A single phosphoacceptor residue in BGLF3 is essential for transcription of Epstein-Barr virus late genes
Almost one third of herpesvirus proteins are expressed with late kinetics. Many of these late proteins serve crucial structural functions such as formation of virus particles, attachment to host cells and internalization. Recently, we and others identified a group of Epstein-Barr virus early protein...
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description | Almost one third of herpesvirus proteins are expressed with late kinetics. Many of these late proteins serve crucial structural functions such as formation of virus particles, attachment to host cells and internalization. Recently, we and others identified a group of Epstein-Barr virus early proteins that form a pre-initiation complex (vPIC) dedicated to transcription of late genes. Currently, there is a fundamental gap in understanding the role of post-translational modifications in regulating assembly and function of the complex. Here, we used mass spectrometry to map potential phosphorylation sites in BGLF3, a core component of the vPIC module that connects the BcRF1 viral TATA box binding protein to other components of the complex. We identified threonine 42 (T42) in BGLF3 as a phosphoacceptor residue. T42 is conserved in BGLF3 orthologs encoded by other gamma herpesviruses. Abolishing phosphorylation at T42 markedly reduced expression of vPIC-dependent late genes and disrupted production of new virus particles, but had no effect on early gene expression, viral DNA replication, or expression of vPIC-independent late genes. We complemented failure of BGLF3(T42A) to activate late gene expression by ectopic expression of other components of vPIC. Only BFRF2 and BVLF1 were sufficient to suppress the defect in late gene expression associated with BGLF3(T42A). These results were corroborated by the ability of wild type BGLF3 but not BGLF3(T42A) to form a trimeric complex with BFRF2 and BVLF1. Our findings suggest that phosphorylation of BGLF3 at threonine 42 serves as a new checkpoint for subsequent formation of BFRF2:BGLF3:BVLF1; a trimeric subcomplex essential for transcription of late genes. Our findings provide evidence that post-translational modifications regulate the function of the vPIC nanomachine that initiates synthesis of late transcripts in herpesviruses. |
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Many of these late proteins serve crucial structural functions such as formation of virus particles, attachment to host cells and internalization. Recently, we and others identified a group of Epstein-Barr virus early proteins that form a pre-initiation complex (vPIC) dedicated to transcription of late genes. Currently, there is a fundamental gap in understanding the role of post-translational modifications in regulating assembly and function of the complex. Here, we used mass spectrometry to map potential phosphorylation sites in BGLF3, a core component of the vPIC module that connects the BcRF1 viral TATA box binding protein to other components of the complex. We identified threonine 42 (T42) in BGLF3 as a phosphoacceptor residue. T42 is conserved in BGLF3 orthologs encoded by other gamma herpesviruses. Abolishing phosphorylation at T42 markedly reduced expression of vPIC-dependent late genes and disrupted production of new virus particles, but had no effect on early gene expression, viral DNA replication, or expression of vPIC-independent late genes. We complemented failure of BGLF3(T42A) to activate late gene expression by ectopic expression of other components of vPIC. Only BFRF2 and BVLF1 were sufficient to suppress the defect in late gene expression associated with BGLF3(T42A). These results were corroborated by the ability of wild type BGLF3 but not BGLF3(T42A) to form a trimeric complex with BFRF2 and BVLF1. Our findings suggest that phosphorylation of BGLF3 at threonine 42 serves as a new checkpoint for subsequent formation of BFRF2:BGLF3:BVLF1; a trimeric subcomplex essential for transcription of late genes. Our findings provide evidence that post-translational modifications regulate the function of the vPIC nanomachine that initiates synthesis of late transcripts in herpesviruses.