The self-interaction of a nodavirus replicase is enhanced by mitochondrial membrane lipids
RNA replication of positive-strand (+)RNA viruses requires the protein-protein interactions among viral replicases and the association of viral replicases with intracellular membranes. Protein A from Wuhan nodavirus (WhNV), which closely associate with mitochondrial membranes, is the sole replicase...
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creator | Qiu, Yang Wang, Zhaowei Liu, Yongxiang Han, Yajuan Miao, Meng Qi, Nan Yang, Jie Xia, Hongjie Li, Xiaofeng Qin, Cheng-Feng Hu, Yuanyang Zhou, Xi |
description | RNA replication of positive-strand (+)RNA viruses requires the protein-protein interactions among viral replicases and the association of viral replicases with intracellular membranes. Protein A from Wuhan nodavirus (WhNV), which closely associate with mitochondrial membranes, is the sole replicase required for viral RNA replication. Here, we studied the direct effects of mitochondrial membrane lipids (MMLs) on WhNV protein A activity in vitro. Our investigations revealed the self-interaction of WhNV protein A is accomplished via two different patterns (i.e., homotypic and heterotypic self-interactions via different interfaces). MMLs stimulated the protein A self-interaction, and this stimulation exhibited selectivity for specific phospholipids. Moreover, we found that specific phospholipids differently favor the two self-interaction patterns. Furthermore, manipulating specific phospholipid metabolism affected protein A self-interaction and the activity of protein A to replicate RNA in cells. Taken together, our findings reveal the direct effects of membrane lipids on a nodaviral RNA replicase. |
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Protein A from Wuhan nodavirus (WhNV), which closely associate with mitochondrial membranes, is the sole replicase required for viral RNA replication. Here, we studied the direct effects of mitochondrial membrane lipids (MMLs) on WhNV protein A activity in vitro. Our investigations revealed the self-interaction of WhNV protein A is accomplished via two different patterns (i.e., homotypic and heterotypic self-interactions via different interfaces). MMLs stimulated the protein A self-interaction, and this stimulation exhibited selectivity for specific phospholipids. Moreover, we found that specific phospholipids differently favor the two self-interaction patterns. Furthermore, manipulating specific phospholipid metabolism affected protein A self-interaction and the activity of protein A to replicate RNA in cells. Taken together, our findings reveal the direct effects of membrane lipids on a nodaviral RNA replicase.</description><identifier>ISSN: 1932-6203</identifier><identifier>EISSN: 1932-6203</identifier><identifier>DOI: 10.1371/journal.pone.0089628</identifier><identifier>PMID: 24586921</identifier><language>eng</language><publisher>United States: Public Library of Science</publisher><subject>Biology ; Biosynthesis ; Drosophila ; Epidemiology ; Hepatitis ; Insects ; Interfaces ; Laboratories ; Life sciences ; Lipid metabolism ; Lipids ; Membrane Lipids - metabolism ; Membranes ; Metabolism ; Mitochondria ; Mitochondrial Membranes - metabolism ; Mutation ; Nodaviridae - physiology ; Pathogens ; Phospholipids ; Phospholipids - physiology ; Physiological aspects ; Plasmids ; Protein A ; Protein interaction ; Protein turnover ; Protein-protein interactions ; Proteins ; Replicase ; Replication ; Ribonucleic acid ; RNA ; RNA polymerase ; RNA Replicase - metabolism ; RNA viruses ; RNA-directed RNA polymerase ; Selectivity ; Viral Proteins - metabolism ; Virology ; Virus replication ; Virus Replication - physiology ; Viruses</subject><ispartof>PloS one, 2014-02, Vol.9 (2), p.e89628-e89628</ispartof><rights>COPYRIGHT 2014 Public Library of Science</rights><rights>2014 Qiu et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>2014 Qiu et al 2014 Qiu et