Challenges associated with homologous directed repair using CRISPR-Cas9 and TALEN to edit the DMD genetic mutation in canine Duchenne muscular dystrophy
Duchenne muscular dystrophy (DMD) is caused by mutations in the DMD gene that abolish the expression of dystrophin protein. Dogs with the genetic homologue, golden retriever muscular dystrophy dog (GRMD), have a splice site mutation that leads to skipping of exon 7 and a stop codon in the DMD transc...
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description | Duchenne muscular dystrophy (DMD) is caused by mutations in the DMD gene that abolish the expression of dystrophin protein. Dogs with the genetic homologue, golden retriever muscular dystrophy dog (GRMD), have a splice site mutation that leads to skipping of exon 7 and a stop codon in the DMD transcript. Gene editing via homology-directed repair (HDR) has been used in the mdx mouse model of DMD but not in GRMD. In this study, we used clustered regularly interspaced short palindromic repeats (CRISPR) and transcription activator-like effector nucleases (TALEN) to restore dystrophin expression via HDR in myoblasts/myotubes and later via intramuscular injection of GRMD dogs. In vitro, DNA and RNA were successfully corrected but dystrophin protein was not translated. With intramuscular injection of two different guide arms, sgRNA A and B, there was mRNA expression and Sanger sequencing confirmed inclusion of exon 7 for all treatments. On Western blot analysis, protein expression of up to 6% of normal levels was seen in two dogs injected with sgRNA B and up to 16% of normal in one dog treated with sgRNA A. TALEN did not restore any dystrophin expression. While there were no adverse effects, clear benefits were not seen on histopathologic analysis, immunofluorescence microscopy, and force measurements. Based on these results, methods must be modified to increase the efficiency of HDR-mediated gene repair and protein expression. |
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Dogs with the genetic homologue, golden retriever muscular dystrophy dog (GRMD), have a splice site mutation that leads to skipping of exon 7 and a stop codon in the DMD transcript. Gene editing via homology-directed repair (HDR) has been used in the mdx mouse model of DMD but not in GRMD. In this study, we used clustered regularly interspaced short palindromic repeats (CRISPR) and transcription activator-like effector nucleases (TALEN) to restore dystrophin expression via HDR in myoblasts/myotubes and later via intramuscular injection of GRMD dogs. In vitro, DNA and RNA were successfully corrected but dystrophin protein was not translated. With intramuscular injection of two different guide arms, sgRNA A and B, there was mRNA expression and Sanger sequencing confirmed inclusion of exon 7 for all treatments. On Western blot analysis, protein expression of up to 6% of normal levels was seen in two dogs injected with sgRNA B and up to 16% of normal in one dog treated with sgRNA A. TALEN did not restore any dystrophin expression. While there were no adverse effects, clear benefits were not seen on histopathologic analysis, immunofluorescence microscopy, and force measurements. Based on these results, methods must be modified to increase the efficiency of HDR-mediated gene repair and protein expression.</description><identifier>ISSN: 1932-6203</identifier><identifier>EISSN: 1932-6203</identifier><identifier>DOI: 10.1371/journal.pone.0228072</identifier><identifier>PMID: 31961902</identifier><language>eng</language><publisher>United States: Public Library of Science</publisher><subject>Analysis ; Animals ; Biology and Life Sciences ; Codons ; CRISPR ; CRISPR-Cas Systems - genetics ; Deoxyribonucleic acid ; DNA ; DNA binding proteins ; DNA sequencing ; Dogs ; Duchenne muscular dystrophy ; Duchenne's muscular dystrophy ; Dystrophin ; Dystrophin - genetics ; Dystrophy ; EDTA ; Engineering