Nedd8 hydrolysis by UCH proteases in Plasmodium parasites
Plasmodium parasites are the causative agents of malaria, a disease with wide public health repercussions. Increasing drug resistance and the absence of a vaccine make finding new chemotherapeutic strategies imperative. Components of the ubiquitin and ubiquitin-like pathways have garnered increased...
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creator | Karpiyevich, Maryia Adjalley, Sophie Mol, Marco Ascher, David B Mason, Bethany van der Heden van Noort, Gerbrand J Laman, Heike Ovaa, Huib Lee, Marcus C S Artavanis-Tsakonas, Katerina |
description | Plasmodium parasites are the causative agents of malaria, a disease with wide public health repercussions. Increasing drug resistance and the absence of a vaccine make finding new chemotherapeutic strategies imperative. Components of the ubiquitin and ubiquitin-like pathways have garnered increased attention as novel targets given their necessity to parasite survival. Understanding how these pathways are regulated in Plasmodium and identifying differences to the host is paramount to selectively interfering with parasites. Here, we focus on Nedd8 modification in Plasmodium falciparum, given its central role to cell division and DNA repair, processes critical to Plasmodium parasites given their unusual cell cycle and requirement for refined repair mechanisms. By applying a functional chemical approach, we show that deNeddylation is controlled by a different set of enzymes in the parasite versus the human host. We elucidate the molecular determinants of the unusual dual ubiquitin/Nedd8 recognition by the essential PfUCH37 enzyme and, through parasite transgenics and drug assays, determine that only its ubiquitin activity is critical to parasite survival. Our experiments reveal interesting evolutionary differences in how neddylation is controlled in higher versus lower eukaryotes, and highlight the Nedd8 pathway as worthy of further exploration for therapeutic targeting in antimalarial drug design. |
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Increasing drug resistance and the absence of a vaccine make finding new chemotherapeutic strategies imperative. Components of the ubiquitin and ubiquitin-like pathways have garnered increased attention as novel targets given their necessity to parasite survival. Understanding how these pathways are regulated in Plasmodium and identifying differences to the host is paramount to selectively interfering with parasites. Here, we focus on Nedd8 modification in Plasmodium falciparum, given its central role to cell division and DNA repair, processes critical to Plasmodium parasites given their unusual cell cycle and requirement for refined repair mechanisms. By applying a functional chemical approach, we show that deNeddylation is controlled by a different set of enzymes in the parasite versus the human host. We elucidate the molecular determinants of the unusual dual ubiquitin/Nedd8 recognition by the essential PfUCH37 enzyme and, through parasite transgenics and drug assays, determine that only its ubiquitin activity is critical to parasite survival. Our experiments reveal interesting evolutionary differences in how neddylation is controlled in higher versus lower eukaryotes, and highlight the Nedd8 pathway as worthy of further exploration for therapeutic targeting in antimalarial drug design.</description><identifier>ISSN: 1553-7374</identifier><identifier>ISSN: 1553-7366</identifier><identifier>EISSN: 1553-7374</identifier><identifier>DOI: 10.1371/journal.ppat.1008086</identifier><identifier>PMID: 31658303</identifier><language>eng</language><publisher>United States: Public Library of Science</publisher><subject>Amino Acid Sequence ; Amino acids ; Analysis ; Antimalarial agents ; Antimalarials ; Antimalarials - pharmacology ; Biochemistry ; Biology and Life Sciences ; Care and treatment ; Cell cycle ; Cell division ; Cell Line ; Chemotherapy ; Deoxyribonucleic acid ; DNA ; DNA repair ; Drug development ; Drug resistance ; Enzymes ; Eukaryotes ; HEK293 Cells ; Humans ; Hydrolysis ; Malaria ; Malaria, Falciparum - drug therapy ; Malaria, Falciparum - pathology ; Medicine and Health Sciences ; NEDD8 Protein - metabolism ; Organic chemistry ; Parasites ; Pathogens ; Pathology ; Pathways ; Physical Sciences ; Plasmodium ; Plasmodium falciparum ; Plasmodium falciparum - metabolism ; Proteases ; Proteins ; Public health ; Public health movements ; Repair ; Risk factors ; Supervision ; Survival ; Therapeutic targets ; Ubiquitin ; Ubiquitin Thiolesterase - metabolism ; Ubiquitin-Protein Ligases - metabolism ; Ubiquitination - physiology ; Vaccines ; Vector-borne diseases</subject><ispartof>PLoS pathogens, 2019-10, Vol.15 (10), p.e1008086-e1008086</ispartof><rights>COPYRIGHT 2019 Public Library of Science</rights><rights>2019 Karpiyevich et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>2019 Karpiyevich et al 2019 Karpiyevich et al</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c661t-843bfb943b3bbc5d56a62cb6ec7a870794a967f9477cf8a53719f04704b354973</citedby><cites>FETCH-LOGICAL-c661t-843bfb943b3bbc5d56a62cb6ec7a870794a967f9477cf8a53719f04704b354973</cites><orcidid>0000-0003-2948-2413 ; 0000-0003-1164-1965 ; 0000-0002-4973-0915 ; 0000-0002-3722-2841 ; 0000-0002-1157-0469 ; 0000-0002-6089-171X ; 0000-0001-5955-6431</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC6837540/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC6837540/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,723,776,780,860,881,2096,2915,23845,27901,27902,53766,53768,79343,79344</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/31658303$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Karpiyevich, Maryia</creatorcontrib><creatorcontrib>Adjalley, Sophie</creatorcontrib><creatorcontrib>Mol, Marco</creatorcontrib><creatorcontrib>Ascher, David B</creatorcontrib><creatorcontrib>Mason, Bethany</creatorcontrib><creatorcontrib>van der Heden van Noort, Gerbrand J</creatorcontrib><creatorcontrib>Laman, Heike</creatorcontrib><creatorcontrib>Ovaa, Huib</creatorcontrib><creatorcontrib>Lee, Marcus C S</creatorcontrib><creatorcontrib>Artavanis-Tsakonas, Katerina</creatorcontrib><title>Nedd8 hydrolysis by UCH proteases in Plasmodium parasites</title><title>PLoS pathogens</title><addtitle>PLoS Pathog</addtitle><description>Plasmodium parasites are the causative agents of malaria, a disease with wide public health repercussions. Increasing drug resistance and the absence of a vaccine make finding new chemotherapeutic strategies imperative. Components of the ubiquitin and ubiquitin-like pathways have garnered increased attention as novel targets given their necessity to parasite survival. Understanding how these pathways are regulated in Plasmodium and identifying differences to the host is paramount to selectively interfering with parasites. Here, we focus on Nedd8 modification in Plasmodium falciparum, given its central role to cell division and DNA repair, processes critical to Plasmodium parasites given their unusual cell cycle and requirement for refined repair mechanisms. By applying a functional chemical approach, we show that deNeddylation is controlled by a different set of enzymes in the parasite versus the human host. We elucidate the molecular determinants of the unusual dual ubiquitin/Nedd8 recognition by the essential PfUCH37 enzyme and, through parasite transgenics and drug assays, determine that only its ubiquitin activity is critical to parasite survival. Our experiments reveal interesting evolutionary differences in how neddylation is controlled in higher versus lower eukaryotes, and highlight the Nedd8 pathway as worthy of further exploration for therapeutic targeting in antimalarial drug design.</description><subject>Amino Acid Sequence</subject><subject>Amino acids</subject><subject>Analysis</subject><subject>Antimalarial agents</subject><subject>Antimalarials</subject><subject>Antimalarials - pharmacology</subject><subject>Biochemistry</subject><subject>Biology and Life Sciences</subject><subject>Care and treatment</subject><subject>Cell cycle</subject><subject>Cell division</subject><subject>Cell Line</subject><subject>Chemotherapy</subject><subject>Deoxyribonucleic acid</subject><subject>DNA</subject><subject>DNA repair</subject><subject>Drug development</subject><subject>Drug resistance</subject><subject>Enzymes</subject><subject>Eukaryotes</subject><subject>HEK293 Cells</subject><subject>Humans</subject><subject>Hydrolysis</subject><subject>Malaria</subject><subject>Malaria, Falciparum - drug therapy</subject><subject>Malaria, Falciparum - pathology</subject><subject>Medicine