Isolation and characterization of thermophilic cellulose and hemicellulose degrading bacterium, Thermoanaerobacterium sp. R63 from tropical dry deciduous forest soil
Thermophilic microorganisms and their enzymes have been utilized in various industrial applications. In this work, we isolated and characterized thermophilic anaerobic bacteria with the cellulose and hemicellulose degrading activities from a tropical dry deciduous forest in northern Thailand. Out of...
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| Veröffentlicht in: | PloS one 2020-07, Vol.15 (7), p.e0236518-e0236518 |
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| creator | Harnvoravongchai, Phurt Singwisut, Ratiyakorn Ounjai, Puey Aroonnual, Amornrat Kosiyachinda, Pahol Janvilisri, Tavan Chankhamhaengdecha, Surang |
| description | Thermophilic microorganisms and their enzymes have been utilized in various industrial applications. In this work, we isolated and characterized thermophilic anaerobic bacteria with the cellulose and hemicellulose degrading activities from a tropical dry deciduous forest in northern Thailand. Out of 502 isolated thermophilic anaerobic soil bacteria, 6 isolates, identified as Thermoanaerobacterium sp., displayed an ability to utilize a wide range of oligosaccharides and lignocellulosic substrates. The isolates exhibited significant cellulase and xylanase activities at high temperature (65°C). Among all isolates, Thermoanaerobacterium sp. strain R63 exhibited remarkable hydrolytic properties with the highest cellulase and xylanase activities at 1.15 U/mg and 6.17 U/mg, respectively. Extracellular extract of Thermoanaerobacterium sp. strain R63 was thermostable with an optimal temperature at 65°C and could exhibit enzymatic activities on pH range 5.0–9.0. Our findings suggest promising applications of these thermoanaerobic bacteria and their potent enzymes for industrial purposes. |
| doi_str_mv | 10.1371/journal.pone.0236518 |
| format | Article |
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R63 from tropical dry deciduous forest soil</title><source>DOAJ Directory of Open Access Journals</source><source>Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals</source><source>Public Library of Science (PLoS)</source><source>PubMed Central</source><source>Free Full-Text Journals in Chemistry</source><creator>Harnvoravongchai, Phurt ; Singwisut, Ratiyakorn ; Ounjai, Puey ; Aroonnual, Amornrat ; Kosiyachinda, Pahol ; Janvilisri, Tavan ; Chankhamhaengdecha, Surang</creator><contributor>Bhunia, Arun K.</contributor><creatorcontrib>Harnvoravongchai, Phurt ; Singwisut, Ratiyakorn ; Ounjai, Puey ; Aroonnual, Amornrat ; Kosiyachinda, Pahol ; Janvilisri, Tavan ; Chankhamhaengdecha, Surang ; Bhunia, Arun K.</creatorcontrib><description>Thermophilic microorganisms and their enzymes have been utilized in various industrial applications. In this work, we isolated and characterized thermophilic anaerobic bacteria with the cellulose and hemicellulose degrading activities from a tropical dry deciduous forest in northern Thailand. Out of 502 isolated thermophilic anaerobic soil bacteria, 6 isolates, identified as Thermoanaerobacterium sp., displayed an ability to utilize a wide range of oligosaccharides and lignocellulosic substrates. The isolates exhibited significant cellulase and xylanase activities at high temperature (65°C). Among all isolates, Thermoanaerobacterium sp. strain R63 exhibited remarkable hydrolytic properties with the highest cellulase and xylanase activities at 1.15 U/mg and 6.17 U/mg, respectively. Extracellular extract of Thermoanaerobacterium sp. strain R63 was thermostable with an optimal temperature at 65°C and could exhibit enzymatic activities on pH range 5.0–9.0. Our findings suggest promising applications of these thermoanaerobic bacteria and their potent enzymes for industrial purposes.