap-binding complex of Trypanosoma brucei interacts with the terminal uridylyl transferase TUT3 |
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