and Health Sciences</subject><subject>NEDD8 Protein - metabolism</subject><subject>Organic chemistry</subject><subject>Parasites</subject><subject>Pathogens</subject><subject>Pathology</subject><subject>Pathways</subject><subject>Physical Sciences</subject><subject>Plasmodium</subject><subject>Plasmodium falciparum</subject><subject>Plasmodium falciparum - metabolism</subject><subject>Proteases</subject><subject>Proteins</subject><subject>Public health</subject><subject>Public health movements</subject><subject>Repair</subject><subject>Risk factors</subject><subject>Supervision</subject><subject>Survival</subject><subject>Therapeutic targets</subject><subject>Ubiquitin</subject><subject>Ubiquitin Thiolesterase - metabolism</subject><subject>Ubiquitin-Protein Ligases - metabolism</subject><subject>Ubiquitination - physiology</subject><subject>Vaccines</subject><subject>Vector-borne diseases</subject><issn>1553-7374</issn><issn>1553-7366</issn><issn>1553-7374</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2019</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>BENPR</sourceid><sourceid>DOA</sourceid><recordid>eNqVkk1v1DAQhiMEoqXwDxBE4lIOu9jxV3xBqlaFrlQVBPRsjR1n61USp3aC2H-Pt5tWDeoFWRpb42fe8WtNlr3FaImJwJ-2fgwdNMu-h2GJESpRyZ9lx5gxshBE0OePzkfZqxi3CFFMMH-ZHaXISoLIcSavbFWV-c2uCr7ZRRdzvcuvVxd5H_xgIdqYuy7_3kBsfeXGNu8hQHSDja-zFzU00b6Z9pPs-sv5r9XF4vLb1_Xq7HJhOMfDoqRE11qmSLQ2rGIceGE0t0ZAKZCQFCQXtaRCmLoElqzJGlGBqCaMSkFOsvcH3b7xUU2uoyoIppIQIYtErA9E5WGr-uBaCDvlwam7hA8bBWFwprEKGyi4kRxZKmhdWM00MRprSrmgpd1rfZ66jbq1lbHdEKCZic5vOnejNv634iURjKIkcDoJBH872jio1kVjmwY668e7dyOCMMUsoR_-QZ92N1EbSAZcV_vU1-xF1RlHtKSoQDxRyyeotCrbOuM7W7uUnxV8nBUkZrB_hg2MMar1zx__wV7NWXpgTfAxBls__B1Gaj-49ybVfnDVNLip7N3jf38oup9U8hdsaOaQ</recordid><startdate>20191028</startdate><enddate>20191028</enddate><creator>Karpiyevich, Maryia</creator><creator>Adjalley, Sophie</creator><creator>Mol, Marco</creator><creator>Ascher, David B</creator><creator>Mason, Bethany</creator><creator>van der Heden van Noort, Gerbrand J</creator><creator>Laman, Heike</creator><creator>Ovaa, Huib</creator><creator>Lee, Marcus C S</creator><creator>Artavanis-Tsakonas, Katerina</creator><general>Public Library of Science</general><general>Public Library of Science (PLoS)</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>ISN</scope><scope>ISR</scope><scope>3V.</scope><scope>7QL</scope><scope>7U9</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M7P</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope><orcidid>https://orcid.org/0000-0003-2948-2413</orcidid><orcidid>https://orcid.org/0000-0003-1164-1965</orcidid><orcidid>https://orcid.org/0000-0002-4973-0915</orcidid><orcidid>https://orcid.org/0000-0002-3722-2841</orcidid><orcidid>https://orcid.org/0000-0002-1157-0469</orcidid><orcidid>https://orcid.org/0000-0002-6089-171X</orcidid><orcidid>https://orcid.org/0000-0001-5955-6431</orcidid></search><sort><creationdate>20191028</creationdate><title>Nedd8 hydrolysis by UCH proteases in Plasmodium parasites</title><author>Karpiyevich, Maryia ; Adjalley, Sophie ; Mol, Marco ; Ascher, David B ; Mason, Bethany ; van der Heden van Noort, Gerbrand J ; Laman, Heike ; Ovaa, Huib ; Lee, Marcus C S ; Artavanis-Tsakonas, Katerina</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c661t-843bfb943b3bbc5d56a62cb6ec7a870794a967f9477cf8a53719f04704b354973</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2019</creationdate><topic>Amino Acid Sequence</topic><topic>Amino acids</topic><topic>Analysis</topic><topic>Antimalarial agents</topic><topic>Antimalarials</topic><topic>Antimalarials - pharmacology</topic><topic>Biochemistry</topic><topic>Biology and Life Sciences</topic><topic>Care and treatment</topic><topic>Cell cycle</topic><topic>Cell division</topic><topic>Cell Line</topic><topic>Chemotherapy</topic><topic>Deoxyribonucleic acid</topic><topic>DNA</topic><topic>DNA repair</topic><topic>Drug development</topic><topic>Drug resistance</topic><topic>Enzymes</topic><topic>Eukaryotes</topic><topic>HEK293 Cells</topic><topic>Humans</topic><topic>Hydrolysis</topic><topic>Malaria</topic><topic>Malaria, Falciparum - drug therapy</topic><topic>Malaria, Falciparum - pathology</topic><topic>Medicine and Health Sciences</topic><topic>NEDD8 Protein - metabolism</topic><topic>Organic