</description><identifier>ISSN: 1932-6203</identifier><identifier>EISSN: 1932-6203</identifier><identifier>DOI: 10.1371/journal.pone.0236518</identifier><identifier>PMID: 32702033</identifier><language>eng</language><publisher>San Francisco: Public Library of Science</publisher><subject>Anaerobic bacteria ; Bacteria ; Biology ; Biology and Life Sciences ; Biomass ; Cellulase ; Cellulose ; Deciduous forests ; Deoxyribonucleic acid ; DNA ; Dry forests ; Ecology and Environmental Sciences ; Enzymatic activity ; Enzymes ; Forest soils ; Glucose ; Hemicellulose ; High temperature ; Industrial applications ; Investigations ; Lignocellulose ; Microorganisms ; Oligosaccharides ; Phenols ; Physical Sciences ; Soil bacteria ; Soil microorganisms ; Soils ; Substrates ; Thermoanaerobacterium ; Thermophilic bacteria ; Thermophilic microorganisms ; Tropical forests ; Xylanase</subject><ispartof>PloS one, 2020-07, Vol.15 (7), p.e0236518-e0236518</ispartof><rights>2020 Harnvoravongchai et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>2020 Harnvoravongchai et al 2020 Harnvoravongchai et al</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c503t-12590c58d48d1ec57bd7ed710b2e2d79f756e7b9aa89b5b1ce82e956c16094213</citedby><cites>FETCH-LOGICAL-c503t-12590c58d48d1ec57bd7ed710b2e2d79f756e7b9aa89b5b1ce82e956c16094213</cites><orcidid>0000-0002-5414-4072</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC7377481/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC7377481/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,725,778,782,862,883,2098,2917,23849,27907,27908,53774,53776,79351,79352</link.rule.ids></links><search><contributor>Bhunia, Arun K.</contributor><creatorcontrib>Harnvoravongchai, Phurt</creatorcontrib><creatorcontrib>Singwisut, Ratiyakorn</creatorcontrib><creatorcontrib>Ounjai, Puey</creatorcontrib><creatorcontrib>Aroonnual, Amornrat</creatorcontrib><creatorcontrib>Kosiyachinda, Pahol</creatorcontrib><creatorcontrib>Janvilisri, Tavan</creatorcontrib><creatorcontrib>Chankhamhaengdecha, Surang</creatorcontrib><title>Isolation and characterization of thermophilic cellulose and hemicellulose degrading bacterium, Thermoanaerobacterium sp. R63 from tropical dry deciduous forest soil</title><title>PloS one</title><description>Thermophilic microorganisms and their enzymes have been utilized in various industrial applications. In this work, we isolated and characterized thermophilic anaerobic bacteria with the cellulose and hemicellulose degrading activities from a tropical dry deciduous forest in northern Thailand. Out of 502 isolated thermophilic anaerobic soil bacteria, 6 isolates, identified as Thermoanaerobacterium sp., displayed an ability to utilize a wide range of oligosaccharides and lignocellulosic substrates. The isolates exhibited significant cellulase and xylanase activities at high temperature (65°C). Among all isolates, Thermoanaerobacterium sp. strain R63 exhibited remarkable hydrolytic properties with the highest cellulase and xylanase activities at 1.15 U/mg and 6.17 U/mg, respectively. Extracellular extract of Thermoanaerobacterium sp. strain R63 was thermostable with an optimal temperature at 65°C and could exhibit enzymatic activities on pH range 5.0–9.0. Our findings suggest promising applications of these thermoanaerobic bacteria and their potent enzymes for industrial purposes.</description><subject>Anaerobic bacteria</subject><subject>Bacteria</subject><subject>Biology</subject><subject>Biology and Life Sciences</subject><subject>Biomass</subject><subject>Cellulase</subject><subject>Cellulose</subject><subject>Deciduous forests</subject><subject>Deoxyribonucleic acid</subject><subject>DNA</subject><subject>Dry forests</subject><subject>Ecology and Environmental Sciences</subject><subject>Enzymatic activity</subject><subject>Enzymes</subject><subject>Forest soils</subject><subject>Glucose</subject><subject>Hemicellulose</subject><subject>High temperature</subject><subject>Industrial applications</subject><subject>Investigations</subject><subject>Lignocellulose</subject><subject>Microorganisms</subject><subject>Oligosaccharides</subject><subject>Phenols</subject><subject>Physical Sciences</subject><subject>Soil bacteria</subject><subject>Soil microorganisms</subject><subject>Soils</subject><subject>Substrates</subject><subject>Thermoanaerobacterium</subject><subject>Thermophilic bacteria</subject><subject>Thermophilic microorganisms</subject><subject>Tropical