Estimating the cumulative incidence of COVID-19 in the United States using influenza surveillance, virologic testing, and mortality data: Four complementary approaches

Effectively designing and evaluating public health responses to the ongoing COVID-19 pandemic requires accurate estimation of the prevalence of COVID-19 across the United States (US). Equipment shortages and varying testing capabilities have however hindered the usefulness of the official reported p...

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Veröffentlicht in:PLoS computational biology 2021-06, Vol.17 (6), p.e1008994-e1008994
Hauptverfasser: Lu, Fred S, Nguyen, Andre T, Link, Nicholas B, Molina, Mathieu, Davis, Jessica T, Chinazzi, Matteo, Xiong, Xinyue, Vespignani, Alessandro, Lipsitch, Marc, Santillana, Mauricio
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container_issue 6
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container_title PLoS computational biology
container_volume 17
creator Lu, Fred S
Nguyen, Andre T
Link, Nicholas B
Molina, Mathieu
Davis, Jessica T
Chinazzi, Matteo
Xiong, Xinyue
Vespignani, Alessandro
Lipsitch, Marc
Santillana, Mauricio
description Effectively designing and evaluating public health responses to the ongoing COVID-19 pandemic requires accurate estimation of the prevalence of COVID-19 across the United States (US). Equipment shortages and varying testing capabilities have however hindered the usefulness of the official reported positive COVID-19 case counts. We introduce four complementary approaches to estimate the cumulative incidence of symptomatic COVID-19 in each state in the US as well as Puerto Rico and the District of Columbia, using a combination of excess influenza-like illness reports, COVID-19 test statistics, COVID-19 mortality reports, and a spatially structured epidemic model. Instead of relying on the estimate from a single data source or method that may be biased, we provide multiple estimates, each relying on different assumptions and data sources. Across our four approaches emerges the consistent conclusion that on April 4, 2020, the estimated case count was 5 to 50 times higher than the official positive test counts across the different states. Nationally, our estimates of COVID-19 symptomatic cases as of April 4 have a likely range of 2.3 to 4.8 million, with possibly as many as 7.6 million cases, up to 25 times greater than the cumulative confirmed cases of about 311,000. Extending our methods to May 16, 2020, we estimate that cumulative symptomatic incidence ranges from 4.9 to 10.1 million, as opposed to 1.5 million positive test counts. The proposed combination of approaches may prove useful in assessing the burden of COVID-19 during resurgences in the US and other countries with comparable surveillance systems.
doi_str_mv 10.1371/journal.pcbi.1008994
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subjects Biology and Life Sciences
Coronaviruses
COVID-19
Distribution
Epidemic models
Epidemics
Estimates
Fatalities
Influenza
Medicine and Health Sciences
Methods
Mortality
Pandemics
People and places
Public health
Sentinel health events
Statistical tests
Surveillance
Surveillance systems
United States
Viral diseases
title Estimating the cumulative incidence of COVID-19 in the United States using influenza surveillance, virologic testing, and mortality data: Four complementary approaches
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