</description><identifier>ISSN: 1553-7374</identifier><identifier>ISSN: 1553-7366</identifier><identifier>EISSN: 1553-7374</identifier><identifier>DOI: 10.1371/journal.ppat.1007980</identifier><identifier>PMID: 31461506</identifier><language>eng</language><publisher>United States: Public Library of Science</publisher><subject>Amino Acid Sequence ; Amino acids ; Binding sites ; Biology and Life Sciences ; Cell division ; Deoxyribonucleic acid ; DNA ; DNA biosynthesis ; DNA Replication ; DNA, Viral - genetics ; Ectopic expression ; Epstein-Barr virus ; Gastric cancer ; Gene expression ; Gene Expression Regulation, Viral ; Genes ; Genetic aspects ; Genomes ; Health aspects ; HEK293 Cells ; Herpesvirus 4, Human - genetics ; Herpesviruses ; Humans ; Initiation complex ; Internalization ; Kinases ; Kinetics ; Mass spectrometry ; Mass spectroscopy ; Mutation ; Pediatrics ; Phosphorylation ; Physical Sciences ; Post-translation ; Protein Binding ; Proteins ; RNA polymerase ; Sequence Homology ; Signal transduction ; Spectroscopy ; Stomach cancer ; Structure ; Tata box ; Threonine ; Threonine - chemistry ; Threonine - genetics ; Threonine - metabolism ; Transcription ; Transcription (Genetics) ; Transcription, Genetic ; Translation ; Viral proteins ; Viral Proteins - chemistry ; Viral Proteins - genetics ; Viral Proteins - metabolism ; Virology ; Virus Replication ; Viruses</subject><ispartof>PLoS pathogens, 2019-08, Vol.15 (8), p.e1007980-e1007980</ispartof><rights>COPYRIGHT 2019 Public Library of Science</rights><rights>2019 Li et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>2019 Li et al 2019 Li et al</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c727t-b761c289723d58cedef8e87760d149ca5609cb328ffed37c18d2ef178f70dfd63</citedby><cites>FETCH-LOGICAL-c727t-b761c289723d58cedef8e87760d149ca5609cb328ffed37c18d2ef178f70dfd63</cites><orcidid>0000-0001-6118-6951 ; 0000-0002-1744-6274</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC6713331/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC6713331/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,723,776,780,860,881,2096,2915,23845,27901,27902,53766,53768,79343,79344</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/31461506$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Li, Jinlin</creatorcontrib><creatorcontrib>Walsh, Ann</creatorcontrib><creatorcontrib>Lam, TuKiet T</creatorcontrib><creatorcontrib>Delecluse, Henri-Jacques</creatorcontrib><creatorcontrib>El-Guindy, Ayman</creatorcontrib><title>A single phosphoacceptor residue in BGLF3 is essential for transcription of Epstein-Barr virus late genes</title><title>PLoS pathogens</title><addtitle>PLoS Pathog</addtitle><description>Almost one third of herpesvirus proteins are expressed with late kinetics. Many of these late proteins serve crucial structural functions such as formation of virus particles, attachment to host cells and internalization. Recently, we and others identified a group of Epstein-Barr virus early proteins that form a pre-initiation complex (vPIC) dedicated to transcription of late genes. Currently, there is a fundamental gap in understanding the role of post-translational modifications in regulating assembly and function of the complex. Here, we used mass spectrometry to map potential phosphorylation sites in BGLF3, a core component of the vPIC module that connects the BcRF1 viral TATA box binding protein to other components of the complex. We identified threonine 42 (T42) in BGLF3 as a phosphoacceptor residue. T42 