Enabling animal rabies diagnostic in low-access areas: Sensitivity and specificity of a molecular diagnostic test from cerebral tissue dried on filter paper

Rabies is a lethal zoonotic encephalomyelitis that causes an estimated 59,000 human deaths yearly worldwide. Although developing countries of Asia and Africa bear the heaviest burden, surveillance and disease detection in these countries is often hampered by the absence of local laboratories able to...

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Veröffentlicht in:PLoS neglected tropical diseases 2020-03, Vol.14 (3), p.e0008116-e0008116
Hauptverfasser: Rasolonjatovo, Felana Suzah, Guis, Hélène, Rajeev, Malavika, Dacheux, Laurent, Arivony Nomenjanahary, Lalaina, Razafitrimo, Girard, Rafisandrantantsoa, Jean Théophile, Cêtre-Sossah, Catherine, Heraud, Jean-Michel, Andriamandimby, Soa Fy
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container_issue 3
container_start_page e0008116
container_title PLoS neglected tropical diseases
container_volume 14
creator Rasolonjatovo, Felana Suzah
Guis, Hélène
Rajeev, Malavika
Dacheux, Laurent
Arivony Nomenjanahary, Lalaina
Razafitrimo, Girard
Rafisandrantantsoa, Jean Théophile
Cêtre-Sossah, Catherine
Heraud, Jean-Michel
Andriamandimby, Soa Fy
description Rabies is a lethal zoonotic encephalomyelitis that causes an estimated 59,000 human deaths yearly worldwide. Although developing countries of Asia and Africa bear the heaviest burden, surveillance and disease detection in these countries is often hampered by the absence of local laboratories able to diagnose rabies and/or the difficulties of sample shipment from low-access areas to national reference laboratories. Filter papers offer a convenient cost-effective alternative for the sampling, shipment, and storage of biological materials for the diagnosis of many pathogens including rabies virus, yet the properties of diagnostic tests using this support have not been evaluated thoroughly. Sensitivity and specificity of molecular diagnosis of rabies infection using a reverse transcription followed by a hemi-nested polymerase chain reaction (RT-hn-PCR) either directly on brain tissue or using brain tissue dried on filter paper were assessed on 113 suspected field animal samples in comparison to the direct fluorescent antibody test (FAT) recommended by the World Health Organization as one of the reference tests for rabies diagnosis. Impact of the duration of the storage was also evaluated. The sensitivity and the specificity of RT-hn-PCR i) on brain tissue were 96.6% (95% CI: [88.1-99.6]) and 92.7% (95% CI: [82.4-98.0]) respectively and ii) on brain tissue dried on filter paper 100% (95% CI: [93.8-100.0]) and 90.9% (95% CI: [80.0-97.0]) respectively. No loss of sensitivity of RT-hn-PCR on samples of brain tissue dried on filter paper left 7 days at ambient temperature was detected indicating that this method would enable analyzing impregnated filter papers sent to the national reference laboratory at ambient temperature within a 1-week shipment time. It could therefore be an effective alternative to facilitate storage and shipment of samples from low-access areas to enhance and expand rabies surveillance.