al</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c692t-60fd1f7cf5b6d9cf3215ecb2a7050b9767b79e37a87084bbc1872b9930f51993</citedby><cites>FETCH-LOGICAL-c692t-60fd1f7cf5b6d9cf3215ecb2a7050b9767b79e37a87084bbc1872b9930f51993</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3934934/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3934934/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,723,776,780,860,881,2096,2915,23845,27901,27902,53766,53768,79342,79343</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/24586921$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Qiu, Yang</creatorcontrib><creatorcontrib>Wang, Zhaowei</creatorcontrib><creatorcontrib>Liu, Yongxiang</creatorcontrib><creatorcontrib>Han, Yajuan</creatorcontrib><creatorcontrib>Miao, Meng</creatorcontrib><creatorcontrib>Qi, Nan</creatorcontrib><creatorcontrib>Yang, Jie</creatorcontrib><creatorcontrib>Xia, Hongjie</creatorcontrib><creatorcontrib>Li, Xiaofeng</creatorcontrib><creatorcontrib>Qin, Cheng-Feng</creatorcontrib><creatorcontrib>Hu, Yuanyang</creatorcontrib><creatorcontrib>Zhou, Xi</creatorcontrib><title>The self-interaction of a nodavirus replicase is enhanced by mitochondrial membrane lipids</title><title>PloS one</title><addtitle>PLoS One</addtitle><description>RNA replication of positive-strand (+)RNA viruses requires the protein-protein interactions among viral replicases and the association of viral replicases with intracellular membranes. Protein A from Wuhan nodavirus (WhNV), which closely associate with mitochondrial membranes, is the sole replicase required for viral RNA replication. Here, we studied the direct effects of mitochondrial membrane lipids (MMLs) on WhNV protein A activity in vitro. Our investigations revealed the self-interaction of WhNV protein A is accomplished via two different patterns (i.e., homotypic and heterotypic self-interactions via different interfaces). MMLs stimulated the protein A self-interaction, and this stimulation exhibited selectivity for specific phospholipids. Moreover, we found that specific phospholipids differently favor the two self-interaction patterns. Furthermore, manipulating specific phospholipid metabolism affected protein A self-interaction and the activity of protein A to replicate RNA in cells. Taken together, our findings reveal the direct effects of membrane lipids on a nodaviral RNA replicase.</description><subject>Biology</subject><subject>Biosynthesis</subject><subject>Drosophila</subject><subject>Epidemiology</subject><subject>Hepatitis</subject><subject>Insects</subject><subject>Interfaces</subject><subject>Laboratories</subject><subject>Life sciences</subject><subject>Lipid metabolism</subject><subject>Lipids</subject><subject>Membrane Lipids - metabolism</subject><subject>Membranes</subject><subject>Metabolism</subject><subject>Mitochondria</subject><subject>Mitochondrial Membranes - metabolism</subject><subject>Mutation</subject><subject>Nodaviridae - physiology</subject><subject>Pathogens</subject><subject>Phospholipids</subject><subject>Phospholipids - physiology</subject><subject>Physiological aspects</subject><subject>Plasmids</subject><subject>Protein A</subject><subject>Protein interaction</subject><subject>Protein turnover</subject><subject>Protein-protein interactions</subject><subject>Proteins</subject><subject>Replicase</subject><subject>Replication</subject><subject>Ribonucleic acid</subject><subject>RNA</subject><subject>RNA polymerase</subject><subject>RNA Replicase - metabolism</subject><subject>RNA viruses</subject><subject>RNA-directed RNA polymerase</subject><subject>Selectivity</subject><subject>Viral Proteins - metabolism</subject><subject>Virology</subject><subject>Virus replication</subject><subject>Virus Replication - physiology</subject><subject>Viruses</subject><issn>1932-6203</issn><issn>1932-6203</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2014</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>BENPR</sourceid><sourceid>DOA</sourceid><recordid>eNqNk12L1DAUhoso7rr6D0QLgujFjPlomvZGWJZVBxYWdPDCm5CmJ9MMaTIm7eL--8043WUqeyENJCTPeU_y9pwse43RElOOP239GJy0y513sESoqktSPclOcU3JoiSIPj1an2QvYtwixGhVls-zE1KwqqwJPs1-rTvII1i9MG6AINVgvMu9zmXufCtvTBhjHmBnjZIRchNzcJ10Ctq8uc17M3jVedcGI23eQ98E6SC3Zmfa-DJ7pqWN8Gqaz7L1l8v1xbfF1fXX1cX51UKlKwyLEukWa640a8q2VpoSzEA1RHLEUFPzkje8BsplxVFVNI3CFSdNXVOkGU7TWfb2ILuzPorJlShwzTljFaFVIlYHovVyK3bB9DLcCi-N-Lvhw0bIMBhlQZSAAVgBSDFVMNApHnOKUamYJqjASevzlG1semgVuCFIOxOdnzjTiY2_EbSmRRpJ4MMkEPzvEeIgehMVWJuM82O6N0tpGMIFSei7f9DHXzdRG5keYJz2Ka_ai4rzgle8JpzuXVo-QqWvhd6oVELapP1ZwMdZQGIG-DNs5BijWP34_v_s9c85-_6I7UDaoYvejvu6i3OwOIAq-BgD6AeTMRL7Drh3Q-w7QEwdkMLeHP-gh6D7kqd38cEAfg</recordid><startdate>20140225</startdate><enddate>20140225</enddate><creator>Qiu, Yang</creator><creator>Wang, Zhaowei</creator><creator>Liu, Yongxiang</creator><creator>Han, Yajuan</creator><creator>Miao, Meng</creator><creator>Qi, Nan</creator><creator>Yang, Jie</creator><creator>Xia, Hongjie</creator><creator>Li, Xiaofeng</creator><creator>Qin, Cheng-Feng</creator><creator>Hu, Yuanyang</creator><creator>Zhou, Xi</creator><general>Public Library of Science</general><general>Public Library of Science (PLoS)</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>IOV</scope><scope>ISR</scope><scope>3V.