Community development, implementation, and assessment of a NIBLSE bioinformatics sequence similarity learning resource

As powerful computational tools and 'big data' transform the biological sciences, bioinformatics training is becoming necessary to prepare the next generation of life scientists. Furthermore, because the tools and resources employed in bioinformatics are constantly evolving, bioinformatics...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:PloS one 2021-09, Vol.16 (9), p.e0257404-e0257404
Hauptverfasser: Kleinschmit, Adam J, Ryder, Elizabeth F, Kerby, Jacob L, Murdoch, Barbara, Donovan, Sam, Grandgenett, Nealy F, Cook, Rachel E, Siriwardana, Chamindika, Morgan, William, Pauley, Mark, Rosenwald, Anne, Triplett, Eric, Tapprich, William
Format: Artikel
Sprache:eng
Schlagworte:
Online-Zugang:Volltext
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
container_end_page e0257404
container_issue 9
container_start_page e0257404
container_title PloS one
container_volume 16
creator Kleinschmit, Adam J
Ryder, Elizabeth F
Kerby, Jacob L
Murdoch, Barbara
Donovan, Sam
Grandgenett, Nealy F
Cook, Rachel E
Siriwardana, Chamindika
Morgan, William
Pauley, Mark
Rosenwald, Anne
Triplett, Eric
Tapprich, William
description As powerful computational tools and 'big data' transform the biological sciences, bioinformatics training is becoming necessary to prepare the next generation of life scientists. Furthermore, because the tools and resources employed in bioinformatics are constantly evolving, bioinformatics learning materials must be continuously improved. In addition, these learning materials need to move beyond today's typical step-by-step guides to promote deeper conceptual understanding by students. One of the goals of the Network for Integrating Bioinformatics into Life Sciences Education (NIBSLE) is to create, curate, disseminate, and assess appropriate open-access bioinformatics learning resources. Here we describe the evolution, integration, and assessment of a learning resource that explores essential concepts of biological sequence similarity. Pre/post student assessment data from diverse life science courses show significant learning gains. These results indicate that the learning resource is a beneficial educational product for the integration of bioinformatics across curricula.
doi_str_mv 10.1371/journal.pone.0257404
format Article
fullrecord <record><control><sourceid>gale_plos_</sourceid><recordid>TN_cdi_plos_journals_2571447397</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><galeid>A674968907</galeid><doaj_id>oai_doaj_org_article_ef064b324b7b44e99619b0611396ca37</doaj_id><sourcerecordid>A674968907</sourcerecordid><originalsourceid>FETCH-LOGICAL-c692t-a185179005796533987982e3cf7ae1e3f16300002c26a1b9248cc8ca179898083</originalsourceid><addsrcrecordid>eNqNk1Fv0zAQxyMEYmPwDRBEQkIgrcWOXcd-QRrVgEoVkxjwajnupXXl2J2dVOzb49BsatAeSB5iXX73993fvix7idEUkxJ_2PouOGWnO-9giopZSRF9lJ1iQYoJKxB5fLQ-yZ7FuEVoRjhjT7MTQmeIMVyeZvu5b5rOmfY2X8EerN814Nrz3DQ7C_1Stca781y5Va5ihBj7YO7rXOXfFp-W15d5ZbxxtQ9NQnXMI9x04DTk0TTGqtBLW1DBGbfOA8RUtobn2ZNa2Qgvhu9Z9vPz5Y_518ny6stifrGcaCaKdqIwn-FSpMJLwWaECF4KXgDRdakAA6kxIyg9hS6YwpUoKNeaa5VyuOCIk7Ps9UF3Z32Ug2VRJrcwpSURZSIWB2Ll1VbugmlUuJVeGfk34MNaqpAasyChRoxWpKBVWVEKQjAsKsQwJoJpRXqtj8NuXdXASiengrIj0fEfZzZy7feSU1LwWZEE3g0CwScXYysbEzVYqxz47lC3wJwjlNA3_6APdzdQa5Ua6I8p7at7UXnBSioYF6inpg9Q6V1BY3S6X7VJ8VHC-1FCYlr43a5VF6NcXH__f_bq15h9e8RuQNl2E73t-jsYxyA9gDr4GAPU9yZjJPvxuHND9uMhh_FIaa-OD-g-6W4eyB-1LQoT</addsrcrecordid><sourcetype>Open Website</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>2571447397</pqid></control><display><type>article</type><title>Community development, implementation, and assessment of a NIBLSE bioinformatics sequence similarity learning resource</title><source>MEDLINE</source><source>DOAJ Directory of Open Access