is conserved in BGLF3 orthologs encoded by other gamma herpesviruses. Abolishing phosphorylation at T42 markedly reduced expression of vPIC-dependent late genes and disrupted production of new virus particles, but had no effect on early gene expression, viral DNA replication, or expression of vPIC-independent late genes. We complemented failure of BGLF3(T42A) to activate late gene expression by ectopic expression of other components of vPIC. Only BFRF2 and BVLF1 were sufficient to suppress the defect in late gene expression associated with BGLF3(T42A). These results were corroborated by the ability of wild type BGLF3 but not BGLF3(T42A) to form a trimeric complex with BFRF2 and BVLF1. Our findings suggest that phosphorylation of BGLF3 at threonine 42 serves as a new checkpoint for subsequent formation of BFRF2:BGLF3:BVLF1; a trimeric subcomplex essential for transcription of late genes. Our findings provide evidence that post-translational modifications regulate the function of the vPIC nanomachine that initiates synthesis of late transcripts in herpesviruses.</description><subject>Amino Acid Sequence</subject><subject>Amino acids</subject><subject>Binding sites</subject><subject>Biology and Life Sciences</subject><subject>Cell division</subject><subject>Deoxyribonucleic acid</subject><subject>DNA</subject><subject>DNA biosynthesis</subject><subject>DNA Replication</subject><subject>DNA, Viral - genetics</subject><subject>Ectopic expression</subject><subject>Epstein-Barr virus</subject><subject>Gastric cancer</subject><subject>Gene expression</subject><subject>Gene Expression Regulation, Viral</subject><subject>Genes</subject><subject>Genetic aspects</subject><subject>Genomes</subject><subject>Health aspects</subject><subject>HEK293 Cells</subject><subject>Herpesvirus 4, Human - genetics</subject><subject>Herpesviruses</subject><subject>Humans</subject><subject>Initiation complex</subject><subject>Internalization</subject><subject>Kinases</subject><subject>Kinetics</subject><subject>Mass spectrometry</subject><subject>Mass spectroscopy</subject><subject>Mutation</subject><subject>Pediatrics</subject><subject>Phosphorylation</subject><subject>Physical Sciences</subject><subject>Post-translation</subject><subject>Protein Binding</subject><subject>Proteins</subject><subject>RNA polymerase</subject><subject>Sequence Homology</subject><subject>Signal transduction</subject><subject>Spectroscopy</subject><subject>Stomach cancer</subject><subject>Structure</subject><subject>Tata box</subject><subject>Threonine</subject><subject>Threonine - chemistry</subject><subject>Threonine - genetics</subject><subject>Threonine - metabolism</subject><subject>Transcription</subject><subject>Transcription (Genetics)</subject><subject>Transcription, Genetic</subject><subject>Translation</subject><subject>Viral proteins</subject><subject>Viral Proteins - chemistry</subject><subject>Viral Proteins - genetics</subject><subject>Viral Proteins - metabolism</subject><subject>Virology</subject><subject>Virus Replication</subject><subject>Viruses</subject><issn>1553-7374</issn><issn>1553-7366</issn><issn>1553-7374</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2019</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>BENPR</sourceid><sourceid>DOA</sourceid><recordid>eNqVkl1vFCEUhidGY2v1Hxgl8UYvdoVhZpi5Mdk2bd1ko4kf1-QsHLY0szAFptF_L-tOm67pjSEEAs95D-fwFsVrRueMC_bx2o_BQT8fBkhzRqnoWvqkOGZ1zWeCi-rpg_1R8SLGa0orxlnzvDjirGpYTZvjwi5ItG7TIxmufMwTlMIh-UACRqtHJNaR08vVBSc2EowRXbLQE5OJFMBFFeyQrHfEG3I-xITWzU4hBHJrwxhJDwnJBh3Gl8UzA33EV9N6Uvy8OP9x9nm2-nq5PFusZkqUIs3WomGqbDtRcl23CjWaFlshGqpZ1SmoG9qpNS9bY1BzoVirSzRMtEZQbXTDT4q3e92h91FOXYqyLDtWiY5ymonlntAeruUQ7BbCb-nByr8HPmwkhGRVj7KCxtQUUHcGKtUB1KbSUNYtpR3V2GWtT1O2cb1FrXJ7AvQHooc3zl7Jjb-VjWCcc5YF3k8Cwd-MGJPc2qiw78GhH3fvbsuqzr_LM_ruH_Tx6iZqA7kA64zPedVOVC6abIGyYd2Omj9C5aFxa5V3aGw-Pwj4cBCQmYS_0gbGGOXy-7f_YL8cstWeVcHHGNDc945RuTP6XZFyZ3Q5GT2HvXnY9_ugO2fzPyLs-cA</recordid><startdate>20190828</startdate><enddate>20190828</enddate><creator>Li, Jinlin</creator><creator>Walsh, Ann</creator><creator>Lam, TuKiet T</creator><creator>Delecluse, Henri-Jacques</creator><creator>El-Guindy, Ayman</creator><general>Public Library of Science</general><general>Public Library of Science (PLoS)</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>ISN</scope><scope>ISR</scope><scope>3V.