forests</subject><subject>Xylanase</subject><issn>1932-6203</issn><issn>1932-6203</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2020</creationdate><recordtype>article</recordtype><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><sourceid>DOA</sourceid><recordid>eNptUl2L1DAULaK46-o_EAz44oMz5qNJ2hdBll0dWBBkfQ63ye1MhrSpSSus_8f_aWc6rq74lHBy7rnnntyieMnomgnN3u3jlHoI6yH2uKZcKMmqR8U5qwVfKU7F47_uZ8WznPeUSlEp9bQ4E1zTGRbnxc9NjgFGH3sCvSN2BwnsiMn_WMDYknGHqYvDzgdvicUQphAzHuk77PwfxOE2gfP9ljSLxtS9JbfHaugBU7yHSR7W5IsSpE2xI2OKg7cQiEt3s4j1bopTJm1MmEeSow_PiycthIwvTudF8fX66vby0-rm88fN5YeblZVUjCvGZU2trFxZOYZW6sZpdJrRhiN3um61VKibGqCqG9kwixXHWirLFK1LzsRF8WrRHeaBzCnhbHjJlRSc03JmbBaGi7A3Q_IdpDsTwZsjENPWQBq9DWgso1IC403tRImsrMTch0vaCIBaCZi13p-6TU2HzmI_JggPRB--9H5ntvG70ULrsjrYfXMSSPHbNIdlOp8P_wE9zgkefGtBayXlTH39D_X_05ULy6aYc8L23gyj5rB1v6vMYevMaevELx3Rz7Q</recordid><startdate>20200723</startdate><enddate>20200723</enddate><creator>Harnvoravongchai, Phurt</creator><creator>Singwisut, Ratiyakorn</creator><creator>Ounjai, Puey</creator><creator>Aroonnual, Amornrat</creator><creator>Kosiyachinda, Pahol</creator><creator>Janvilisri, Tavan</creator><creator>Chankhamhaengdecha, Surang</creator><general>Public Library of Science</general><general>Public Library of Science (PLoS)</general><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7QG</scope><scope>7QL</scope><scope>7QO</scope><scope>7RV</scope><scope>7SN</scope><scope>7SS</scope><scope>7T5</scope><scope>7TG</scope><scope>7TM</scope><scope>7U9</scope><scope>7X2</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8AO</scope><scope>8C1</scope><scope>8FD</scope><scope>8FE</scope><scope>8FG</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABJCF</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>ARAPS</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BGLVJ</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>D1I</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>KB.</scope><scope>KB0</scope><scope>KL.</scope><scope>L6V</scope><scope>LK8</scope><scope>M0K</scope><scope>M0S</scope><scope>M1P</scope><scope>M7N</scope><scope>M7P</scope><scope>M7S</scope><scope>NAPCQ</scope><scope>P5Z</scope><scope>P62</scope><scope>P64</scope><scope>PATMY</scope><scope>PDBOC</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PTHSS</scope><scope>PYCSY</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope><orcidid>https://orcid.org/0000-0002-5414-4072</orcidid></search><sort><creationdate>20200723</creationdate><title>Isolation and characterization of thermophilic cellulose and hemicellulose degrading bacterium, Thermoanaerobacterium sp. R63 from tropical dry deciduous forest soil</title><author>Harnvoravongchai, Phurt ; Singwisut, Ratiyakorn ; Ounjai, Puey ; Aroonnual, Amornrat ; Kosiyachinda, Pahol ; Janvilisri, Tavan ; Chankhamhaengdecha, Surang</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c503t-12590c58d48d1ec57bd7ed710b2e2d79f756e7b9aa89b5b1ce82e956c16094213</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2020</creationdate><topic>Anaerobic bacteria</topic><topic>Bacteria</topic><topic>Biology</topic><topic>Biology and Life Sciences</topic><topic>Biomass</topic><topic>Cellulase</topic><topic>Cellulose</topic><topic>Deciduous forests</topic><topic>Deoxyribonucleic acid</topic><topic>DNA</topic><topic>Dry forests</topic><topic>Ecology and Environmental Sciences</topic><topic>Enzymatic activity</topic><topic>Enzymes</topic><topic>Forest soils</topic><topic>Glucose</topic><topic>Hemicellulose</topic><topic>High temperature</topic><topic>Industrial applications</topic><topic>Investigations</topic><topic>Lignocellulose</topic><topic>Microorganisms</topic><topic>Oligosaccharides</topic><topic>Phenols</topic><topic>Physical Sciences</topic><topic>Soil bacteria</topic><topic>Soil microorganisms</topic><topic>Soils</topic><topic>Substrates</topic><topic>Thermoanaerobacterium</topic><topic>Thermophilic bacteria</topic><topic>Thermophilic microorganisms</topic><topic>Tropical forests</topic><topic>Xylanase</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Harnvoravongchai, Phurt</creatorcontrib><creatorcontrib>Singwisut, Ratiyakorn</creatorcontrib><creatorcontrib>Ounjai, Puey</creatorcontrib><creatorcontrib>Aroonnual, Amornrat</creatorcontrib><creatorcontrib>Kosiyachinda, Pahol</creatorcontrib><creatorcontrib>Janvilisri, Tavan</creatorcontrib><creatorcontrib>Chankhamhaengdecha, Surang</creatorcontrib><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Animal