Survey of metaproteomics software tools for functional microbiome analysis

To gain a thorough appreciation of microbiome dynamics, researchers characterize the functional relevance of expressed microbial genes or proteins. This can be accomplished through metaproteomics, which characterizes the protein expression of microbiomes. Several software tools exist for analyzing m...

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Veröffentlicht in:	PloS one 2020-11, Vol.15 (11), p.e0241503-e0241503
Hauptverfasser:	Sajulga, Ray, Easterly, Caleb, Riffle, Michael, Mesuere, Bart, Muth, Thilo, Mehta, Subina, Kumar, Praveen, Johnson, James, Gruening, Bjoern Andreas, Schiebenhoefer, Henning, Kolmeder, Carolin A, Fuchs, Stephan, Nunn, Brook L, Rudney, Joel, Griffin, Timothy J, Jagtap, Pratik D
Format:	Artikel
Sprache:	eng
Schlagworte:	Algorithms Amino Acid Sequence Annotations Biofilms Biology and Life Sciences Bioreactors Computer and Information Sciences Computer programs Datasets Dental caries Dysbiosis - microbiology Engineering and Technology Functional analysis Functional groups Galaxies Gene Ontology Genetic aspects Mass spectrometry Mass spectroscopy Metagenomics Microbiological research Microbiomes Microbiota Microorganisms Ontology Open source software Peptides Peptides - analysis Peptides - chemistry Physiological aspects Polls & surveys Principal components analysis Proteins Proteomes Proteomics Research and Analysis Methods Scientific imaging Search algorithms Software Software development tools Sucrose Sugar Surveys and Questionnaires Taxonomy Workflow
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