Journals</source><source>Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals</source><source>Public Library of Science (PLoS)</source><source>PubMed Central</source><source>Free Full-Text Journals in Chemistry</source><creator>Kleinschmit, Adam J ; Ryder, Elizabeth F ; Kerby, Jacob L ; Murdoch, Barbara ; Donovan, Sam ; Grandgenett, Nealy F ; Cook, Rachel E ; Siriwardana, Chamindika ; Morgan, William ; Pauley, Mark ; Rosenwald, Anne ; Triplett, Eric ; Tapprich, William</creator><contributor>Bianchi, Cesario</contributor><creatorcontrib>Kleinschmit, Adam J ; Ryder, Elizabeth F ; Kerby, Jacob L ; Murdoch, Barbara ; Donovan, Sam ; Grandgenett, Nealy F ; Cook, Rachel E ; Siriwardana, Chamindika ; Morgan, William ; Pauley, Mark ; Rosenwald, Anne ; Triplett, Eric ; Tapprich, William ; Bianchi, Cesario</creatorcontrib><description>As powerful computational tools and 'big data' transform the biological sciences, bioinformatics training is becoming necessary to prepare the next generation of life scientists. Furthermore, because the tools and resources employed in bioinformatics are constantly evolving, bioinformatics learning materials must be continuously improved. In addition, these learning materials need to move beyond today's typical step-by-step guides to promote deeper conceptual understanding by students. One of the goals of the Network for Integrating Bioinformatics into Life Sciences Education (NIBSLE) is to create, curate, disseminate, and assess appropriate open-access bioinformatics learning resources. Here we describe the evolution, integration, and assessment of a learning resource that explores essential concepts of biological sequence similarity. Pre/post student assessment data from diverse life science courses show significant learning gains. These results indicate that the learning resource is a beneficial educational product for the integration of bioinformatics across curricula.</description><identifier>ISSN: 1932-6203</identifier><identifier>EISSN: 1932-6203</identifier><identifier>DOI: 10.1371/journal.pone.0257404</identifier><identifier>PMID: 34506617</identifier><language>eng</language><publisher>United States: Public Library of Science</publisher><subject>Algorithms ; Big Data ; Bioinformatics ; Biological Science Disciplines - education ; Biology ; Biology and Life Sciences ; Classrooms ; Community development ; Computational biology ; Computational Biology - methods ; Computer applications ; Computer programs ; Computer Simulation ; Core competencies ; Curricula ; Curriculum ; Education, Distance ; Educational objectives ; Educational Status ; Equipment and supplies ; Humans ; Integration ; Interdisciplinary aspects ; Learning ; Life sciences ; Linear Models ; Methods ; People and Places ; Research and Analysis Methods ; Science education ; Sciences education ; Similarity ; Social Planning ; Social Sciences ; Software ; Student attitudes ; Students ; Teaching ; Training</subject><ispartof>PloS one, 2021-09, Vol.16 (9), p.e0257404-e0257404</ispartof><rights>COPYRIGHT 2021 Public Library of Science</rights><rights>This is an open access article, free of all copyright, and may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. The work is made available under the Creative Commons CC0 public domain dedication: https://creativecommons.org/publicdomain/zero/1.