</scope><scope>7QG</scope><scope>7QL</scope><scope>7QO</scope><scope>7RV</scope><scope>7SN</scope><scope>7SS</scope><scope>7T5</scope><scope>7TG</scope><scope>7TM</scope><scope>7U9</scope><scope>7X2</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8AO</scope><scope>8C1</scope><scope>8FD</scope><scope>8FE</scope><scope>8FG</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABJCF</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>ARAPS</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BGLVJ</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>D1I</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>KB.</scope><scope>KB0</scope><scope>KL.</scope><scope>L6V</scope><scope>LK8</scope><scope>M0K</scope><scope>M0S</scope><scope>M1P</scope><scope>M7N</scope><scope>M7P</scope><scope>M7S</scope><scope>NAPCQ</scope><scope>P5Z</scope><scope>P62</scope><scope>P64</scope><scope>PATMY</scope><scope>PDBOC</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>PTHSS</scope><scope>PYCSY</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope></search><sort><creationdate>20140225</creationdate><title>The self-interaction of a nodavirus replicase is enhanced by mitochondrial membrane lipids</title><author>Qiu, Yang ; Wang, Zhaowei ; Liu, Yongxiang ; Han, Yajuan ; Miao, Meng ; Qi, Nan ; Yang, Jie ; Xia, Hongjie ; Li, Xiaofeng ; Qin, Cheng-Feng ; Hu, Yuanyang ; Zhou, Xi</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c692t-60fd1f7cf5b6d9cf3215ecb2a7050b9767b79e37a87084bbc1872b9930f51993</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2014</creationdate><topic>Biology</topic><topic>Biosynthesis</topic><topic>Drosophila</topic><topic>Epidemiology</topic><topic>Hepatitis</topic><topic>Insects</topic><topic>Interfaces</topic><topic>Laboratories</topic><topic>Life sciences</topic><topic>Lipid metabolism</topic><topic>Lipids</topic><topic>Membrane Lipids - 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Protein A from Wuhan nodavirus (WhNV), which closely associate with mitochondrial membranes, is the sole replicase required for viral RNA replication. Here, we studied the direct effects of mitochondrial membrane lipids (MMLs) on WhNV protein A activity in vitro. Our investigations revealed the self-interaction of WhNV protein A is accomplished via two different patterns (i.e., homotypic and heterotypic self-interactions via different interfaces). MMLs stimulated the protein A self-interaction, and this stimulation exhibited selectivity for specific phospholipids. Moreover, we found that specific phospholipids differently favor the two self-interaction patterns. Furthermore, manipulating specific phospholipid metabolism affected protein A self-interaction and the activity of protein A to replicate RNA in cells. Taken together, our findings reveal the direct effects of membrane lipids on a nodaviral RNA replicase.</abstract><cop>United States</cop><pub>Public Library of Science</pub><pmid>24586921</pmid><doi>10.1371/journal.pone.0089628</doi><tpages>e89628</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Biology Biosynthesis Drosophila Epidemiology Hepatitis Insects Interfaces Laboratories Life sciences Lipid metabolism Lipids Membrane Lipids - metabolism Membranes Metabolism Mitochondria Mitochondrial Membranes - metabolism Mutation Nodaviridae - physiology Pathogens Phospholipids Phospholipids - physiology Physiological aspects Plasmids Protein A Protein interaction Protein turnover Protein-protein interactions Proteins Replicase Replication Ribonucleic acid RNA RNA polymerase RNA Replicase - metabolism RNA viruses RNA-directed RNA polymerase Selectivity Viral Proteins - metabolism Virology Virus replication Virus Replication - physiology Viruses |
title | The self-interaction of a nodavirus replicase is enhanced by mitochondrial membrane lipids |
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