</scope><scope>7QL</scope><scope>7U9</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M7P</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope><orcidid>https://orcid.org/0000-0001-6118-6951</orcidid><orcidid>https://orcid.org/0000-0002-1744-6274</orcidid></search><sort><creationdate>20190828</creationdate><title>A single phosphoacceptor residue in BGLF3 is essential for transcription of Epstein-Barr virus late genes</title><author>Li, Jinlin ; Walsh, Ann ; Lam, TuKiet T ; Delecluse, Henri-Jacques ; El-Guindy, Ayman</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c727t-b761c289723d58cedef8e87760d149ca5609cb328ffed37c18d2ef178f70dfd63</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2019</creationdate><topic>Amino Acid Sequence</topic><topic>Amino acids</topic><topic>Binding sites</topic><topic>Biology and Life Sciences</topic><topic>Cell division</topic><topic>Deoxyribonucleic acid</topic><topic>DNA</topic><topic>DNA biosynthesis</topic><topic>DNA Replication</topic><topic>DNA, Viral - genetics</topic><topic>Ectopic expression</topic><topic>Epstein-Barr virus</topic><topic>Gastric cancer</topic><topic>Gene expression</topic><topic>Gene Expression Regulation, Viral</topic><topic>Genes</topic><topic>Genetic aspects</topic><topic>Genomes</topic><topic>Health aspects</topic><topic>HEK293 Cells</topic><topic>Herpesvirus 4, Human - genetics</topic><topic>Herpesviruses</topic><topic>Humans</topic><topic>Initiation complex</topic><topic>Internalization</topic><topic>Kinases</topic><topic>Kinetics</topic><topic>Mass spectrometry</topic><topic>Mass spectroscopy</topic><topic>Mutation</topic><topic>Pediatrics</topic><topic>Phosphorylation</topic><topic>Physical Sciences</topic><topic>Post-translation</topic><topic>Protein Binding</topic><topic>Proteins</topic><topic>RNA polymerase</topic><topic>Sequence Homology</topic><topic>Signal transduction</topic><topic>Spectroscopy</topic><topic>Stomach cancer</topic><topic>Structure</topic><topic>Tata box</topic><topic>Threonine</topic><topic>Threonine - chemistry</topic><topic>Threonine - genetics</topic><topic>Threonine - metabolism</topic><topic>Transcription</topic><topic>Transcription (Genetics)</topic><topic>Transcription, Genetic</topic><topic>Translation</topic><topic>Viral proteins</topic><topic>Viral Proteins - chemistry</topic><topic>Viral Proteins - genetics</topic><topic>Viral Proteins - metabolism</topic><topic>Virology</topic><topic>Virus Replication</topic><topic>Viruses</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Li, Jinlin</creatorcontrib><creatorcontrib>Walsh, Ann</creatorcontrib><creatorcontrib>Lam, TuKiet T</creatorcontrib><creatorcontrib>Delecluse, Henri-Jacques</creatorcontrib><creatorcontrib>El-Guindy, Ayman</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Gale In Context: Canada</collection><collection>Gale In Context: Science</collection><collection>ProQuest Central (Corporate)</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Virology and AIDS Abstracts</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Medical Database (Alumni Edition)</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest One Sustainability</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Biological Science Database</collection><collection>Publicly Available Content Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>PLoS pathogens</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Li, Jinlin</au><au>Walsh, Ann</au><au>Lam, TuKiet