and technology ; Fluorescent antibody technique ; Force measurement ; Gene Editing - methods ; Gene expression ; Gene mutation ; Gene sequencing ; Genes ; Genetic modification ; Genetic research ; Genetic Therapy - methods ; Genome editing ; Homology ; Immunofluorescence ; Injection ; Medicine and Health Sciences ; Messenger RNA ; Microscopy ; Muscular dystrophy ; Muscular Dystrophy, Duchenne - genetics ; Muscular Dystrophy, Duchenne - therapy ; Mutation ; Myoblasts ; Myoblasts - cytology ; Myoblasts - metabolism ; Myotubes ; Neomycin ; Nuclease ; Nucleases ; Plasmids ; Proteins ; Repair ; Research and Analysis Methods ; Retirement benefits ; RNA ; Stop codon ; Transcription ; Transcription activator-like effector nucleases ; Transcription Activator-Like Effector Nucleases - genetics ; Utrophin ; Veterinary colleges</subject><ispartof>PloS one, 2020-01, Vol.15 (1), p.e0228072-e0228072</ispartof><rights>COPYRIGHT 2020 Public Library of Science</rights><rights>2020 Mata López et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>2020 Mata López et al 2020 Mata López et al</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c692t-55dca60c907de4dad44007eef44c75f32b447d461f96942b799447fbfb166dd73</citedby><cites>FETCH-LOGICAL-c692t-55dca60c907de4dad44007eef44c75f32b447d461f96942b799447fbfb166dd73</cites><orcidid>0000-0002-0280-7217</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC6974172/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC6974172/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,864,885,2102,2928,23866,27924,27925,53791,53793</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/31961902$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><contributor>Kumar, Ashok</contributor><creatorcontrib>Mata López, Sara</creatorcontrib><creatorcontrib>Balog-Alvarez, Cynthia</creatorcontrib><creatorcontrib>Vitha, Stanislav</creatorcontrib><creatorcontrib>Bettis, Amanda K</creatorcontrib><creatorcontrib>Canessa, Emily H</creatorcontrib><creatorcontrib>Kornegay, Joe N</creatorcontrib><creatorcontrib>Nghiem, Peter P</creatorcontrib><title>Challenges associated with homologous directed repair using CRISPR-Cas9 and TALEN to edit the DMD genetic mutation in canine Duchenne muscular dystrophy</title><title>PloS one</title><addtitle>PLoS One</addtitle><description>Duchenne muscular dystrophy (DMD) is caused by mutations in the DMD gene that abolish the expression of dystrophin protein. Dogs with the genetic homologue, golden retriever muscular dystrophy dog (GRMD), have a splice site mutation that leads to skipping of exon 7 and a stop codon in the DMD transcript. Gene editing via homology-directed repair (HDR) has been used in the mdx mouse model of DMD but not in GRMD. In this study, we used clustered regularly interspaced short palindromic repeats (CRISPR) and transcription activator-like effector nucleases (TALEN) to restore dystrophin expression via HDR in myoblasts/myotubes and later via intramuscular injection of GRMD dogs. In vitro, DNA and RNA were successfully corrected but dystrophin protein was not translated. With intramuscular injection of two different guide arms, sgRNA A and B, there was mRNA expression and Sanger sequencing confirmed inclusion of exon 7 for all treatments. On Western blot analysis, protein expression of up to 6% of normal levels was seen in two dogs injected with sgRNA B and up to 16% of normal in one dog treated with sgRNA A. TALEN did not restore any dystrophin expression. While there were no adverse effects, clear benefits were not seen on histopathologic analysis, immunofluorescence microscopy, and force measurements. Based on these results, methods must be modified to increase the efficiency of HDR-mediated gene repair and protein expression.