Potato (Solanum tuberosum L.) tuber-root modeling method based on physical properties
The development of tuber-root models based on the physical properties of the root system of a plant is a prominent but complicated task. In this paper, a method for the construction of a 3D model of a potato tuber-root system is proposed, based on determining the characterization parameters of the p...
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| Veröffentlicht in: | PloS one 2020-09, Vol.15 (9), p.e0239093-e0239093 |
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| creator | Zhao, Ping Tian, Yue Li, Yongkui Xu, Guofa Tian, Subo Huang, Zichen Gangopadhyay, Moumita |
| description | The development of tuber-root models based on the physical properties of the root system of a plant is a prominent but complicated task. In this paper, a method for the construction of a 3D model of a potato tuber-root system is proposed, based on determining the characterization parameters of the potato tuber-root model. Three early maturing potato varieties, widely planted in Northeast China, were selected as the research objects. Their topological and geometric structures were analyzed to determine the model parameters. By actually digging potatoes in the field, field data measurement and statistical analysis of the parameters were performed, and a model parameter database was established. Based on the measured data, the root trajectory points were obtained by simulating the growth of the root tips. Then MATLAB was used to develop a system that would complete the construction of the potato tuber-root 3D visualization model. Finally, the accuracy of the model was verified experimentally. Case studies for the three different types indicated an acceptable performance of the proposed model, with a relative root mean square error of 6.81% and 15.32%, for the minimum and maximum values, respectively. The research results can be used to explore the interaction between the soil-tuber-root aggregates and the digging components, and provide a reference for the construction of root models of other tuber crops. |
| doi_str_mv | 10.1371/journal.pone.0239093 |
| format | Article |
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In this paper, a method for the construction of a 3D model of a potato tuber-root system is proposed, based on determining the characterization parameters of the potato tuber-root model. Three early maturing potato varieties, widely planted in Northeast China, were selected as the research objects. Their topological and geometric structures were analyzed to determine the model parameters. By actually digging potatoes in the field, field data measurement and statistical analysis of the parameters were performed, and a model parameter database was established. Based on the measured data, the root trajectory points were obtained by simulating the growth of the root tips. Then MATLAB was used to develop a system that would complete the construction of the potato tuber-root 3D visualization model. Finally, the accuracy of the model was verified experimentally. Case studies for the three different types indicated an acceptable performance of the proposed model, with a relative root mean square error of 6.81% and 15.32%, for the minimum and maximum values, respectively. The research results can be used to explore the interaction between the soil-tuber-root aggregates and the digging components, and provide a reference for the construction of root models of other tuber crops.</description><identifier>ISSN: 1932-6203</identifier><identifier>EISSN: 1932-6203</identifier><identifier>DOI: 10.1371/journal.pone.0239093</identifier><identifier>PMID: 32941480</identifier><language>eng</language><publisher>San Francisco: Public Library of Science</publisher><subject>Accuracy ; Biology and Life Sciences ; Computer simulation ; Construction ; Crop diseases ; Crops ; Engineering schools ; Harvest ; Mathematical models ; Model accuracy ; Parameters ; Physical properties ; Physical Sciences ; Physiological aspects ; Potatoes ; Research and Analysis Methods ; Roots ; Roots (Botany) ; Seeds ; Solanum tuberosum ; Statistical analysis ; Statistical analysis of data ; Three dimensional models ; Tubers ; Vegetables</subject><ispartof>PloS one, 2020-09, Vol.15 (9), p.e0239093-e0239093</ispartof><rights>COPYRIGHT 2020 Public Library of Science</rights><rights>2020 Zhao et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>2020 Zhao et al 2020 Zhao et al</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c570t-75d9ab7e2044b2d50fd5e60fab550bc8c3cc34ea5fe4ff4fba486c2d050eb3063</citedby><cites>FETCH-LOGICAL-c570t-75d9ab7e2044b2d50fd5e60fab550bc8c3cc34ea5fe4ff4fba486c2d050eb3063</cites><orcidid>0000-0002-5451-6227</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC7498077/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC7498077/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,864,885,2102,2928,23866,27924,27925,53791,53793,79600,79601</link.rule.ids></links><search><contributor>Gangopadhyay, Moumita</contributor><creatorcontrib>Zhao, Ping</creatorcontrib><creatorcontrib>Tian, Yue</creatorcontrib><creatorcontrib>Li, Yongkui</creatorcontrib><creatorcontrib>Xu, Guofa</creatorcontrib><creatorcontrib>Tian, Subo</creatorcontrib><creatorcontrib>Huang, Zichen</creatorcontrib><creatorcontrib>Gangopadhyay, Moumita</creatorcontrib><title>Potato (Solanum tuberosum L.) tuber-root modeling method based on physical properties</title><title>PloS one</title><description>The development of tuber-root models based on the physical properties of the root system of a plant is a prominent but complicated task. In this paper, a method for the construction of a 3D model of a potato tuber-root system is proposed, based on determining the characterization parameters of the potato tuber-root model. Three early maturing potato varieties, widely planted in Northeast China, were selected as the research objects. Their topological and geometric structures were analyzed to determine the model parameters. By actually digging potatoes in the field, field data measurement and statistical analysis of the parameters were performed, and a model parameter database was established. Based on the measured data, the root trajectory points were obtained by simulating the growth of the root tips. Then MATLAB was used to develop a system that would complete the construction of the potato tuber-root 3D visualization model. Finally, the accuracy of the model was verified experimentally. Case studies for the three different types indicated an acceptable performance of the proposed model, with a relative root mean square error of 6.81% and 15.32%, for the minimum and maximum values, respectively. The research results can be used to explore the interaction between the soil-tuber-root aggregates and the digging components, and provide a reference for the construction of root models of other tuber crops.</description><subject>Accuracy</subject><subject>Biology and Life Sciences</subject><subject>Computer simulation</subject><subject>Construction</subject><subject>Crop diseases</subject><subject>Crops</subject><subject>Engineering schools</subject><subject>Harvest</subject><subject>Mathematical models</subject><subject>Model accuracy</subject><subject>Parameters</subject><subject>Physical properties</subject><subject>Physical Sciences</subject><subject>Physiological aspects</subject><subject>Potatoes</subject><subject>Research and Analysis Methods</subject><subject>Roots</subject><subject>Roots (Botany)</subject><subject>Seeds</subject><subject>Solanum tuberosum</subject><subject>Statistical analysis</subject><subject>Statistical analysis of data</subject><subject>Three dimensional 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Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Zhao, Ping</au><au>Tian, Yue</au><au>Li, Yongkui</au><au>Xu, Guofa</au><au>Tian, Subo</au><au>Huang, Zichen</au><au>Gangopadhyay, Moumita</au><au>Gangopadhyay, Moumita</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Potato (Solanum tuberosum L.) tuber-root modeling method based on physical properties</atitle><jtitle>PloS one</jtitle><date>2020-09-17</date><risdate>2020</risdate><volume>15</volume><issue>9</issue><spage>e0239093</spage><epage>e0239093</epage><pages>e0239093-e0239093</pages><issn>1932-6203</issn><eissn>1932-6203</eissn><abstract>The development of tuber-root models based on the physical properties of the root system of a plant is a prominent but complicated task. In this paper, a method for the construction of a 3D model of a potato tuber-root system is proposed, based on determining the characterization parameters of the potato tuber-root model. Three early maturing potato varieties, widely planted in Northeast China, were selected as the research objects. Their topological and geometric structures were analyzed to determine the model parameters. By actually digging potatoes in the field, field data measurement and statistical analysis of the parameters were performed, and a model parameter database was established. Based on the measured data, the root trajectory points were obtained by simulating the growth of the root tips. Then MATLAB was used to develop a system that would complete the construction of the potato tuber-root 3D visualization model. Finally, the accuracy of the model was verified experimentally. Case studies for the three different types indicated an acceptable performance of the proposed model, with a relative root mean square error of 6.81% and 15.32%, for the minimum and maximum values, respectively. The research results can be used to explore the interaction between the soil-tuber-root aggregates and the digging components, and provide a reference for the construction of root models of other tuber crops.</abstract><cop>San Francisco</cop><pub>Public Library of Science</pub><pmid>32941480</pmid><doi>10.1371/journal.pone.0239093</doi><orcidid>https://orcid.org/0000-0002-5451-6227</orcidid><oa>free_for_read</oa></addata></record> |
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| subjects | Accuracy Biology and Life Sciences Computer simulation Construction Crop diseases Crops Engineering schools Harvest Mathematical models Model accuracy Parameters Physical properties Physical Sciences Physiological aspects Potatoes Research and Analysis Methods Roots Roots (Botany) Seeds Solanum tuberosum Statistical analysis Statistical analysis of data Three dimensional models Tubers Vegetables |
| title | Potato (Solanum tuberosum L.) tuber-root modeling method based on physical properties |
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