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c692t-a185179005796533987982e3cf7ae1e3f16300002c26a1b9248cc8ca179898083</citedby><cites>FETCH-LOGICAL-c692t-a185179005796533987982e3cf7ae1e3f16300002c26a1b9248cc8ca179898083</cites><orcidid>0000-0003-3820-524X</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC8432852/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC8432852/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,864,885,2102,2928,23866,27924,27925,53791,53793,79600,79601</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/34506617$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><contributor>Bianchi, Cesario</contributor><creatorcontrib>Kleinschmit, Adam J</creatorcontrib><creatorcontrib>Ryder, Elizabeth F</creatorcontrib><creatorcontrib>Kerby, Jacob L</creatorcontrib><creatorcontrib>Murdoch, Barbara</creatorcontrib><creatorcontrib>Donovan, Sam</creatorcontrib><creatorcontrib>Grandgenett, Nealy F</creatorcontrib><creatorcontrib>Cook, Rachel E</creatorcontrib><creatorcontrib>Siriwardana, Chamindika</creatorcontrib><creatorcontrib>Morgan, William</creatorcontrib><creatorcontrib>Pauley, Mark</creatorcontrib><creatorcontrib>Rosenwald, Anne</creatorcontrib><creatorcontrib>Triplett, Eric</creatorcontrib><creatorcontrib>Tapprich, William</creatorcontrib><title>Community development, implementation, and assessment of a NIBLSE bioinformatics sequence similarity learning resource</title><title>PloS one</title><addtitle>PLoS One</addtitle><description>As powerful computational tools and 'big data' transform the biological sciences, bioinformatics training is becoming necessary to prepare the next generation of life scientists. Furthermore, because the tools and resources employed in bioinformatics are constantly evolving, bioinformatics learning materials must be continuously improved. In addition, these learning materials need to move beyond today's typical step-by-step guides to promote deeper conceptual understanding by students. One of the goals of the Network for Integrating Bioinformatics into Life Sciences Education (NIBSLE) is to create, curate, disseminate, and assess appropriate open-access bioinformatics learning resources. Here we describe the evolution, integration, and assessment of a learning resource that explores essential concepts of biological sequence similarity. Pre/post student assessment data from diverse life science courses show significant learning gains. These results indicate that the learning resource is a beneficial educational product for the integration of bioinformatics across curricula.</description><subject>Algorithms</subject><subject>Big Data</subject><subject>Bioinformatics</subject><subject>Biological Science Disciplines - education</subject><subject>Biology</subject><subject>Biology and Life Sciences</subject><subject>Classrooms</subject><subject>Community development</subject><subject>Computational biology</subject><subject>Computational Biology - methods</subject><subject>Computer applications</subject><subject>Computer programs</subject><subject>Computer Simulation</subject><subject>Core competencies</subject><subject>Curricula</subject><subject>Curriculum</subject><subject>Education, Distance</subject><subject>Educational objectives</subject><subject>Educational Status</subject><subject>Equipment and supplies</subject><subject>Humans</subject><subject>Integration</subject><subject>Interdisciplinary aspects</subject><subject>Learning</subject><subject>Life sciences</subject><subject>Linear Models</subject><subject>Methods</subject><subject>People and Places</subject><subject>Research and Analysis Methods</subject><subject>Science education</subject><subject>Sciences education</subject><subject>Similarity</subject><subject>Social Planning</subject><subject>Social Sciences</subject><subject>Software</subject><subject>Student attitudes</subject><subject>Students</subject><subject>Teaching</subject><subject>Training</subject><issn>1932-6203</issn><issn>1932-6203</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2021</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><sourceid>DOA</sourceid><recordid>eNqNk1Fv0zAQxyMEYmPwDRBEQkIgrcWOXcd-QRrVgEoVkxjwajnupXXl2J2dVOzb49BsatAeSB5iXX73993fvix7idEUkxJ_2PouOGWnO-9giopZSRF9lJ1iQYoJKxB5fLQ-yZ7FuEVoRjhjT7MTQmeIMVyeZvu5b5rOmfY2X8EerN814Nrz3DQ7C_1Stca781y5Va5ihBj7YO7rXOXfFp-W15d5ZbxxtQ9NQnXMI9x04DTk0TTGqtBLW1DBGbfOA8RUtobn2ZNa2Qgvhu9Z9vPz5Y_518ny6stifrGcaCaKdqIwn-FSpMJLwWaECF4KXgDRdakAA6kxIyg9hS6YwpUoKNeaa5VyuOCIk7Ps9UF3Z32Ug2VRJrcwpSURZSIWB2Ll1VbugmlUuJVeGfk34MNaqpAasyChRoxWpKBVWVEKQjAsKsQwJoJpRXqtj8NuXdXASiengrIj0fEfZzZy7feSU1LwWZEE3g0CwScXYysbEzVYqxz47lC3wJwjlNA3_6APdzdQa5Ua6I8p7at7UXnBSioYF6inpg9Q6V1BY3S6X7VJ8VHC-1FCYlr43a5VF6NcXH__f_bq15h9e8RuQNl2E73t-jsYxyA9gDr4GAPU9yZjJPvxuHND9uMhh_FIaa-OD-g-6W4eyB-1LQoT</recordid><startdate>20210910</startdate><enddate>20210910</enddate><creator>Kleinschmit, Adam