doi_str_mv 10.1371/journal.pntd.0008116
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No loss of sensitivity of RT-hn-PCR on samples of brain tissue dried on filter paper left 7 days at ambient temperature was detected indicating that this method would enable analyzing impregnated filter papers sent to the national reference laboratory at ambient temperature within a 1-week shipment time. 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Although developing countries of Asia and Africa bear the heaviest burden, surveillance and disease detection in these countries is often hampered by the absence of local laboratories able to diagnose rabies and/or the difficulties of sample shipment from low-access areas to national reference laboratories. Filter papers offer a convenient cost-effective alternative for the sampling, shipment, and storage of biological materials for the diagnosis of many pathogens including rabies virus, yet the properties of diagnostic tests using this support have not been evaluated thoroughly. 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No loss of sensitivity of RT-hn-PCR on samples of brain tissue dried on filter paper left 7 days at ambient temperature was detected indicating that this method would enable analyzing impregnated filter papers sent to the national reference laboratory at ambient temperature within a 1-week shipment time. 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Although developing countries of Asia and Africa bear the heaviest burden, surveillance and disease detection in these countries is often hampered by the absence of local laboratories able to diagnose rabies and/or the difficulties of sample shipment from low-access areas to national reference laboratories. Filter papers offer a convenient cost-effective alternative for the sampling, shipment, and storage of biological materials for the diagnosis of many pathogens including rabies virus, yet the properties of diagnostic tests using this support have not been evaluated thoroughly. Sensitivity and specificity of molecular diagnosis of rabies infection using a reverse transcription followed by a hemi-nested polymerase chain reaction (RT-hn-PCR) either directly on brain tissue or using brain tissue dried on filter paper were assessed on 113 suspected field animal samples in comparison to the direct fluorescent antibody test (FAT) recommended by the World Health Organization as one of the reference tests for rabies diagnosis. Impact of the duration of the storage was also evaluated. The sensitivity and the specificity of RT-hn-PCR i) on brain tissue were 96.6% (95% CI: [88.1-99.6]) and 92.7% (95% CI: [82.4-98.0]) respectively and ii) on brain tissue dried on filter paper 100% (95% CI: [93.8-100.0]) and 90.9% (95% CI: [80.0-97.0]) respectively. No loss of sensitivity of RT-hn-PCR on samples of brain tissue dried on filter paper left 7 days at ambient temperature was detected indicating that this method would enable analyzing impregnated filter papers sent to the national reference laboratory at ambient temperature within a 1-week shipment time. It could therefore be an effective alternative to facilitate storage and shipment of samples from low-access areas to enhance and expand rabies surveillance.</abstract><cop>United States</cop><pub>Public Library of Science</pub><pmid>32142519</pmid><doi>10.1371/journal.pntd.0008116</doi><orcidid>https://orcid.org/0000-0002-0355-0898</orcidid><orcidid>https://orcid.org/0000-0002-4401-3706</orcidid><orcidid>https://orcid.org/0000-0002-6397-836X</orcidid><orcidid>https://orcid.org/0000-0003-1107-0859</orcidid><oa>free_for_read</oa></addata></record>
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identifier ISSN: 1935-2735
ispartof PLoS neglected tropical diseases, 2020-03, Vol.14 (3), p.e0008116-e0008116
issn 1935-2735
1935-2727
1935-2735
language eng
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source MEDLINE; DOAJ Directory of Open Access Journals; Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals; PubMed Central Open Access; Public Library of Science (PLoS); PubMed Central
subjects Access
Africa
Ambient temperature
Animals
Antibodies
Asia
Authorship
Biological materials
Biology and Life Sciences
Brain
Brain - virology
Brain research
Countries
Desiccation - methods
Developing Countries
Diagnosis
Diagnostic systems
Diagnostic tests
Disease detection
Disease recognition
DNA
Encephalomyelitis
Engineering and Technology
Epidemiology
Evaluation
Fatalities
Filter paper
Fluorescence
Fluorescent antibody test
Funding
Health aspects
Human health and pathology
Infectious diseases
Laboratories
LDCs
Life Sciences
Lyssavirus
Medicine and Health Sciences
Molecular diagnostic techniques
Molecular Diagnostic Techniques - methods
Nucleotide sequence
Pathogens
PCR
Polymerase Chain Reaction
Rabies
Rabies - diagnosis
Rabies virus - genetics
Rabies virus - isolation & purification
Research and Analysis Methods
Reverse Transcriptase Polymerase Chain Reaction
Reverse transcription
Samples
Santé publique et épidémiologie
Sensitivity analysis
Sensitivity and Specificity
Software
Specificity
Specimen Handling - methods
Storage
Supervision
Surveillance
Temperature
Tissue
Tissues
Transcription
Tropical diseases
Virology
Viruses
Zoonoses
title Enabling animal rabies diagnostic in low-access areas: Sensitivity and specificity of a molecular diagnostic test from cerebral tissue dried on filter paper
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