Mitocondrial COI and 16S rDNA sequences support morphological identification and biogeography of deep-sea red crabs of the genus Chaceon (Crustacea, Decapoda, Geryonidae) in the Eastern Central and South Atlantic Ocean

The geographical spreading of new fishing activities and the increasingly deeper locations of these activities have shown the worldwide distribution of gerionid crabs and new descriptions of Chaceon taxa. However, incomplete penetrance, variable expressivity, and phenotypic overlap make the morphome...

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Veröffentlicht in:PloS one 2019-02, Vol.14 (2), p.e0211717-e0211717
Hauptverfasser: Hernández, Mariano, Martín, M Virginia, Herrador-Gómez, Pedro M, Jiménez, Sebastián, Hernández-González, Carlos, Barreiro, Santiago, Sarralde, Roberto, van Zyl, Barend Johannes, Gamatham, Johny Charles, Almeida, Teresa, López-Abellán, Luis J
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container_title PloS one
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creator Hernández, Mariano
Martín, M Virginia
Herrador-Gómez, Pedro M
Jiménez, Sebastián
Hernández-González, Carlos
Barreiro, Santiago
Sarralde, Roberto
van Zyl, Barend Johannes
Gamatham, Johny Charles
Almeida, Teresa
López-Abellán, Luis J
description The geographical spreading of new fishing activities and the increasingly deeper locations of these activities have shown the worldwide distribution of gerionid crabs and new descriptions of Chaceon taxa. However, incomplete penetrance, variable expressivity, and phenotypic overlap make the morphometric identification of these species difficult. In this study, partial sequences of the cytochrome c oxidase subunit 1 (COI) and 16S mitochondrial ribosomal RNA (16S rRNA) genes have been analyzed in Chaceon species from the Eastern Central and South Atlantic and compared with sequences of species from Western Atlantic. Our results corroborate the proposed morphological species and highlight the significant separation of the Eastern Atlantic species and those from Atlantic coasts of South America for both markers (97% Bayesian posterior probability, BPP / 83% Bootstrap replicates, BT). Interestingly, Chaceon sanctaehelenae shows a closer relationship with the species of the American coast than with those from the Eastern Atlantic. On the other hand, while COI marker clearly separates Chaceon atopus and Chaceon erytheiae species (99 BPP / 91% BT), these species share haplotypes for the 16S rRNA marker, pointing to a recent speciation process. Moreover, a close relationship was observed between Chaceon maritae and Chaceon affinis (94% BPP / 77% BT). The topologies of the trees obtained indicate that the ancestor of this genus was closer related to those species from South America than to those from the Eastern Atlantic.
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Johannes</au><au>Gamatham, Johny Charles</au><au>Almeida, Teresa</au><au>López-Abellán, Luis J</au><au>Sawabe, Tomoo</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Mitocondrial COI and 16S rDNA sequences support morphological identification and biogeography of deep-sea red crabs of the genus Chaceon (Crustacea, Decapoda, Geryonidae) in the Eastern Central and South Atlantic Ocean</atitle><jtitle>PloS one</jtitle><addtitle>PLoS One</addtitle><date>2019-02-11</date><risdate>2019</risdate><volume>14</volume><issue>2</issue><spage>e0211717</spage><epage>e0211717</epage><pages>e0211717-e0211717</pages><issn>1932-6203</issn><eissn>1932-6203</eissn><abstract>The geographical spreading of new fishing activities and the increasingly deeper locations of these activities have shown the worldwide distribution of gerionid crabs and new descriptions of Chaceon taxa. However, incomplete penetrance, variable expressivity, and phenotypic overlap make the morphometric identification of these species difficult. In this study, partial sequences of the cytochrome c oxidase subunit 1 (COI) and 16S mitochondrial ribosomal RNA (16S rRNA) genes have been analyzed in Chaceon species from the Eastern Central and South Atlantic and compared with sequences of species from Western Atlantic. Our results corroborate the proposed morphological species and highlight the significant separation of the Eastern Atlantic species and those from Atlantic coasts of South America for both markers (97% Bayesian posterior probability, BPP / 83% Bootstrap replicates, BT). Interestingly, Chaceon sanctaehelenae shows a closer relationship with the species of the American coast than with those from the Eastern Atlantic. On the other hand, while COI marker clearly separates Chaceon atopus and Chaceon erytheiae species (99 BPP / 91% BT), these species share haplotypes for the 16S rRNA marker, pointing to a recent speciation process. Moreover, a close relationship was observed between Chaceon maritae and Chaceon affinis (94% BPP / 77% BT). The topologies of the trees obtained indicate that the ancestor of this genus was closer related to those species from South America than to those from the Eastern Atlantic.</abstract><cop>United States</cop><pub>Public Library of Science</pub><pmid>30742637</pmid><doi>10.1371/journal.pone.0211717</doi><orcidid>https://orcid.org/0000-0003-1219-0246</orcidid><orcidid>https://orcid.org/0000-0002-6831-4415</orcidid><orcidid>https://orcid.org/0000-0003-4435-2414</orcidid><oa>free_for_read</oa></addata></record>
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1932-6203
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subjects Animal Shells - anatomy & histology
Animals
Atlantic Ocean
Bayesian analysis
Biogeography
Biology and life sciences
Brachyura - anatomy & histology
Brachyura - genetics
Chaceon
Coastal environments
Computer and Information Sciences
Conditional probability
Crabs
Crustaceans
Cytochrome
Cytochrome c
Cytochrome oxidase
Cytochrome-c oxidase
Cytochromes
Decapoda
Decapods (Crustaceans)
Deep sea
Deep sea environments
DNA, Ribosomal - genetics
Earth Sciences
Ecology and Environmental Sciences
Electron Transport Complex IV - genetics
Female
Fisheries
Fishing
Fishing (Recreation)
Genes
Genetic aspects
Geography
Haplotypes
Identification
Male
Mitochondria
Mitochondrial Proteins - genetics
Morphology
Oceans
Oxidases
Phylogeny
Phylogeography
Physiological aspects
Research and Analysis Methods
Ribonucleic acid
Ribosomal RNA
RNA
RNA, Ribosomal, 16S - genetics
rRNA 16S
Speciation
Species
title Mitocondrial COI and 16S rDNA sequences support morphological identification and biogeography of deep-sea red crabs of the genus Chaceon (Crustacea, Decapoda, Geryonidae) in the Eastern Central and South Atlantic Ocean
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