J</creator><creator>Ryder, Elizabeth F</creator><creator>Kerby, Jacob L</creator><creator>Murdoch, Barbara</creator><creator>Donovan, Sam</creator><creator>Grandgenett, Nealy F</creator><creator>Cook, Rachel E</creator><creator>Siriwardana, Chamindika</creator><creator>Morgan, William</creator><creator>Pauley, Mark</creator><creator>Rosenwald, Anne</creator><creator>Triplett, Eric</creator><creator>Tapprich, William</creator><general>Public Library of Science</general><general>Public Library of Science (PLoS)</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>IOV</scope><scope>ISR</scope><scope>3V.</scope><scope>7QG</scope><scope>7QL</scope><scope>7QO</scope><scope>7RV</scope><scope>7SN</scope><scope>7SS</scope><scope>7T5</scope><scope>7TG</scope><scope>7TM</scope><scope>7U9</scope><scope>7X2</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8AO</scope><scope>8C1</scope><scope>8FD</scope><scope>8FE</scope><scope>8FG</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABJCF</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>ARAPS</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BGLVJ</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>D1I</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>KB.</scope><scope>KB0</scope><scope>KL.</scope><scope>L6V</scope><scope>LK8</scope><scope>M0K</scope><scope>M0S</scope><scope>M1P</scope><scope>M7N</scope><scope>M7P</scope><scope>M7S</scope><scope>NAPCQ</scope><scope>P5Z</scope><scope>P62</scope><scope>P64</scope><scope>PATMY</scope><scope>PDBOC</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>PTHSS</scope><scope>PYCSY</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope><orcidid>https://orcid.org/0000-0003-3820-524X</orcidid></search><sort><creationdate>20210910</creationdate><title>Community development, implementation, and assessment of a NIBLSE bioinformatics sequence similarity learning resource</title><author>Kleinschmit, Adam J ; Ryder, Elizabeth F ; Kerby, Jacob L ; Murdoch, Barbara ; Donovan, Sam ; Grandgenett, Nealy F ; Cook, Rachel E ; Siriwardana, Chamindika ; Morgan, William ; Pauley, Mark ; Rosenwald, Anne ; Triplett, Eric ; Tapprich, William</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c692t-a185179005796533987982e3cf7ae1e3f16300002c26a1b9248cc8ca179898083</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2021</creationdate><topic>Algorithms</topic><topic>Big Data</topic><topic>Bioinformatics</topic><topic>Biological Science Disciplines - education</topic><topic>Biology</topic><topic>Biology and Life Sciences</topic><topic>Classrooms</topic><topic>Community development</topic><topic>Computational biology</topic><topic>Computational Biology - methods</topic><topic>Computer applications</topic><topic>Computer programs</topic><topic>Computer Simulation</topic><topic>Core competencies</topic><topic>Curricula</topic><topic>Curriculum</topic><topic>Education, Distance</topic><topic>Educational objectives</topic><topic>Educational Status</topic><topic>Equipment and supplies</topic><topic>Humans</topic><topic>Integration</topic><topic>Interdisciplinary aspects</topic><topic>Learning</topic><topic>Life sciences</topic><topic>Linear Models</topic><topic>Methods</topic><topic>People and Places</topic><topic>Research and Analysis Methods</topic><topic>Science education</topic><topic>Sciences