Deep sequencing of near full-length HIV-1 genomes from plasma identifies circulating subtype C and infrequent occurrence of AC recombinant form in Southern India

India has the third largest number of HIV-1-infected individuals accounting for approximately 2.1 million people, with a predominance of circulating subtype C strains and a low prevalence of subtype A and A1C and BC recombinant forms, identified over the past two decades. Recovery of near full-lengt...

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Veröffentlicht in:	PloS one 2017-12, Vol.12 (12), p.e0188603-e0188603
Hauptverfasser:	Alampalli, Shuba Varshini, Thomson, Michael M, Sampathkumar, Raghavan, Sivaraman, Karthi, U K J, Anto Jesuraj, Dhar, Chirag, D Souza, George, Berry, Neil, Vyakarnam, Annapurna
Format:	Artikel
Sprache:	eng
Schlagworte:	Acquired immune deficiency syndrome AIDS Algorithms Analysis Biology and Life Sciences Computer and Information Sciences Distribution DNA sequencing Drug resistance Gag protein Gene sequencing Genetic aspects Genomes Genomics Geography HIV HIV (Viruses) Human immunodeficiency virus Medicine and Health Sciences Nucleotide sequencing Pandemics Phylogeny Recovery Research and Analysis Methods Tuberculosis Viruses
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