T</au><au>Delecluse, Henri-Jacques</au><au>El-Guindy, Ayman</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>A single phosphoacceptor residue in BGLF3 is essential for transcription of Epstein-Barr virus late genes</atitle><jtitle>PLoS pathogens</jtitle><addtitle>PLoS Pathog</addtitle><date>2019-08-28</date><risdate>2019</risdate><volume>15</volume><issue>8</issue><spage>e1007980</spage><epage>e1007980</epage><pages>e1007980-e1007980</pages><issn>1553-7374</issn><issn>1553-7366</issn><eissn>1553-7374</eissn><abstract>Almost one third of herpesvirus proteins are expressed with late kinetics. Many of these late proteins serve crucial structural functions such as formation of virus particles, attachment to host cells and internalization. Recently, we and others identified a group of Epstein-Barr virus early proteins that form a pre-initiation complex (vPIC) dedicated to transcription of late genes. Currently, there is a fundamental gap in understanding the role of post-translational modifications in regulating assembly and function of the complex. Here, we used mass spectrometry to map potential phosphorylation sites in BGLF3, a core component of the vPIC module that connects the BcRF1 viral TATA box binding protein to other components of the complex. We identified threonine 42 (T42) in BGLF3 as a phosphoacceptor residue. T42 is conserved in BGLF3 orthologs encoded by other gamma herpesviruses. Abolishing phosphorylation at T42 markedly reduced expression of vPIC-dependent late genes and disrupted production of new virus particles, but had no effect on early gene expression, viral DNA replication, or expression of vPIC-independent late genes. We complemented failure of BGLF3(T42A) to activate late gene expression by ectopic expression of other components of vPIC. Only BFRF2 and BVLF1 were sufficient to suppress the defect in late gene expression associated with BGLF3(T42A). These results were corroborated by the ability of wild type BGLF3 but not BGLF3(T42A) to form a trimeric complex with BFRF2 and BVLF1. Our findings suggest that phosphorylation of BGLF3 at threonine 42 serves as a new checkpoint for subsequent formation of BFRF2:BGLF3:BVLF1; a trimeric subcomplex essential for transcription of late genes. Our findings provide evidence that post-translational modifications regulate the function of the vPIC nanomachine that initiates synthesis of late transcripts in herpesviruses.</abstract><cop>United States</cop><pub>Public Library of Science</pub><pmid>31461506</pmid><doi>10.1371/journal.ppat.1007980</doi><orcidid>https://orcid.org/0000-0001-6118-6951</orcidid><orcidid>https://orcid.org/0000-0002-1744-6274</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Amino Acid Sequence Amino acids Binding sites Biology and Life Sciences Cell division Deoxyribonucleic acid DNA DNA biosynthesis DNA Replication DNA, Viral - genetics Ectopic expression Epstein-Barr virus Gastric cancer Gene expression Gene Expression Regulation, Viral Genes Genetic aspects Genomes Health aspects HEK293 Cells Herpesvirus 4, Human - genetics Herpesviruses Humans Initiation complex Internalization Kinases Kinetics Mass spectrometry Mass spectroscopy Mutation Pediatrics Phosphorylation Physical Sciences Post-translation Protein Binding Proteins RNA polymerase Sequence Homology Signal transduction Spectroscopy Stomach cancer Structure Tata box Threonine Threonine - chemistry Threonine - genetics Threonine - metabolism Transcription Transcription (Genetics) Transcription, Genetic Translation Viral proteins Viral Proteins - chemistry Viral Proteins - genetics Viral Proteins - metabolism Virology Virus Replication Viruses |
title | A single phosphoacceptor residue in BGLF3 is essential for transcription of Epstein-Barr virus late genes |
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