</description><subject>Analysis</subject><subject>Animals</subject><subject>Biology and Life Sciences</subject><subject>Codons</subject><subject>CRISPR</subject><subject>CRISPR-Cas Systems - genetics</subject><subject>Deoxyribonucleic acid</subject><subject>DNA</subject><subject>DNA binding proteins</subject><subject>DNA sequencing</subject><subject>Dogs</subject><subject>Duchenne muscular dystrophy</subject><subject>Duchenne's muscular dystrophy</subject><subject>Dystrophin</subject><subject>Dystrophin - genetics</subject><subject>Dystrophy</subject><subject>EDTA</subject><subject>Engineering and technology</subject><subject>Fluorescent antibody technique</subject><subject>Force measurement</subject><subject>Gene Editing - methods</subject><subject>Gene expression</subject><subject>Gene mutation</subject><subject>Gene sequencing</subject><subject>Genes</subject><subject>Genetic modification</subject><subject>Genetic research</subject><subject>Genetic Therapy - methods</subject><subject>Genome editing</subject><subject>Homology</subject><subject>Immunofluorescence</subject><subject>Injection</subject><subject>Medicine and Health Sciences</subject><subject>Messenger RNA</subject><subject>Microscopy</subject><subject>Muscular dystrophy</subject><subject>Muscular Dystrophy, Duchenne - genetics</subject><subject>Muscular Dystrophy, Duchenne - therapy</subject><subject>Mutation</subject><subject>Myoblasts</subject><subject>Myoblasts - cytology</subject><subject>Myoblasts - metabolism</subject><subject>Myotubes</subject><subject>Neomycin</subject><subject>Nuclease</subject><subject>Nucleases</subject><subject>Plasmids</subject><subject>Proteins</subject><subject>Repair</subject><subject>Research and Analysis Methods</subject><subject>Retirement benefits</subject><subject>RNA</subject><subject>Stop codon</subject><subject>Transcription</subject><subject>Transcription activator-like effector nucleases</subject><subject>Transcription Activator-Like Effector Nucleases - 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genetics</topic><topic>Deoxyribonucleic acid</topic><topic>DNA</topic><topic>DNA binding proteins</topic><topic>DNA sequencing</topic><topic>Dogs</topic><topic>Duchenne muscular dystrophy</topic><topic>Duchenne's muscular dystrophy</topic><topic>Dystrophin</topic><topic>Dystrophin - genetics</topic><topic>Dystrophy</topic><topic>EDTA</topic><topic>Engineering and technology</topic><topic>Fluorescent antibody technique</topic><topic>Force measurement</topic><topic>Gene Editing - methods</topic><topic>Gene expression</topic><topic>Gene mutation</topic><topic>Gene sequencing</topic><topic>Genes</topic><topic>Genetic modification</topic><topic>Genetic research</topic><topic>Genetic Therapy - methods</topic><topic>Genome editing</topic><topic>Homology</topic><topic>Immunofluorescence</topic><topic>Injection</topic><topic>Medicine and Health Sciences</topic><topic>Messenger RNA</topic><topic>Microscopy</topic><topic>Muscular dystrophy</topic><topic>Muscular Dystrophy, Duchenne - genetics</topic><topic>Muscular Dystrophy, Duchenne - 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Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>PloS one</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Mata López, Sara</au><au>Balog-Alvarez, Cynthia</au><au>Vitha, Stanislav</au><au>Bettis, Amanda K</au><au>Canessa, Emily H</au><au>Kornegay, Joe N</au><au>Nghiem, Peter P</au><au>Kumar, Ashok</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Challenges associated with homologous directed repair using CRISPR-Cas9 and TALEN to edit the DMD genetic mutation in canine Duchenne muscular dystrophy</atitle><jtitle>PloS one</jtitle><addtitle>PLoS One</addtitle><date>2020-01-21</date><risdate>2020</risdate><volume>15</volume><issue>1</issue><spage>e0228072</spage><epage>e0228072</epage><pages>e0228072-e0228072</pages><issn>1932-6203</issn><eissn>1932-6203</eissn><abstract>Duchenne muscular dystrophy (DMD) is caused by mutations in the DMD gene that abolish the expression of dystrophin protein. Dogs with the genetic homologue, golden retriever