education</topic><topic>Similarity</topic><topic>Social Planning</topic><topic>Social Sciences</topic><topic>Software</topic><topic>Student attitudes</topic><topic>Students</topic><topic>Teaching</topic><topic>Training</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Kleinschmit, Adam J</creatorcontrib><creatorcontrib>Ryder, Elizabeth F</creatorcontrib><creatorcontrib>Kerby, Jacob L</creatorcontrib><creatorcontrib>Murdoch, Barbara</creatorcontrib><creatorcontrib>Donovan, Sam</creatorcontrib><creatorcontrib>Grandgenett, Nealy F</creatorcontrib><creatorcontrib>Cook, Rachel E</creatorcontrib><creatorcontrib>Siriwardana, Chamindika</creatorcontrib><creatorcontrib>Morgan, William</creatorcontrib><creatorcontrib>Pauley, Mark</creatorcontrib><creatorcontrib>Rosenwald, Anne</creatorcontrib><creatorcontrib>Triplett, Eric</creatorcontrib><creatorcontrib>Tapprich, William</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Gale In Context: Opposing Viewpoints</collection><collection>Gale In Context: Science</collection><collection>ProQuest Central (Corporate)</collection><collection>Animal Behavior Abstracts</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Biotechnology Research Abstracts</collection><collection>Proquest Nursing &amp; Allied Health Source</collection><collection>Ecology Abstracts</collection><collection>Entomology Abstracts (Full archive)</collection><collection>Immunology Abstracts</collection><collection>Meteorological &amp; Geoastrophysical Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Agricultural Science Collection</collection><collection>Health &amp; Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Medical Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Public Health Database</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Technology Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>Materials Science &amp; Engineering Collection</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>Advanced Technologies &amp; Aerospace Collection</collection><collection>Agricultural &amp; Environmental Science Collection</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Technology Collection</collection><collection>Natural Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Materials Science Collection</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health &amp; Medical Complete (Alumni)</collection><collection>Materials Science Database</collection><collection>Nursing &amp; Allied Health Database (Alumni Edition)</collection><collection>Meteorological &amp; Geoastrophysical Abstracts - Academic</collection><collection>ProQuest Engineering Collection</collection><collection>ProQuest Biological Science Collection</collection><collection>Agricultural Science Database</collection><collection>Health &amp; Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biological Science Database</collection><collection>Engineering Database</collection><collection>Nursing &amp; Allied Health Premium</collection><collection>Advanced Technologies &amp; Aerospace Database</collection><collection>ProQuest Advanced Technologies &amp; Aerospace Collection</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Environmental Science Database</collection><collection>Materials Science Collection</collection><collection>Publicly Available Content Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>Engineering Collection</collection><collection>Environmental Science Collection</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>PloS one</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Kleinschmit, Adam J</au><au>Ryder, Elizabeth F</au><au>Kerby, Jacob L</au><au>Murdoch, Barbara</au><au>Donovan, Sam</au><au>Grandgenett, Nealy F</au><au>Cook, Rachel