Twelve quick steps for genome assembly and annotation in the classroom

Eukaryotic genome sequencing and de novo assembly, once the exclusive domain of well-funded international consortia, have become increasingly affordable, thus fitting the budgets of individual research groups. Third-generation long-read DNA sequencing technologies are increasingly used, providing ex...

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Veröffentlicht in:	PLoS computational biology 2020-11, Vol.16 (11), p.e1008325-e1008325
Hauptverfasser:	Jung, Hyungtaek, Ventura, Tomer, Chung, J Sook, Kim, Woo-Jin, Nam, Bo-Hye, Kong, Hee Jeong, Kim, Young-Ok, Jeon, Min-Seung, Eyun, Seong-Il
Format:	Artikel
Sprache:	eng
Schlagworte:	Agricultural economics Animals Annotations Aquaculture Assembly Biology and Life Sciences Cereal crops Chromosomes Classroom techniques Computational Biology Consortia Corporate sponsorship Cost analysis Costs Data storage Deoxyribonucleic acid DNA DNA methylation DNA sequencing Education Educational aspects Educational technology Engineering and Technology Eukaryotes Gene Library Genetic aspects Genome Genome-wide association studies Genomes Genomics Genomics - education Genomics - methods Genomics - statistics & numerical data High-Throughput Nucleotide Sequencing - methods High-Throughput Nucleotide Sequencing - statistics & numerical data Histones Humans Identification and classification Literacy Livestock Maintenance Molecular Sequence Annotation - methods Molecular Sequence Annotation - statistics & numerical data Organisms Research and Analysis Methods RNA-Seq - methods RNA-Seq - statistics & numerical data Salmon Sequence Analysis, DNA - methods Sequence Analysis, DNA - statistics & numerical data Sheep Skills Software Study and teaching Tilapia Tomatoes
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