muscular dystrophy dog (GRMD), have a splice site mutation that leads to skipping of exon 7 and a stop codon in the DMD transcript. Gene editing via homology-directed repair (HDR) has been used in the mdx mouse model of DMD but not in GRMD. In this study, we used clustered regularly interspaced short palindromic repeats (CRISPR) and transcription activator-like effector nucleases (TALEN) to restore dystrophin expression via HDR in myoblasts/myotubes and later via intramuscular injection of GRMD dogs. In vitro, DNA and RNA were successfully corrected but dystrophin protein was not translated. With intramuscular injection of two different guide arms, sgRNA A and B, there was mRNA expression and Sanger sequencing confirmed inclusion of exon 7 for all treatments. On Western blot analysis, protein expression of up to 6% of normal levels was seen in two dogs injected with sgRNA B and up to 16% of normal in one dog treated with sgRNA A. TALEN did not restore any dystrophin expression. While there were no adverse effects, clear benefits were not seen on histopathologic analysis, immunofluorescence microscopy, and force measurements. Based on these results, methods must be modified to increase the efficiency of HDR-mediated gene repair and protein expression.</abstract><cop>United States</cop><pub>Public Library of Science</pub><pmid>31961902</pmid><doi>10.1371/journal.pone.0228072</doi><tpages>e0228072</tpages><orcidid>https://orcid.org/0000-0002-0280-7217</orcidid><oa>free_for_read</oa></addata></record> |
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recordid | cdi_plos_journals_2343022295 |
source | MEDLINE; DOAJ Directory of Open Access Journals; Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals; Public Library of Science (PLoS) Journals Open Access; PubMed Central; Free Full-Text Journals in Chemistry |
subjects | Analysis Animals Biology and Life Sciences Codons CRISPR CRISPR-Cas Systems - genetics Deoxyribonucleic acid DNA DNA binding proteins DNA sequencing Dogs Duchenne muscular dystrophy Duchenne's muscular dystrophy Dystrophin Dystrophin - genetics Dystrophy EDTA Engineering and technology Fluorescent antibody technique Force measurement Gene Editing - methods Gene expression Gene mutation Gene sequencing Genes Genetic modification Genetic research Genetic Therapy - methods Genome editing Homology Immunofluorescence Injection Medicine and Health Sciences Messenger RNA Microscopy Muscular dystrophy Muscular Dystrophy, Duchenne - genetics Muscular Dystrophy, Duchenne - therapy Mutation Myoblasts Myoblasts - cytology Myoblasts - metabolism Myotubes Neomycin Nuclease Nucleases Plasmids Proteins Repair Research and Analysis Methods Retirement benefits RNA Stop codon Transcription Transcription activator-like effector nucleases Transcription Activator-Like Effector Nucleases - genetics Utrophin Veterinary colleges |
title | Challenges associated with homologous directed repair using CRISPR-Cas9 and TALEN to edit the DMD genetic mutation in canine Duchenne muscular dystrophy |
url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2024-12-23T17%3A07%3A54IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-gale_plos_&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Challenges%20associated%20with%20homologous%20directed%20repair%20using%20CRISPR-Cas9%20and%20TALEN%20to%20edit%20the%20DMD%C2%A0genetic%20mutation%20in%20canine%20Duchenne%20muscular%20dystrophy&rft.jtitle=PloS%20one&rft.au=Mata%20L%C3%B3pez,%20Sara&rft.date=2020-01-21&rft.volume=15&rft.issue=1&rft.spage=e0228072&rft.epage=e0228072&rft.pages=e0228072-e0228072&rft.issn=1932-6203&rft.eissn=1932-6203&rft_id=info:doi/10.1371/journal.pone.0228072&rft_dat=%3Cgale_plos_%3EA611897768%3C/gale_plos_%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=2343022295&rft_id=info:pmid/31961902&rft_galeid=A611897768&rft_doaj_id=oai_doaj_org_article_5d359478a6644a74a36775ec8ab4dde0&rfr_iscdi=true |