E</au><au>Siriwardana, Chamindika</au><au>Morgan, William</au><au>Pauley, Mark</au><au>Rosenwald, Anne</au><au>Triplett, Eric</au><au>Tapprich, William</au><au>Bianchi, Cesario</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Community development, implementation, and assessment of a NIBLSE bioinformatics sequence similarity learning resource</atitle><jtitle>PloS one</jtitle><addtitle>PLoS One</addtitle><date>2021-09-10</date><risdate>2021</risdate><volume>16</volume><issue>9</issue><spage>e0257404</spage><epage>e0257404</epage><pages>e0257404-e0257404</pages><issn>1932-6203</issn><eissn>1932-6203</eissn><abstract>As powerful computational tools and 'big data' transform the biological sciences, bioinformatics training is becoming necessary to prepare the next generation of life scientists. Furthermore, because the tools and resources employed in bioinformatics are constantly evolving, bioinformatics learning materials must be continuously improved. In addition, these learning materials need to move beyond today's typical step-by-step guides to promote deeper conceptual understanding by students. One of the goals of the Network for Integrating Bioinformatics into Life Sciences Education (NIBSLE) is to create, curate, disseminate, and assess appropriate open-access bioinformatics learning resources. Here we describe the evolution, integration, and assessment of a learning resource that explores essential concepts of biological sequence similarity. Pre/post student assessment data from diverse life science courses show significant learning gains. These results indicate that the learning resource is a beneficial educational product for the integration of bioinformatics across curricula.</abstract><cop>United States</cop><pub>Public Library of Science</pub><pmid>34506617</pmid><doi>10.1371/journal.pone.0257404</doi><tpages>e0257404</tpages><orcidid>https://orcid.org/0000-0003-3820-524X</orcidid><oa>free_for_read</oa></addata></record>
fulltext fulltext
identifier ISSN: 1932-6203
ispartof PloS one, 2021-09, Vol.16 (9), p.e0257404-e0257404
issn 1932-6203
1932-6203
language eng
recordid cdi_plos_journals_2571447397
source MEDLINE; DOAJ Directory of Open Access Journals; Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals; Public Library of Science (PLoS); PubMed Central; Free Full-Text Journals in Chemistry
subjects Algorithms
Big Data
Bioinformatics
Biological Science Disciplines - education
Biology
Biology and Life Sciences
Classrooms
Community development
Computational biology
Computational Biology - methods
Computer applications
Computer programs
Computer Simulation
Core competencies
Curricula
Curriculum
Education, Distance
Educational objectives
Educational Status
Equipment and supplies
Humans
Integration
Interdisciplinary aspects
Learning
Life sciences
Linear Models
Methods
People and Places
Research and Analysis Methods
Science education
Sciences education
Similarity
Social Planning
Social Sciences
Software
Student attitudes
Students
Teaching
Training
title Community development, implementation, and assessment of a NIBLSE bioinformatics sequence similarity learning resource
url https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-06T20%3A20%3A10IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-gale_plos_&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Community%20development,%20implementation,%20and%20assessment%20of%20a%20NIBLSE%20bioinformatics%20sequence%20similarity%20learning%20resource&rft.jtitle=PloS%20one&rft.au=Kleinschmit,%20Adam%20J&rft.date=2021-09-10&rft.volume=16&rft.issue=9&rft.spage=e0257404&rft.epage=e0257404&rft.pages=e0257404-e0257404&rft.issn=1932-6203&rft.eissn=1932-6203&rft_id=info:doi/10.1371/journal.pone.0257404&rft_dat=%3Cgale_plos_%3EA674968907%3C/gale_plos_%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=2571447397&rft_id=info:pmid/34506617&rft_galeid=A674968907&rft_doaj_id=oai_doaj_org_article_ef064b324b7b44e99619b0611396ca37&rfr_iscdi=true