Behavior Abstracts</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Biotechnology Research Abstracts</collection><collection>Nursing & Allied Health Database</collection><collection>Ecology Abstracts</collection><collection>Entomology Abstracts (Full archive)</collection><collection>Immunology Abstracts</collection><collection>Meteorological & Geoastrophysical Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Agricultural Science Collection</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Medical Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Public Health Database</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Technology Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>Materials Science & Engineering Collection</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest One Sustainability</collection><collection>ProQuest Central UK/Ireland</collection><collection>Advanced Technologies & Aerospace Collection</collection><collection>Agricultural & Environmental Science Collection</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Technology Collection (ProQuest)</collection><collection>Natural Science Collection (ProQuest)</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Materials Science Collection</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Materials Science Database</collection><collection>Nursing & Allied Health Database (Alumni Edition)</collection><collection>Meteorological & Geoastrophysical Abstracts - 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R63 from tropical dry deciduous forest soil</atitle><jtitle>PloS one</jtitle><date>2020-07-23</date><risdate>2020</risdate><volume>15</volume><issue>7</issue><spage>e0236518</spage><epage>e0236518</epage><pages>e0236518-e0236518</pages><issn>1932-6203</issn><eissn>1932-6203</eissn><abstract>Thermophilic microorganisms and their enzymes have been utilized in various industrial applications. In this work, we isolated and characterized thermophilic anaerobic bacteria with the cellulose and hemicellulose degrading activities from a tropical dry deciduous forest in northern Thailand. Out of 502 isolated thermophilic anaerobic soil bacteria, 6 isolates, identified as Thermoanaerobacterium sp., displayed an ability to utilize a wide range of oligosaccharides and lignocellulosic substrates. The isolates exhibited significant cellulase and xylanase activities at high temperature (65°C). Among all isolates, Thermoanaerobacterium sp. strain R63 exhibited remarkable hydrolytic properties with the highest cellulase and xylanase activities at 1.15 U/mg and 6.17 U/mg, respectively. Extracellular extract of Thermoanaerobacterium sp. strain R63 was thermostable with an optimal temperature at 65°C and could exhibit enzymatic activities on pH range 5.0–9.0. Our findings suggest promising applications of these thermoanaerobic bacteria and their potent enzymes for industrial purposes.</abstract><cop>San Francisco</cop><pub>Public Library of Science</pub><pmid>32702033</pmid><doi>10.1371/journal.pone.0236518</doi><orcidid>https://orcid.org/0000-0002-5414-4072</orcidid><oa>free_for_read</oa></addata></record> |
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| subjects | Anaerobic bacteria Bacteria Biology Biology and Life Sciences Biomass Cellulase Cellulose Deciduous forests Deoxyribonucleic acid DNA Dry forests Ecology and Environmental Sciences Enzymatic activity Enzymes Forest soils Glucose Hemicellulose High temperature Industrial applications Investigations Lignocellulose Microorganisms Oligosaccharides Phenols Physical Sciences Soil bacteria Soil microorganisms Soils Substrates Thermoanaerobacterium Thermophilic bacteria Thermophilic microorganisms Tropical forests Xylanase |
| title | Isolation and characterization of thermophilic cellulose and hemicellulose degrading bacterium, Thermoanaerobacterium sp. R63 from tropical dry deciduous forest soil |
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