chemistry</topic><topic>Parasites</topic><topic>Pathogens</topic><topic>Pathology</topic><topic>Pathways</topic><topic>Physical Sciences</topic><topic>Plasmodium</topic><topic>Plasmodium falciparum</topic><topic>Plasmodium falciparum - metabolism</topic><topic>Proteases</topic><topic>Proteins</topic><topic>Public health</topic><topic>Public health movements</topic><topic>Repair</topic><topic>Risk factors</topic><topic>Supervision</topic><topic>Survival</topic><topic>Therapeutic targets</topic><topic>Ubiquitin</topic><topic>Ubiquitin Thiolesterase - 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Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>PLoS pathogens</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Karpiyevich, Maryia</au><au>Adjalley, Sophie</au><au>Mol, Marco</au><au>Ascher, David B</au><au>Mason, Bethany</au><au>van der Heden van Noort, Gerbrand J</au><au>Laman, Heike</au><au>Ovaa, Huib</au><au>Lee, Marcus C S</au><au>Artavanis-Tsakonas, Katerina</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Nedd8 hydrolysis by UCH proteases in Plasmodium parasites</atitle><jtitle>PLoS pathogens</jtitle><addtitle>PLoS Pathog</addtitle><date>2019-10-28</date><risdate>2019</risdate><volume>15</volume><issue>10</issue><spage>e1008086</spage><epage>e1008086</epage><pages>e1008086-e1008086</pages><issn>1553-7374</issn><issn>1553-7366</issn><eissn>1553-7374</eissn><abstract>Plasmodium parasites are the causative agents of malaria, a disease with wide public health repercussions. Increasing drug resistance and the absence of a vaccine make finding new chemotherapeutic strategies imperative. Components of the ubiquitin and ubiquitin-like pathways have garnered increased attention as novel targets given their necessity to parasite survival. Understanding how these pathways are regulated in Plasmodium and identifying differences to the host is paramount to selectively interfering with parasites. Here, we focus on Nedd8 modification in Plasmodium falciparum, given its central role to cell division and DNA repair, processes critical to Plasmodium parasites given their unusual cell cycle and requirement for refined repair mechanisms. By applying a functional chemical approach, we show that deNeddylation is controlled by a different set of enzymes in the parasite versus the human host. We elucidate the molecular determinants of the unusual dual ubiquitin/Nedd8 recognition by the essential PfUCH37 enzyme and, through parasite transgenics and drug assays, determine that only its ubiquitin activity is critical to parasite survival. Our experiments reveal interesting evolutionary differences in how neddylation is controlled in higher versus lower eukaryotes, and highlight the Nedd8 pathway as worthy of further exploration for therapeutic targeting in antimalarial drug design.</abstract><cop>United States</cop><pub>Public Library of Science</pub><pmid>31658303</pmid><doi>10.1371/journal.ppat.1008086</doi><orcidid>https://orcid.org/0000-0003-2948-2413</orcidid><orcidid>https://orcid.org/0000-0003-1164-1965</orcidid><orcidid>https://orcid.org/0000-0002-4973-0915</orcidid><orcidid>https://orcid.org/0000-0002-3722-2841</orcidid><orcidid>https://orcid.org/0000-0002-1157-0469</orcidid><orcidid>https://orcid.org/0000-0002-6089-171X</orcidid><orcidid>https://orcid.org/0000-0001-5955-6431</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Amino Acid Sequence Amino acids Analysis Antimalarial agents Antimalarials Antimalarials - pharmacology Biochemistry Biology and Life Sciences Care and treatment Cell cycle Cell division Cell Line Chemotherapy Deoxyribonucleic acid DNA DNA repair Drug development Drug resistance Enzymes Eukaryotes HEK293 Cells Humans Hydrolysis Malaria Malaria, Falciparum - drug therapy Malaria, Falciparum - pathology Medicine and Health Sciences NEDD8 Protein - metabolism Organic chemistry Parasites Pathogens Pathology Pathways Physical Sciences Plasmodium Plasmodium falciparum Plasmodium falciparum - metabolism Proteases Proteins Public health Public health movements Repair Risk factors Supervision Survival Therapeutic targets Ubiquitin Ubiquitin Thiolesterase - metabolism Ubiquitin-Protein Ligases - metabolism Ubiquitination - physiology Vaccines Vector-borne diseases |
title | Nedd8 hydrolysis by UCH proteases in Plasmodium parasites |
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